RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
RNF4-201ENST00000314289 PRKDCP78527 4128 aaKnown RBP8.15□□□□□ -1.1
RNF4-201ENST00000314289 DNAH1Q9P2D7 4330 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 M0R2N4 97 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 HAMPP81172 84 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 IGLV6-57P01721 117 aa8.14□□□□□ -1.11
RNF4-201ENST00000314289 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
RNF4-201ENST00000314289 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
RNF4-201ENST00000314289 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
RNF4-201ENST00000314289 VPREB1P12018 145 aa8.12□□□□□ -1.11
RNF4-201ENST00000314289 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
RNF4-201ENST00000314289 Q6ZQT0 140 aa8.11□□□□□ -1.11
RNF4-201ENST00000314289 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
RNF4-201ENST00000314289 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
RNF4-201ENST00000314289 SERTAD4-AS1Q5TG53 156 aa8.1□□□□□ -1.11
RNF4-201ENST00000314289 UBE2DNLQ8IWF7 75 aa8.1□□□□□ -1.11
RNF4-201ENST00000314289 Q5XG85 94 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 Q6ZQY7 126 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
RNF4-201ENST00000314289 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 LINC01547P58512 204 aaPredicted RBP8.09□□□□□ -1.11
RNF4-201ENST00000314289 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
RNF4-201ENST00000314289 Q6ZVQ6 151 aa8.08□□□□□ -1.12
RNF4-201ENST00000314289 DIRC1Q969H9 104 aa8.08□□□□□ -1.12
RNF4-201ENST00000314289 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
RNF4-201ENST00000314289 B9D2Q9BPU9 175 aa8.07□□□□□ -1.12
RNF4-201ENST00000314289 TGP01266 2768 aa8.06□□□□□ -1.12
RNF4-201ENST00000314289 M0R378 163 aa8.06□□□□□ -1.12
RNF4-201ENST00000314289 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
RNF4-201ENST00000314289 RMI2Q96E14 147 aa8.05□□□□□ -1.12
RNF4-201ENST00000314289 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
RNF4-201ENST00000314289 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.05□□□□□ -1.12
RNF4-201ENST00000314289 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
RNF4-201ENST00000314289 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
RNF4-201ENST00000314289 LOC110117498A0A087WWA1 95 aa8.04□□□□□ -1.12
RNF4-201ENST00000314289 H7BZZ5 65 aa8.04□□□□□ -1.12
RNF4-201ENST00000314289 PSCAO43653 123 aa8.04□□□□□ -1.12
RNF4-201ENST00000314289 COX7BP24311 80 aa8.04□□□□□ -1.12
RNF4-201ENST00000314289 C7orf33Q8WU49 177 aa8.04□□□□□ -1.12
RNF4-201ENST00000314289 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
RNF4-201ENST00000314289 F8WEM9 126 aa8.01□□□□□ -1.13
RNF4-201ENST00000314289 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
RNF4-201ENST00000314289 ELOF1P60002 83 aaKnown RBP8.01□□□□□ -1.13
RNF4-201ENST00000314289 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
RNF4-201ENST00000314289 DEFB105AQ8NG35 78 aa7.99□□□□□ -1.13
RNF4-201ENST00000314289 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
RNF4-201ENST00000314289 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
RNF4-201ENST00000314289 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
RNF4-201ENST00000314289 Q8N9L7 120 aa7.98□□□□□ -1.13
RNF4-201ENST00000314289 CXCL6P80162 114 aa7.97□□□□□ -1.13
RNF4-201ENST00000314289 F8WDY8 70 aa7.97□□□□□ -1.13
RNF4-201ENST00000314289 DYNC2H1Q8NCM8 4307 aaKnown RBP7.97□□□□□ -1.13
RNF4-201ENST00000314289 KMT2AQ03164 3969 aa7.97□□□□□ -1.13
RNF4-201ENST00000314289 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
RNF4-201ENST00000314289 PDE6GP18545 87 aa7.97□□□□□ -1.13
RNF4-201ENST00000314289 A0A096LNI7 61 aa7.96□□□□□ -1.14
RNF4-201ENST00000314289 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.143e-6■□□□□ 10.6
RNF4-201ENST00000314289 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
RNF4-201ENST00000314289 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
RNF4-201ENST00000314289 BCE1O60756 84 aa7.95□□□□□ -1.14
RNF4-201ENST00000314289 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
RNF4-201ENST00000314289 TRBV7-4A0A0J9YYF1 115 aa7.94□□□□□ -1.14
RNF4-201ENST00000314289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.94□□□□□ -1.14
RNF4-201ENST00000314289 NREPQ16612 68 aa7.94□□□□□ -1.14
RNF4-201ENST00000314289 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
RNF4-201ENST00000314289 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
RNF4-201ENST00000314289 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
RNF4-201ENST00000314289 NBDYA0A0U1RRE5 68 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 BPY2O14599 106 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 Q9BRP9 147 aa7.92□□□□□ -1.14
RNF4-201ENST00000314289 EPM2AB3EWF7 344 aa7.91□□□□□ -1.14
RNF4-201ENST00000314289 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
RNF4-201ENST00000314289 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
RNF4-201ENST00000314289 C3orf84H3BNL1 204 aa7.91□□□□□ -1.14
RNF4-201ENST00000314289 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
RNF4-201ENST00000314289 H3BQ85 93 aa7.9□□□□□ -1.14
RNF4-201ENST00000314289 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
RNF4-201ENST00000314289 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
RNF4-201ENST00000314289 Q6ZRX8 168 aa7.89□□□□□ -1.15
RNF4-201ENST00000314289 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
RNF4-201ENST00000314289 SMIM26A0A096LP01 95 aa7.89□□□□□ -1.15
RNF4-201ENST00000314289 UBE2BP63146 152 aa7.88□□□□□ -1.15
RNF4-201ENST00000314289 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
RNF4-201ENST00000314289 LRCOL1A6NCL2 159 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 C16orf90A8MZG2 172 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
RNF4-201ENST00000314289 PRLHP81277 87 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 Q8N377 158 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 NDUFC1O43677 76 aa7.87□□□□□ -1.15
RNF4-201ENST00000314289 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms