RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
SERF1A-201ENST00000317633 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.61
SERF1A-201ENST00000317633 KRTAP9-6A0A140TA67 174 aa11.21□□□□□ -0.61
SERF1A-201ENST00000317633 TRGC2P03986 189 aa11.21□□□□□ -0.61
SERF1A-201ENST00000317633 A6NJY4 79 aa11.2□□□□□ -0.62
SERF1A-201ENST00000317633 SERF1AO75920 110 aa11.2□□□□□ -0.62
SERF1A-201ENST00000317633 IGKCP01834 107 aa11.2□□□□□ -0.62
SERF1A-201ENST00000317633 C9orf153Q5TBE3 101 aa11.2□□□□□ -0.62
SERF1A-201ENST00000317633 CBY1Q9Y3M2 126 aa11.19□□□□□ -0.62
SERF1A-201ENST00000317633 ZNF73O43830 326 aaPredicted RBP11.18□□□□□ -0.62
SERF1A-201ENST00000317633 FABP4P15090 132 aa11.18□□□□□ -0.62
SERF1A-201ENST00000317633 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
SERF1A-201ENST00000317633 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
SERF1A-201ENST00000317633 LINC00310P59036 64 aa11.17□□□□□ -0.62
SERF1A-201ENST00000317633 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
SERF1A-201ENST00000317633 KRTAP4-1Q9BYQ7 146 aa11.16□□□□□ -0.62
SERF1A-201ENST00000317633 NPC2P61916 151 aa11.15□□□□□ -0.62
SERF1A-201ENST00000317633 XP32Q5T750 250 aa11.15□□□□□ -0.62
SERF1A-201ENST00000317633 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
SERF1A-201ENST00000317633 SOSTDC1Q6X4U4 206 aa11.13□□□□□ -0.63
SERF1A-201ENST00000317633 ADAMTSL4-AS1Q5T5F5 129 aa11.12□□□□□ -0.63
SERF1A-201ENST00000317633 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
SERF1A-201ENST00000317633 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
SERF1A-201ENST00000317633 E9PLD3 99 aa11.1□□□□□ -0.63
SERF1A-201ENST00000317633 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
SERF1A-201ENST00000317633 LIMD2Q9BT23 127 aa11.09□□□□□ -0.63
SERF1A-201ENST00000317633 SPANXCQ9NY87 97 aa11.08□□□□□ -0.64
SERF1A-201ENST00000317633 DHRS4-AS1Q9P1J3 65 aa11.08□□□□□ -0.64
SERF1A-201ENST00000317633 SPRR1BP22528 89 aa11.07□□□□□ -0.64
SERF1A-201ENST00000317633 OR13C6PQ8NH95 151 aa11.07□□□□□ -0.64
SERF1A-201ENST00000317633 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
SERF1A-201ENST00000317633 LAMTOR3Q9UHA4 124 aa11.05□□□□□ -0.64
SERF1A-201ENST00000317633 TIMM17BO60830 172 aa11.03□□□□□ -0.64
SERF1A-201ENST00000317633 HRCT1Q6UXD1 115 aa11.02□□□□□ -0.65
SERF1A-201ENST00000317633 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
SERF1A-201ENST00000317633 LITAFQ99732 161 aa11.01□□□□□ -0.65
SERF1A-201ENST00000317633 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
SERF1A-201ENST00000317633 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
SERF1A-201ENST00000317633 COLCA2A8K830 154 aa10.99□□□□□ -0.65
SERF1A-201ENST00000317633 COX7BP24311 80 aa10.98□□□□□ -0.65
SERF1A-201ENST00000317633 ELOF1P60002 83 aaKnown RBP10.97□□□□□ -0.65
SERF1A-201ENST00000317633 TAL2Q16559 108 aa10.97□□□□□ -0.65
SERF1A-201ENST00000317633 ZNF815PA8K554 130 aa10.96□□□□□ -0.65
SERF1A-201ENST00000317633 CD164Q04900 197 aa10.96□□□□□ -0.65
SERF1A-201ENST00000317633 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
SERF1A-201ENST00000317633 C6orf99Q4VX62 202 aa10.95□□□□□ -0.66
SERF1A-201ENST00000317633 PCOTHQ58A44 107 aa10.95□□□□□ -0.66
SERF1A-201ENST00000317633 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
SERF1A-201ENST00000317633 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
SERF1A-201ENST00000317633 IGLV8-61A0A075B6I0 122 aa10.94□□□□□ -0.66
SERF1A-201ENST00000317633 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
SERF1A-201ENST00000317633 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
SERF1A-201ENST00000317633 Q1RN00 199 aa10.93□□□□□ -0.66
SERF1A-201ENST00000317633 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
SERF1A-201ENST00000317633 TRBV7-6A0A0J9YX20 115 aa10.91□□□□□ -0.66
SERF1A-201ENST00000317633 H7C2G1 150 aa10.91□□□□□ -0.66
SERF1A-201ENST00000317633 COPS9Q8WXC6 57 aa10.9□□□□□ -0.66
SERF1A-201ENST00000317633 HIST1H2BKO60814 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BJP06899 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BOP23527 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BBP33778 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 AKR1D1P51857 326 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BDP58876 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BCP62807 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST2H2BEQ16778 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BHQ93079 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BNQ99877 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 HIST1H2BMQ99879 126 aa10.89□□□□□ -0.67
SERF1A-201ENST00000317633 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
SERF1A-201ENST00000317633 A0A1B0GWB2 263 aa10.87□□□□□ -0.67
SERF1A-201ENST00000317633 KRTAP19-2Q3LHN2 52 aa10.87□□□□□ -0.67
SERF1A-201ENST00000317633 Q5XG85 94 aa10.87□□□□□ -0.67
SERF1A-201ENST00000317633 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
SERF1A-201ENST00000317633 SLC7A5P1Q8MH63 180 aa10.87□□□□□ -0.67
SERF1A-201ENST00000317633 CFC1BP0CG36 223 aa10.86□□□□□ -0.67
SERF1A-201ENST00000317633 IFITM1P13164 125 aa10.84□□□□□ -0.67
SERF1A-201ENST00000317633 MT1HP80294 61 aa10.84□□□□□ -0.67
SERF1A-201ENST00000317633 CRCT1Q9UGL9 99 aa10.84□□□□□ -0.67
SERF1A-201ENST00000317633 A6NDN8 102 aa10.83□□□□□ -0.68
SERF1A-201ENST00000317633 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
SERF1A-201ENST00000317633 SMIM29Q86T20 159 aa10.83□□□□□ -0.68
SERF1A-201ENST00000317633 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
SERF1A-201ENST00000317633 A4D1N5 150 aa10.82□□□□□ -0.68
SERF1A-201ENST00000317633 Q6ZVH6 145 aa10.82□□□□□ -0.68
SERF1A-201ENST00000317633 C1orf195Q5TG92 126 aa10.81□□□□□ -0.68
SERF1A-201ENST00000317633 NHP2Q9NX24 153 aaKnown RBP10.8□□□□□ -0.68
SERF1A-201ENST00000317633 KRTDAPP60985 99 aa10.79□□□□□ -0.68
SERF1A-201ENST00000317633 C20orf202A1L168 122 aa10.78□□□□□ -0.68
SERF1A-201ENST00000317633 TCL1BO95988 128 aa10.76□□□□□ -0.69
SERF1A-201ENST00000317633 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
SERF1A-201ENST00000317633 MUSTN1Q8IVN3 82 aa10.76□□□□□ -0.69
SERF1A-201ENST00000317633 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
SERF1A-201ENST00000317633 A0A0G2JQZ4 141 aa10.74□□□□□ -0.69
SERF1A-201ENST00000317633 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
SERF1A-201ENST00000317633 FSIP2Q5CZC0 6907 aa10.74□□□□□ -0.69
SERF1A-201ENST00000317633 COA6Q5JTJ3 125 aaKnown RBP10.73□□□□□ -0.69
SERF1A-201ENST00000317633 F8WEM9 126 aa10.71□□□□□ -0.69
SERF1A-201ENST00000317633 M0R2T5 61 aa10.7□□□□□ -0.7
SERF1A-201ENST00000317633 COX6B2Q6YFQ2 88 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms