RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TMEM254Q8TBM7 123 aa9.1□□□□□ -0.95
MKS1-201ENST00000313863 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
MKS1-201ENST00000313863 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
MKS1-201ENST00000313863 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
MKS1-201ENST00000313863 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
MKS1-201ENST00000313863 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
MKS1-201ENST00000313863 INAFM1C9JVW0 142 aa9.07□□□□□ -0.96
MKS1-201ENST00000313863 ESRGQ1W209 222 aa9.07□□□□□ -0.96
MKS1-201ENST00000313863 FP248Q71RG6 208 aaPredicted RBP9.07□□□□□ -0.96
MKS1-201ENST00000313863 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
MKS1-201ENST00000313863 FASNP49327 2511 aaKnown RBP9.06□□□□□ -0.96
MKS1-201ENST00000313863 TLX1NBP0CAT3 122 aa9.06□□□□□ -0.96
MKS1-201ENST00000313863 Q6ZTC4 211 aa9.06□□□□□ -0.96
MKS1-201ENST00000313863 LINC00336Q6ZUF6 198 aa9.06□□□□□ -0.96
MKS1-201ENST00000313863 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
MKS1-201ENST00000313863 PRYO14603 147 aa9.05□□□□□ -0.96
MKS1-201ENST00000313863 Q8N377 158 aa9.05□□□□□ -0.96
MKS1-201ENST00000313863 HIVEP1P15822 2718 aa9.05□□□□□ -0.96
MKS1-201ENST00000313863 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
MKS1-201ENST00000313863 DEFB105AQ8NG35 78 aa9.04□□□□□ -0.96
MKS1-201ENST00000313863 C3orf84H3BNL1 204 aa9.03□□□□□ -0.96
MKS1-201ENST00000313863 Q6ZRX8 168 aa9.03□□□□□ -0.96
MKS1-201ENST00000313863 Q8N9L7 120 aa9.03□□□□□ -0.96
MKS1-201ENST00000313863 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
MKS1-201ENST00000313863 A0A0U1RQV1 116 aa9.03□□□□□ -0.96
MKS1-201ENST00000313863 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
MKS1-201ENST00000313863 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
MKS1-201ENST00000313863 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
MKS1-201ENST00000313863 RETNQ9HD89 108 aa9.01□□□□□ -0.97
MKS1-201ENST00000313863 TEP1Q99973 2627 aaKnown RBP9.01□□□□□ -0.97
MKS1-201ENST00000313863 TENM1Q9UKZ4 2725 aa9.01□□□□□ -0.97
MKS1-201ENST00000313863 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
MKS1-201ENST00000313863 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
MKS1-201ENST00000313863 IGLV1-50A0A075B6I6 118 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 SPRR1AP35321 89 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 ATRQ13535 2644 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 C1orf137Q5JT78 98 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 Q8NBF4 154 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 C11orf45Q8TAV5 145 aa8.98□□□□□ -0.97
MKS1-201ENST00000313863 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
MKS1-201ENST00000313863 TNP2Q05952 138 aa8.97□□□□□ -0.97
MKS1-201ENST00000313863 A0A1W2PNM2 257 aa8.96□□□□□ -0.98
MKS1-201ENST00000313863 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
MKS1-201ENST00000313863 Q9BRP9 147 aa8.96□□□□□ -0.98
MKS1-201ENST00000313863 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
MKS1-201ENST00000313863 RPL37AP8A6NKH3 93 aa8.95□□□□□ -0.98
MKS1-201ENST00000313863 KRTAP10-11P60412 298 aa8.93□□□□□ -0.98
MKS1-201ENST00000313863 OXLD1Q5BKU9 147 aa8.93□□□□□ -0.98
MKS1-201ENST00000313863 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
MKS1-201ENST00000313863 LCE6AA0A183 80 aa8.93□□□□□ -0.98
MKS1-201ENST00000313863 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
MKS1-201ENST00000313863 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
MKS1-201ENST00000313863 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
MKS1-201ENST00000313863 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
MKS1-201ENST00000313863 UBE2BP63146 152 aa8.9□□□□□ -0.98
MKS1-201ENST00000313863 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.98
MKS1-201ENST00000313863 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.99
MKS1-201ENST00000313863 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
MKS1-201ENST00000313863 TRRAPQ9Y4A5 3859 aa8.89□□□□□ -0.99
MKS1-201ENST00000313863 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
MKS1-201ENST00000313863 DSCR10P59022 87 aa8.87□□□□□ -0.99
MKS1-201ENST00000313863 HECTD1Q9ULT8 2610 aa8.86□□□□□ -0.99
MKS1-201ENST00000313863 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
MKS1-201ENST00000313863 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
MKS1-201ENST00000313863 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
MKS1-201ENST00000313863 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
MKS1-201ENST00000313863 PKD1L1Q8TDX9 2849 aa8.84□□□□□ -0.99
MKS1-201ENST00000313863 K7EQZ3 153 aa8.84□□□□□ -0.99
MKS1-201ENST00000313863 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
MKS1-201ENST00000313863 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
MKS1-201ENST00000313863 CASC10Q5T4H9 136 aa8.82□□□□□ -1
MKS1-201ENST00000313863 NDUFB1O75438 58 aa8.81□□□□□ -1
MKS1-201ENST00000313863 MPLKIPQ8TAP9 179 aa8.81□□□□□ -1
MKS1-201ENST00000313863 BRK1Q8WUW1 75 aa8.81□□□□□ -1
MKS1-201ENST00000313863 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
MKS1-201ENST00000313863 hDV103S1A0JD37 113 aa8.81□□□□□ -1
MKS1-201ENST00000313863 PSCAO43653 123 aa8.81□□□□□ -1
MKS1-201ENST00000313863 TENM3Q9P273 2699 aa8.8□□□□□ -1
MKS1-201ENST00000313863 PKIGQ9Y2B9 76 aa8.79□□□□□ -1
MKS1-201ENST00000313863 IGFL1Q6UW32 110 aa8.79□□□□□ -1
MKS1-201ENST00000313863 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
MKS1-201ENST00000313863 C1orf195Q5TG92 126 aa8.78□□□□□ -1
MKS1-201ENST00000313863 MP68P56378 58 aa8.77□□□□□ -1.01
MKS1-201ENST00000313863 CYP4F30PQ9H0H9 118 aa8.77□□□□□ -1.01
MKS1-201ENST00000313863 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
MKS1-201ENST00000313863 Q1T7F1 81 aa8.75□□□□□ -1.01
MKS1-201ENST00000313863 C1orf64Q8NEQ6 169 aa8.74□□□□□ -1.01
MKS1-201ENST00000313863 UBE2AP49459 152 aa8.73□□□□□ -1.01
MKS1-201ENST00000313863 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
MKS1-201ENST00000313863 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
MKS1-201ENST00000313863 H3BPC8 53 aa8.73□□□□□ -1.01
MKS1-201ENST00000313863 V9GYY9 64 aa8.73□□□□□ -1.01
MKS1-201ENST00000313863 A0A087WSZ3 146 aa8.72□□□□□ -1.01
MKS1-201ENST00000313863 DNAH3Q8TD57 4116 aa8.72□□□□□ -1.01
MKS1-201ENST00000313863 ANK2Q01484 3957 aa8.71□□□□□ -1.01
MKS1-201ENST00000313863 A0A096LNI7 61 aa8.71□□□□□ -1.01
MKS1-201ENST00000313863 PRLHP81277 87 aa8.71□□□□□ -1.01
MKS1-201ENST00000313863 DNAH1Q9P2D7 4330 aa8.71□□□□□ -1.02
MKS1-201ENST00000313863 H0Y9J4 135 aa8.7□□□□□ -1.02
MKS1-201ENST00000313863 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms