RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 VPREB1P12018 145 aa9.89□□□□□ -0.83
TFE3-201ENST00000315869 TGP01266 2768 aa9.89□□□□□ -0.83
TFE3-201ENST00000315869 NREPQ16612 68 aa9.89□□□□□ -0.83
TFE3-201ENST00000315869 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
TFE3-201ENST00000315869 ELOF1P60002 83 aaKnown RBP9.88□□□□□ -0.83
TFE3-201ENST00000315869 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
TFE3-201ENST00000315869 F8WEM9 126 aa9.87□□□□□ -0.83
TFE3-201ENST00000315869 TM2D3Q9BRN9 247 aa9.87□□□□□ -0.83
TFE3-201ENST00000315869 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
TFE3-201ENST00000315869 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
TFE3-201ENST00000315869 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
TFE3-201ENST00000315869 ESRGQ1W209 222 aa9.86□□□□□ -0.83
TFE3-201ENST00000315869 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
TFE3-201ENST00000315869 Q6ZRP5 223 aa9.85□□□□□ -0.83
TFE3-201ENST00000315869 H3BQ85 93 aa9.84□□□□□ -0.83
TFE3-201ENST00000315869 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
TFE3-201ENST00000315869 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
TFE3-201ENST00000315869 BPY2O14599 106 aa9.83□□□□□ -0.84
TFE3-201ENST00000315869 CXCL6P80162 114 aa9.83□□□□□ -0.84
TFE3-201ENST00000315869 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
TFE3-201ENST00000315869 H7BZZ5 65 aa9.82□□□□□ -0.84
TFE3-201ENST00000315869 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
TFE3-201ENST00000315869 CMYA5Q8N3K9 4069 aa9.8□□□□□ -0.84
TFE3-201ENST00000315869 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
TFE3-201ENST00000315869 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
TFE3-201ENST00000315869 C7orf33Q8WU49 177 aa9.78□□□□□ -0.84
TFE3-201ENST00000315869 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
TFE3-201ENST00000315869 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.84
TFE3-201ENST00000315869 MDFIQ99750 246 aa9.77□□□□□ -0.85
TFE3-201ENST00000315869 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
TFE3-201ENST00000315869 UBE2BP63146 152 aa9.76□□□□□ -0.85
TFE3-201ENST00000315869 FAM168BA1KXE4 195 aa9.76□□□□□ -0.85
TFE3-201ENST00000315869 WIPF1O43516 503 aa9.75□□□□□ -0.85
TFE3-201ENST00000315869 TMEM254Q8TBM7 123 aa9.75□□□□□ -0.85
TFE3-201ENST00000315869 SERP1Q9Y6X1 66 aa9.74□□□□□ -0.85
TFE3-201ENST00000315869 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
TFE3-201ENST00000315869 KLKP1Q107X0 134 aa9.73□□□□□ -0.85
TFE3-201ENST00000315869 KRTAP26-1Q6PEX3 210 aa9.73□□□□□ -0.85
TFE3-201ENST00000315869 ST20-AS1Q8NBB2 130 aa9.73□□□□□ -0.85
TFE3-201ENST00000315869 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
TFE3-201ENST00000315869 Q8N377 158 aa9.72□□□□□ -0.85
TFE3-201ENST00000315869 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
TFE3-201ENST00000315869 Q5XG85 94 aa9.72□□□□□ -0.85
TFE3-201ENST00000315869 BCE1O60756 84 aa9.71□□□□□ -0.86
TFE3-201ENST00000315869 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
TFE3-201ENST00000315869 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
TFE3-201ENST00000315869 K7EIL1 84 aa9.7□□□□□ -0.86
TFE3-201ENST00000315869 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
TFE3-201ENST00000315869 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
TFE3-201ENST00000315869 IGKV4-1P06312 121 aa9.69□□□□□ -0.86
TFE3-201ENST00000315869 MPLKIPQ8TAP9 179 aa9.69□□□□□ -0.86
TFE3-201ENST00000315869 IGKV2-24A0A0C4DH68 120 aa9.68□□□□□ -0.86
TFE3-201ENST00000315869 A0A0G2JQZ4 141 aa9.68□□□□□ -0.86
TFE3-201ENST00000315869 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
TFE3-201ENST00000315869 HIGD2AQ9BW72 106 aa9.68□□□□□ -0.86
TFE3-201ENST00000315869 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
TFE3-201ENST00000315869 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
TFE3-201ENST00000315869 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
TFE3-201ENST00000315869 H3BNG1 76 aa9.66□□□□□ -0.86
TFE3-201ENST00000315869 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
TFE3-201ENST00000315869 DEFB116Q30KQ4 102 aa9.66□□□□□ -0.86
TFE3-201ENST00000315869 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
TFE3-201ENST00000315869 NDUFC1O43677 76 aa9.65□□□□□ -0.86
TFE3-201ENST00000315869 Q6ZRX8 168 aa9.65□□□□□ -0.86
TFE3-201ENST00000315869 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
TFE3-201ENST00000315869 PRYO14603 147 aa9.64□□□□□ -0.87
TFE3-201ENST00000315869 ERC2-IT1O76042 136 aa9.64□□□□□ -0.87
TFE3-201ENST00000315869 Q9BRP9 147 aa9.63□□□□□ -0.87
TFE3-201ENST00000315869 A0A1W2PNM2 257 aa9.63□□□□□ -0.87
TFE3-201ENST00000315869 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
TFE3-201ENST00000315869 PRR4Q16378 134 aa9.62□□□□□ -0.87
TFE3-201ENST00000315869 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
TFE3-201ENST00000315869 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
TFE3-201ENST00000315869 LYSTQ99698 3801 aa9.6□□□□□ -0.87
TFE3-201ENST00000315869 BRK1Q8WUW1 75 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 PRLHP81277 87 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 PSCAO43653 123 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
TFE3-201ENST00000315869 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
TFE3-201ENST00000315869 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
TFE3-201ENST00000315869 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
TFE3-201ENST00000315869 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
TFE3-201ENST00000315869 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
TFE3-201ENST00000315869 Q8NBF4 154 aa9.58□□□□□ -0.88
TFE3-201ENST00000315869 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
TFE3-201ENST00000315869 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
TFE3-201ENST00000315869 A0A096LNI7 61 aa9.57□□□□□ -0.88
TFE3-201ENST00000315869 K7EQZ3 153 aa9.56□□□□□ -0.88
TFE3-201ENST00000315869 DNAH3Q8TD57 4116 aa9.55□□□□□ -0.88
TFE3-201ENST00000315869 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
TFE3-201ENST00000315869 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
TFE3-201ENST00000315869 F8WDY8 70 aa9.54□□□□□ -0.88
TFE3-201ENST00000315869 ATP5EP56381 51 aaPredicted RBP9.54□□□□□ -0.88
TFE3-201ENST00000315869 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
TFE3-201ENST00000315869 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
TFE3-201ENST00000315869 A0A087WSZ3 146 aa9.53□□□□□ -0.88
TFE3-201ENST00000315869 DNHD1Q96M86 4753 aa9.51□□□□□ -0.89
TFE3-201ENST00000315869 KRTAP7-1Q8IUC3 87 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms