RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
SCAMP4-201ENST00000316097 DEFB131BA0A096LNP1 70 aa11.42□□□□□ -0.58
SCAMP4-201ENST00000316097 H3BQ85 93 aa11.42□□□□□ -0.58
SCAMP4-201ENST00000316097 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
SCAMP4-201ENST00000316097 COX7BP24311 80 aa11.41□□□□□ -0.58
SCAMP4-201ENST00000316097 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
SCAMP4-201ENST00000316097 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
SCAMP4-201ENST00000316097 LELP1Q5T871 98 aa11.4□□□□□ -0.59
SCAMP4-201ENST00000316097 KLK12Q9UKR0 248 aa11.4□□□□□ -0.59
SCAMP4-201ENST00000316097 FP248Q71RG6 208 aaPredicted RBP11.39□□□□□ -0.59
SCAMP4-201ENST00000316097 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
SCAMP4-201ENST00000316097 WFDC10BQ8IUB3 73 aa11.39□□□□□ -0.59
SCAMP4-201ENST00000316097 SMIM26A0A096LP01 95 aa11.38□□□□□ -0.59
SCAMP4-201ENST00000316097 NREPQ16612 68 aa11.38□□□□□ -0.59
SCAMP4-201ENST00000316097 ESRGQ1W209 222 aa11.38□□□□□ -0.59
SCAMP4-201ENST00000316097 ELOF1P60002 83 aaKnown RBP11.37□□□□□ -0.59
SCAMP4-201ENST00000316097 NDUFC1O43677 76 aa11.36□□□□□ -0.59
SCAMP4-201ENST00000316097 Q8N9L7 120 aa11.36□□□□□ -0.59
SCAMP4-201ENST00000316097 TRBV7-6A0A0J9YX20 115 aa11.36□□□□□ -0.59
SCAMP4-201ENST00000316097 BPY2O14599 106 aa11.36□□□□□ -0.59
SCAMP4-201ENST00000316097 DNHD1Q96M86 4753 aa11.36□□□□□ -0.59
SCAMP4-201ENST00000316097 STAB2Q8WWQ8 2551 aa11.35□□□□□ -0.59
SCAMP4-201ENST00000316097 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
SCAMP4-201ENST00000316097 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
SCAMP4-201ENST00000316097 TMEM254Q8TBM7 123 aa11.34□□□□□ -0.59
SCAMP4-201ENST00000316097 PRO0628Q9UI54 55 aa11.34□□□□□ -0.59
SCAMP4-201ENST00000316097 PRR34Q9NV39 138 aa11.33□□□□□ -0.6
SCAMP4-201ENST00000316097 H3BNG1 76 aa11.32□□□□□ -0.6
SCAMP4-201ENST00000316097 VPREB1P12018 145 aa11.3□□□□□ -0.6
SCAMP4-201ENST00000316097 ATP5EP56381 51 aaPredicted RBP11.3□□□□□ -0.6
SCAMP4-201ENST00000316097 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
SCAMP4-201ENST00000316097 DNAH9Q9NYC9 4486 aa11.29□□□□□ -0.6
SCAMP4-201ENST00000316097 IGKV4-1P06312 121 aa11.29□□□□□ -0.6
SCAMP4-201ENST00000316097 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
SCAMP4-201ENST00000316097 LYSTQ99698 3801 aa11.27□□□□□ -0.61
SCAMP4-201ENST00000316097 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.61
SCAMP4-201ENST00000316097 M0R378 163 aa11.26□□□□□ -0.61
SCAMP4-201ENST00000316097 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
SCAMP4-201ENST00000316097 ERC2-IT1O76042 136 aa11.25□□□□□ -0.61
SCAMP4-201ENST00000316097 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
SCAMP4-201ENST00000316097 PRYO14603 147 aa11.24□□□□□ -0.61
SCAMP4-201ENST00000316097 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
SCAMP4-201ENST00000316097 OCR1Q9BZK8 76 aa11.24□□□□□ -0.61
SCAMP4-201ENST00000316097 Q6ZRU5 148 aa11.23□□□□□ -0.61
SCAMP4-201ENST00000316097 A0A0U1RQV1 116 aa11.22□□□□□ -0.61
SCAMP4-201ENST00000316097 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
SCAMP4-201ENST00000316097 MEGF8Q7Z7M0 2845 aa11.22□□□□□ -0.61
SCAMP4-201ENST00000316097 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SCAMP4-201ENST00000316097 TENM2Q9NT68 2774 aa11.21□□□□□ -0.62
SCAMP4-201ENST00000316097 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
SCAMP4-201ENST00000316097 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
SCAMP4-201ENST00000316097 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
SCAMP4-201ENST00000316097 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCAMP4-201ENST00000316097 BRK1Q8WUW1 75 aa11.19□□□□□ -0.62
SCAMP4-201ENST00000316097 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
SCAMP4-201ENST00000316097 PRKDCP78527 4128 aaKnown RBP11.18□□□□□ -0.62
SCAMP4-201ENST00000316097 B9D2Q9BPU9 175 aa11.18□□□□□ -0.62
SCAMP4-201ENST00000316097 LINC01556Q5JQF7 62 aa11.16□□□□□ -0.62
SCAMP4-201ENST00000316097 IGKV2D-24A0A075B6R9 120 aa11.15□□□□□ -0.62
SCAMP4-201ENST00000316097 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
SCAMP4-201ENST00000316097 Q6ZRP5 223 aa11.15□□□□□ -0.62
SCAMP4-201ENST00000316097 C15orf56Q8N910 161 aa11.15□□□□□ -0.62
SCAMP4-201ENST00000316097 Q8N377 158 aa11.14□□□□□ -0.63
SCAMP4-201ENST00000316097 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
SCAMP4-201ENST00000316097 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
SCAMP4-201ENST00000316097 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
SCAMP4-201ENST00000316097 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
SCAMP4-201ENST00000316097 CASC10Q5T4H9 136 aa11.1□□□□□ -0.63
SCAMP4-201ENST00000316097 NKAPP1Q8N9T2 125 aa11.1□□□□□ -0.63
SCAMP4-201ENST00000316097 IGLV5-48A0A075B6I7 105 aa11.09□□□□□ -0.63
SCAMP4-201ENST00000316097 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
SCAMP4-201ENST00000316097 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
SCAMP4-201ENST00000316097 C7orf33Q8WU49 177 aa11.08□□□□□ -0.64
SCAMP4-201ENST00000316097 A0A1W2PNM2 257 aa11.07□□□□□ -0.64
SCAMP4-201ENST00000316097 SYCNQ0VAF6 134 aa11.05□□□□□ -0.64
SCAMP4-201ENST00000316097 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
SCAMP4-201ENST00000316097 DNAH1Q9P2D7 4330 aa11.04□□□□□ -0.64
SCAMP4-201ENST00000316097 APLNQ9ULZ1 77 aa11.04□□□□□ -0.64
SCAMP4-201ENST00000316097 KRTAP1-5Q9BYS1 174 aa11.04□□□□□ -0.64
SCAMP4-201ENST00000316097 C1orf137Q5JT78 98 aa11.03□□□□□ -0.64
SCAMP4-201ENST00000316097 DNAH10Q8IVF4 4471 aa11.03□□□□□ -0.64
SCAMP4-201ENST00000316097 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
SCAMP4-201ENST00000316097 LRCOL1A6NCL2 159 aa11.02□□□□□ -0.64
SCAMP4-201ENST00000316097 Q9BRP9 147 aa11.02□□□□□ -0.65
SCAMP4-201ENST00000316097 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 STARD9Q9P2P6 4700 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 Q6ZRX8 168 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 DHRS4-AS1Q9P1J3 65 aa11.01□□□□□ -0.65
SCAMP4-201ENST00000316097 LCE6AA0A183 80 aa11□□□□□ -0.65
SCAMP4-201ENST00000316097 Q8NBF4 154 aa11□□□□□ -0.65
SCAMP4-201ENST00000316097 C1orf195Q5TG92 126 aa10.99□□□□□ -0.65
SCAMP4-201ENST00000316097 A0A1B0GW54 56 aa10.99□□□□□ -0.65
SCAMP4-201ENST00000316097 DSCR10P59022 87 aa10.99□□□□□ -0.65
SCAMP4-201ENST00000316097 TNP2Q05952 138 aa10.99□□□□□ -0.65
SCAMP4-201ENST00000316097 K7EQZ3 153 aa10.98□□□□□ -0.65
SCAMP4-201ENST00000316097 ETDCA0A1B0GVM5 59 aa10.98□□□□□ -0.65
SCAMP4-201ENST00000316097 FBN3Q75N90 2809 aa10.98□□□□□ -0.65
SCAMP4-201ENST00000316097 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms