RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 FAT2Q9NYQ8 4349 aa10.42□□□□□ -0.74
TUBB3-201ENST00000315491 TLX1NBP0CAT3 122 aa10.42□□□□□ -0.74
TUBB3-201ENST00000315491 TMEM258P61165 79 aa10.42□□□□□ -0.74
TUBB3-201ENST00000315491 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
TUBB3-201ENST00000315491 RPL18AQ02543 176 aaKnown RBP10.41□□□□□ -0.74
TUBB3-201ENST00000315491 Q6JHZ5 121 aa10.4□□□□□ -0.74
TUBB3-201ENST00000315491 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
TUBB3-201ENST00000315491 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.75
TUBB3-201ENST00000315491 Q6ZRP5 223 aa10.39□□□□□ -0.75
TUBB3-201ENST00000315491 DNAH11Q96DT5 4516 aa10.39□□□□□ -0.75
TUBB3-201ENST00000315491 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
TUBB3-201ENST00000315491 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
TUBB3-201ENST00000315491 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
TUBB3-201ENST00000315491 KRTAP10-2P60368 255 aa10.37□□□□□ -0.75
TUBB3-201ENST00000315491 PKIGQ9Y2B9 76 aa10.37□□□□□ -0.75
TUBB3-201ENST00000315491 hADV29S1A0JD25 119 aa10.37□□□□□ -0.75
TUBB3-201ENST00000315491 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
TUBB3-201ENST00000315491 FAM218AQ96MZ4 157 aa10.36□□□□□ -0.75
TUBB3-201ENST00000315491 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
TUBB3-201ENST00000315491 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
TUBB3-201ENST00000315491 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
TUBB3-201ENST00000315491 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
TUBB3-201ENST00000315491 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
TUBB3-201ENST00000315491 RYR3Q15413 4870 aa10.33□□□□□ -0.76
TUBB3-201ENST00000315491 A0A096LNI7 61 aa10.33□□□□□ -0.76
TUBB3-201ENST00000315491 C9orf129Q5T035 196 aaKnown RBP10.33□□□□□ -0.76
TUBB3-201ENST00000315491 DNAL4O96015 105 aa10.32□□□□□ -0.76
TUBB3-201ENST00000315491 HECTD4Q9Y4D8 3996 aa10.32□□□□□ -0.76
TUBB3-201ENST00000315491 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
TUBB3-201ENST00000315491 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
TUBB3-201ENST00000315491 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
TUBB3-201ENST00000315491 PKD1P98161 4303 aa10.29□□□□□ -0.76
TUBB3-201ENST00000315491 H0YGX0 51 aa10.29□□□□□ -0.76
TUBB3-201ENST00000315491 CHTF8P0CG12 524 aa10.29□□□□□ -0.76
TUBB3-201ENST00000315491 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
TUBB3-201ENST00000315491 NDUFC2O95298 119 aa10.28□□□□□ -0.76
TUBB3-201ENST00000315491 Q8NDZ9 215 aa10.28□□□□□ -0.76
TUBB3-201ENST00000315491 LINC00474Q9P2X8 69 aa10.28□□□□□ -0.76
TUBB3-201ENST00000315491 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 FAM168BA1KXE4 195 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 PANO1I0J062 215 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 VPREB1P12018 145 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 LINC00846Q9NV44 126 aa10.26□□□□□ -0.77
TUBB3-201ENST00000315491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
TUBB3-201ENST00000315491 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
TUBB3-201ENST00000315491 OXTP01178 125 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
TUBB3-201ENST00000315491 S100A7L2Q5SY68 101 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 ATP5EP2Q5VTU8 51 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
TUBB3-201ENST00000315491 A0A087WYN8 130 aa10.23□□□□□ -0.77
TUBB3-201ENST00000315491 A0A1W2PNN7 141 aa10.23□□□□□ -0.77
TUBB3-201ENST00000315491 NCR3O14931 201 aa10.23□□□□□ -0.77
TUBB3-201ENST00000315491 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
TUBB3-201ENST00000315491 LINC00337Q8N6G1 96 aa10.23□□□□□ -0.77
TUBB3-201ENST00000315491 DNAH8Q96JB1 4490 aa10.22□□□□□ -0.77
TUBB3-201ENST00000315491 IGLV5-37A0A075B6J1 123 aa10.22□□□□□ -0.77
TUBB3-201ENST00000315491 Q5XG85 94 aa10.22□□□□□ -0.77
TUBB3-201ENST00000315491 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
TUBB3-201ENST00000315491 NKAPP1Q8N9T2 125 aa10.21□□□□□ -0.77
TUBB3-201ENST00000315491 DSCR8Q96T75 97 aa10.21□□□□□ -0.78
TUBB3-201ENST00000315491 CCKP06307 115 aa10.2□□□□□ -0.78
TUBB3-201ENST00000315491 A0A087WVE0 104 aa10.19□□□□□ -0.78
TUBB3-201ENST00000315491 M0R378 163 aa10.19□□□□□ -0.78
TUBB3-201ENST00000315491 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
TUBB3-201ENST00000315491 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
TUBB3-201ENST00000315491 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
TUBB3-201ENST00000315491 BCE1O60756 84 aa10.18□□□□□ -0.78
TUBB3-201ENST00000315491 Q6ZSA8 131 aa10.18□□□□□ -0.78
TUBB3-201ENST00000315491 C7orf33Q8WU49 177 aa10.17□□□□□ -0.78
TUBB3-201ENST00000315491 EPM2AB3EWF7 344 aa10.16□□□□□ -0.78
TUBB3-201ENST00000315491 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
TUBB3-201ENST00000315491 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
TUBB3-201ENST00000315491 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
TUBB3-201ENST00000315491 ORMDL1Q9P0S3 153 aa10.16□□□□□ -0.78
TUBB3-201ENST00000315491 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
TUBB3-201ENST00000315491 JMJD7-PLA2G4BH0Y9G9 81 aa10.15□□□□□ -0.78
TUBB3-201ENST00000315491 GHRHP01286 108 aa10.15□□□□□ -0.78
TUBB3-201ENST00000315491 LRP1BQ9NZR2 4599 aa10.15□□□□□ -0.79
TUBB3-201ENST00000315491 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
TUBB3-201ENST00000315491 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
TUBB3-201ENST00000315491 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
TUBB3-201ENST00000315491 CIRBP-AS1Q8TBR5 109 aa10.12□□□□□ -0.79
TUBB3-201ENST00000315491 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 FAM236DA0A1B0GTK5 79 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 RPL37AP8A6NKH3 93 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 FAM236CP0DP71 79 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
TUBB3-201ENST00000315491 UBE2BP63146 152 aa10.09□□□□□ -0.79
TUBB3-201ENST00000315491 TRAV23DV6A0A075B6W5 121 aa10.09□□□□□ -0.79
TUBB3-201ENST00000315491 HAMPP81172 84 aa10.09□□□□□ -0.79
TUBB3-201ENST00000315491 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
TUBB3-201ENST00000315491 KCNQ1DNQ9H478 68 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms