RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
TPM3-204ENST00000323144 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 S100A12P80511 92 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.3
TPM3-204ENST00000323144 NDUFC2O95298 119 aa6.89□□□□□ -1.31
TPM3-204ENST00000323144 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
TPM3-204ENST00000323144 SMCPP49901 116 aaPredicted RBP6.88□□□□□ -1.31
TPM3-204ENST00000323144 E9PLD3 99 aa6.87□□□□□ -1.31
TPM3-204ENST00000323144 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
TPM3-204ENST00000323144 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
TPM3-204ENST00000323144 LITAFQ99732 161 aa6.87□□□□□ -1.31
TPM3-204ENST00000323144 COLCA2A8K830 154 aa6.86□□□□□ -1.31
TPM3-204ENST00000323144 XP32Q5T750 250 aa6.84□□□□□ -1.31
TPM3-204ENST00000323144 SSBP3-AS1Q7Z2R9 100 aa6.84□□□□□ -1.31
TPM3-204ENST00000323144 TTTY13Q9BZ97 58 aa6.84□□□□□ -1.31
TPM3-204ENST00000323144 SLC25A20O43772 301 aa6.83□□□□□ -1.32
TPM3-204ENST00000323144 JOSD1Q15040 202 aaPredicted RBP6.83□□□□□ -1.32
TPM3-204ENST00000323144 LINC00308Q8TCZ7 52 aa6.83□□□□□ -1.32
TPM3-204ENST00000323144 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
TPM3-204ENST00000323144 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
TPM3-204ENST00000323144 SPANXCQ9NY87 97 aa6.82□□□□□ -1.32
TPM3-204ENST00000323144 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
TPM3-204ENST00000323144 ZNF815PA8K554 130 aa6.8□□□□□ -1.32
TPM3-204ENST00000323144 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
TPM3-204ENST00000323144 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
TPM3-204ENST00000323144 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
TPM3-204ENST00000323144 TIMM17BO60830 172 aa6.79□□□□□ -1.32
TPM3-204ENST00000323144 SPRR1BP22528 89 aa6.79□□□□□ -1.32
TPM3-204ENST00000323144 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
TPM3-204ENST00000323144 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
TPM3-204ENST00000323144 LINC01547P58512 204 aaPredicted RBP6.77□□□□□ -1.33
TPM3-204ENST00000323144 C6orf99Q4VX62 202 aa6.77□□□□□ -1.33
TPM3-204ENST00000323144 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
TPM3-204ENST00000323144 Q1RN00 199 aa6.76□□□□□ -1.33
TPM3-204ENST00000323144 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 C5orf52A6NGY3 159 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 COX7BP24311 80 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
TPM3-204ENST00000323144 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 PET117Q6UWS5 81 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 LIMD2Q9BT23 127 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
TPM3-204ENST00000323144 CBY1Q9Y3M2 126 aa6.74□□□□□ -1.33
TPM3-204ENST00000323144 A6NJY4 79 aa6.73□□□□□ -1.33
TPM3-204ENST00000323144 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
TPM3-204ENST00000323144 A0A0G2JQZ4 141 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 H7C2G1 150 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 KRTDAPP60985 99 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 DEFB105AQ8NG35 78 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
TPM3-204ENST00000323144 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
TPM3-204ENST00000323144 ATOH7Q8N100 152 aa6.71□□□□□ -1.34
TPM3-204ENST00000323144 SCGB1D4Q6XE38 83 aa6.7□□□□□ -1.34
TPM3-204ENST00000323144 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
TPM3-204ENST00000323144 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
TPM3-204ENST00000323144 MT1HP80294 61 aa6.68□□□□□ -1.34
TPM3-204ENST00000323144 TAL2Q16559 108 aa6.68□□□□□ -1.34
TPM3-204ENST00000323144 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
TPM3-204ENST00000323144 TEX49A0A1B0GTD5 131 aa6.67□□□□□ -1.34
TPM3-204ENST00000323144 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
TPM3-204ENST00000323144 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
TPM3-204ENST00000323144 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
TPM3-204ENST00000323144 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
TPM3-204ENST00000323144 A6NDN8 102 aa6.66□□□□□ -1.34
TPM3-204ENST00000323144 CD164Q04900 197 aa6.66□□□□□ -1.34
TPM3-204ENST00000323144 PRO1933Q9H354 126 aa6.66□□□□□ -1.34
TPM3-204ENST00000323144 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
TPM3-204ENST00000323144 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
TPM3-204ENST00000323144 C20orf202A1L168 122 aa6.64□□□□□ -1.35
TPM3-204ENST00000323144 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
TPM3-204ENST00000323144 IFITM1P13164 125 aa6.63□□□□□ -1.35
TPM3-204ENST00000323144 SMIM11BQ8TCY0 68 aa6.63□□□□□ -1.35
TPM3-204ENST00000323144 Q5XG85 94 aa6.62□□□□□ -1.35
TPM3-204ENST00000323144 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
TPM3-204ENST00000323144 AKR1D1P51857 326 aa6.6□□□□□ -1.35
TPM3-204ENST00000323144 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
TPM3-204ENST00000323144 Q6ZVH6 145 aa6.59□□□□□ -1.35
TPM3-204ENST00000323144 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
TPM3-204ENST00000323144 TRAV13-2A0A0B4J235 113 aa6.57□□□□□ -1.36
TPM3-204ENST00000323144 NHP2Q9NX24 153 aaKnown RBP6.57□□□□□ -1.36
TPM3-204ENST00000323144 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
TPM3-204ENST00000323144 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
TPM3-204ENST00000323144 A4D1N5 150 aa6.56□□□□□ -1.36
TPM3-204ENST00000323144 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms