RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 LRCOL1A6NCL2 159 aa10.71□□□□□ -0.69
CRAT-201ENST00000318080 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.7
CRAT-201ENST00000318080 MDFIQ99750 246 aa10.7□□□□□ -0.7
CRAT-201ENST00000318080 TMEM254Q8TBM7 123 aa10.69□□□□□ -0.7
CRAT-201ENST00000318080 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
CRAT-201ENST00000318080 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
CRAT-201ENST00000318080 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
CRAT-201ENST00000318080 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
CRAT-201ENST00000318080 DNHD1Q96M86 4753 aa10.66□□□□□ -0.7
CRAT-201ENST00000318080 C3orf84H3BNL1 204 aa10.66□□□□□ -0.7
CRAT-201ENST00000318080 CXCL6P80162 114 aa10.65□□□□□ -0.7
CRAT-201ENST00000318080 C9orf66Q5T8R8 295 aa10.65□□□□□ -0.7
CRAT-201ENST00000318080 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.7
CRAT-201ENST00000318080 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
CRAT-201ENST00000318080 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
CRAT-201ENST00000318080 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
CRAT-201ENST00000318080 ZNF73O43830 326 aaPredicted RBP10.62□□□□□ -0.71
CRAT-201ENST00000318080 Q8NAQ8 132 aa10.62□□□□□ -0.71
CRAT-201ENST00000318080 DIRC1Q969H9 104 aa10.62□□□□□ -0.71
CRAT-201ENST00000318080 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
CRAT-201ENST00000318080 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
CRAT-201ENST00000318080 LELP1Q5T871 98 aa10.61□□□□□ -0.71
CRAT-201ENST00000318080 DEFB105AQ8NG35 78 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 BCE1O60756 84 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 IGKV4-1P06312 121 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 COX7BP24311 80 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 CD164Q04900 197 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
CRAT-201ENST00000318080 PRR15Q8IV56 129 aa10.59□□□□□ -0.71
CRAT-201ENST00000318080 TENM3Q9P273 2699 aa10.58□□□□□ -0.72
CRAT-201ENST00000318080 PRYO14603 147 aa10.57□□□□□ -0.72
CRAT-201ENST00000318080 Q6ZRU5 148 aa10.57□□□□□ -0.72
CRAT-201ENST00000318080 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
CRAT-201ENST00000318080 GVQW2A0A096LPI5 108 aaPredicted RBP10.56□□□□□ -0.72
CRAT-201ENST00000318080 NDUFC1O43677 76 aa10.56□□□□□ -0.72
CRAT-201ENST00000318080 VPREB1P12018 145 aa10.56□□□□□ -0.72
CRAT-201ENST00000318080 FUSP35637 526 aaKnown RBP eCLIP10.56□□□□□ -0.72
CRAT-201ENST00000318080 PRR4Q16378 134 aa10.56□□□□□ -0.72
CRAT-201ENST00000318080 ESRGQ1W209 222 aa10.55□□□□□ -0.72
CRAT-201ENST00000318080 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
CRAT-201ENST00000318080 ATP5EP56381 51 aaPredicted RBP10.54□□□□□ -0.72
CRAT-201ENST00000318080 OCR1Q9BZK8 76 aa10.54□□□□□ -0.72
CRAT-201ENST00000318080 SPART-AS1P0CW21 52 aa10.54□□□□□ -0.72
CRAT-201ENST00000318080 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
CRAT-201ENST00000318080 PDE6GP18545 87 aa10.54□□□□□ -0.72
CRAT-201ENST00000318080 Q6ZTC4 211 aa10.54□□□□□ -0.72
CRAT-201ENST00000318080 APOC4P55056 127 aa10.53□□□□□ -0.72
CRAT-201ENST00000318080 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
CRAT-201ENST00000318080 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
CRAT-201ENST00000318080 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
CRAT-201ENST00000318080 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
CRAT-201ENST00000318080 A8MU10 97 aa10.48□□□□□ -0.73
CRAT-201ENST00000318080 PSPHP1O15172 72 aa10.48□□□□□ -0.73
CRAT-201ENST00000318080 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
CRAT-201ENST00000318080 Q6ZRP5 223 aa10.48□□□□□ -0.73
CRAT-201ENST00000318080 M0R378 163 aa10.47□□□□□ -0.73
CRAT-201ENST00000318080 EGFEM1PQ0D2K5 195 aa10.46□□□□□ -0.73
CRAT-201ENST00000318080 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
CRAT-201ENST00000318080 MRPL55Q7Z7F7 128 aaKnown RBP10.45□□□□□ -0.74
CRAT-201ENST00000318080 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
CRAT-201ENST00000318080 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
CRAT-201ENST00000318080 H3BQ85 93 aa10.44□□□□□ -0.74
CRAT-201ENST00000318080 KPRPQ5T749 579 aaPredicted RBP10.44□□□□□ -0.74
CRAT-201ENST00000318080 SERTAD4-AS1Q5TG53 156 aa10.42□□□□□ -0.74
CRAT-201ENST00000318080 DEFB116Q30KQ4 102 aa10.41□□□□□ -0.74
CRAT-201ENST00000318080 C1orf64Q8NEQ6 169 aa10.41□□□□□ -0.74
CRAT-201ENST00000318080 Q8N377 158 aa10.41□□□□□ -0.74
CRAT-201ENST00000318080 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
CRAT-201ENST00000318080 HUWE1Q7Z6Z7 4374 aaKnown RBP10.39□□□□□ -0.75
CRAT-201ENST00000318080 RPL37AP8A6NKH3 93 aa10.39□□□□□ -0.75
CRAT-201ENST00000318080 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
CRAT-201ENST00000318080 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
CRAT-201ENST00000318080 MEGF8Q7Z7M0 2845 aa10.38□□□□□ -0.75
CRAT-201ENST00000318080 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
CRAT-201ENST00000318080 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
CRAT-201ENST00000318080 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
CRAT-201ENST00000318080 K7EIL1 84 aa10.37□□□□□ -0.75
CRAT-201ENST00000318080 C7orf33Q8WU49 177 aa10.37□□□□□ -0.75
CRAT-201ENST00000318080 PRKDCP78527 4128 aaKnown RBP10.36□□□□□ -0.75
CRAT-201ENST00000318080 H3BS24 57 aa10.36□□□□□ -0.75
CRAT-201ENST00000318080 FAM168BA1KXE4 195 aa10.36□□□□□ -0.75
CRAT-201ENST00000318080 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
CRAT-201ENST00000318080 K7EQZ3 153 aa10.35□□□□□ -0.75
CRAT-201ENST00000318080 Q1T7F1 81 aa10.34□□□□□ -0.75
CRAT-201ENST00000318080 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
CRAT-201ENST00000318080 SYCNQ0VAF6 134 aa10.34□□□□□ -0.75
CRAT-201ENST00000318080 DNAH9Q9NYC9 4486 aa10.33□□□□□ -0.76
CRAT-201ENST00000318080 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
CRAT-201ENST00000318080 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
CRAT-201ENST00000318080 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
CRAT-201ENST00000318080 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.32□□□□□ -0.76
CRAT-201ENST00000318080 Q9BRP9 147 aa10.32□□□□□ -0.76
CRAT-201ENST00000318080 A8MUN3 132 aa10.31□□□□□ -0.76
CRAT-201ENST00000318080 DSCR10P59022 87 aa10.31□□□□□ -0.76
CRAT-201ENST00000318080 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
CRAT-201ENST00000318080 CASC10Q5T4H9 136 aa10.3□□□□□ -0.76
CRAT-201ENST00000318080 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
CRAT-201ENST00000318080 KRTAP7-1Q8IUC3 87 aa10.28□□□□□ -0.76
CRAT-201ENST00000318080 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.76
CRAT-201ENST00000318080 KTN1-AS1Q86SY8 53 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms