RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 BAHCC1Q9P281 2608 aa9.15□□□□□ -0.94
TRIM56-201ENST00000306085 PRO3102Q9H379 93 aa9.15□□□□□ -0.94
TRIM56-201ENST00000306085 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
TRIM56-201ENST00000306085 FAM168BA1KXE4 195 aa9.13□□□□□ -0.95
TRIM56-201ENST00000306085 IGLV5-48A0A075B6I7 105 aa9.13□□□□□ -0.95
TRIM56-201ENST00000306085 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
TRIM56-201ENST00000306085 WIPF1O43516 503 aa9.12□□□□□ -0.95
TRIM56-201ENST00000306085 LINC00315P59091 139 aa9.11□□□□□ -0.95
TRIM56-201ENST00000306085 CDSNQ15517 529 aa9.11□□□□□ -0.95
TRIM56-201ENST00000306085 COX8CQ7Z4L0 72 aa9.1□□□□□ -0.95
TRIM56-201ENST00000306085 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
TRIM56-201ENST00000306085 C16orf95Q9H693 158 aa9.1□□□□□ -0.95
TRIM56-201ENST00000306085 C8orf17Q9NRJ1 99 aa9.1□□□□□ -0.95
TRIM56-201ENST00000306085 LINC01546A6NGU7 62 aa9.09□□□□□ -0.95
TRIM56-201ENST00000306085 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
TRIM56-201ENST00000306085 KRTAP10-9P60411 292 aa9.07□□□□□ -0.96
TRIM56-201ENST00000306085 Q1T7F1 81 aa9.07□□□□□ -0.96
TRIM56-201ENST00000306085 IGLV5-45A0A087WSX0 123 aa9.06□□□□□ -0.96
TRIM56-201ENST00000306085 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
TRIM56-201ENST00000306085 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
TRIM56-201ENST00000306085 Q8N1X5 172 aa9.04□□□□□ -0.96
TRIM56-201ENST00000306085 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
TRIM56-201ENST00000306085 ITPR3Q14573 2671 aa9.03□□□□□ -0.96
TRIM56-201ENST00000306085 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
TRIM56-201ENST00000306085 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.97
TRIM56-201ENST00000306085 A0A1B0GVX0 72 aa9.02□□□□□ -0.97
TRIM56-201ENST00000306085 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
TRIM56-201ENST00000306085 A0A0A0MQY5 61 aa9.02□□□□□ -0.97
TRIM56-201ENST00000306085 UNC79Q9P2D8 2635 aa9.01□□□□□ -0.97
TRIM56-201ENST00000306085 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
TRIM56-201ENST00000306085 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
TRIM56-201ENST00000306085 IGFL1Q6UW32 110 aa8.99□□□□□ -0.97
TRIM56-201ENST00000306085 H7BZZ5 65 aa8.98□□□□□ -0.97
TRIM56-201ENST00000306085 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
TRIM56-201ENST00000306085 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.98
TRIM56-201ENST00000306085 COL6A5A8TX70 2615 aa8.96□□□□□ -0.98
TRIM56-201ENST00000306085 CHD6Q8TD26 2715 aa8.95□□□□□ -0.98
TRIM56-201ENST00000306085 HELZ2Q9BYK8 2649 aaKnown RBP8.95□□□□□ -0.98
TRIM56-201ENST00000306085 CENPFP49454 3210 aa8.94□□□□□ -0.98
TRIM56-201ENST00000306085 FLNBO75369 2602 aaKnown RBP8.94□□□□□ -0.98
TRIM56-201ENST00000306085 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
TRIM56-201ENST00000306085 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
TRIM56-201ENST00000306085 H3BNG1 76 aa8.92□□□□□ -0.98
TRIM56-201ENST00000306085 NSD1Q96L73 2696 aaPredicted RBP8.92□□□□□ -0.98
TRIM56-201ENST00000306085 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
TRIM56-201ENST00000306085 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
TRIM56-201ENST00000306085 IGLV1-50A0A075B6I6 118 aa8.87□□□□□ -0.99
TRIM56-201ENST00000306085 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
TRIM56-201ENST00000306085 DNAH10OSP0CZ25 163 aa8.85□□□□□ -0.99
TRIM56-201ENST00000306085 SPANXA2-OT1Q8N9U9 137 aa8.85□□□□□ -0.99
TRIM56-201ENST00000306085 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
TRIM56-201ENST00000306085 ZNF861PO60384 105 aa8.83□□□□□ -1
TRIM56-201ENST00000306085 M0R2T5 61 aa8.83□□□□□ -1
TRIM56-201ENST00000306085 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
TRIM56-201ENST00000306085 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
TRIM56-201ENST00000306085 LITAFQ99732 161 aa8.83□□□□□ -1
TRIM56-201ENST00000306085 A0A1B0GU33 70 aa8.83□□□□□ -1
TRIM56-201ENST00000306085 A0A1W2PPR1 153 aa8.82□□□□□ -1
TRIM56-201ENST00000306085 Q8NAQ8 132 aa8.82□□□□□ -1
TRIM56-201ENST00000306085 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
TRIM56-201ENST00000306085 Q8N377 158 aa8.81□□□□□ -1
TRIM56-201ENST00000306085 C15orf56Q8N910 161 aa8.79□□□□□ -1
TRIM56-201ENST00000306085 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
TRIM56-201ENST00000306085 SPINK7P58062 85 aa8.78□□□□□ -1
TRIM56-201ENST00000306085 PRAC1Q96KF2 57 aa8.77□□□□□ -1.01
TRIM56-201ENST00000306085 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
TRIM56-201ENST00000306085 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
TRIM56-201ENST00000306085 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
TRIM56-201ENST00000306085 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
TRIM56-201ENST00000306085 Q6ZSA8 131 aa8.73□□□□□ -1.01
TRIM56-201ENST00000306085 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
TRIM56-201ENST00000306085 Q75L30 129 aa8.72□□□□□ -1.01
TRIM56-201ENST00000306085 COL4A2P08572 1712 aa8.72□□□□□ -1.01
TRIM56-201ENST00000306085 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
TRIM56-201ENST00000306085 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
TRIM56-201ENST00000306085 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
TRIM56-201ENST00000306085 Q5XG85 94 aa8.66□□□□□ -1.02
TRIM56-201ENST00000306085 HRES1P13985 223 aa8.66□□□□□ -1.02
TRIM56-201ENST00000306085 SPRR4Q96PI1 79 aa8.65□□□□□ -1.02
TRIM56-201ENST00000306085 S4R3F8 94 aa8.65□□□□□ -1.02
TRIM56-201ENST00000306085 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.03
TRIM56-201ENST00000306085 KRTAP24-1Q3LI83 254 aa8.64□□□□□ -1.03
TRIM56-201ENST00000306085 TEX15Q9BXT5 2789 aa8.63□□□□□ -1.03
TRIM56-201ENST00000306085 A0A087WTM6 91 aa8.62□□□□□ -1.03
TRIM56-201ENST00000306085 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
TRIM56-201ENST00000306085 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
TRIM56-201ENST00000306085 FAM229BQ4G0N7 80 aa8.6□□□□□ -1.03
TRIM56-201ENST00000306085 A0A1W2PNM2 257 aa8.58□□□□□ -1.04
TRIM56-201ENST00000306085 OCR1Q9BZK8 76 aa8.58□□□□□ -1.04
TRIM56-201ENST00000306085 IGLV7-46A0A075B6I9 117 aa8.56□□□□□ -1.04
TRIM56-201ENST00000306085 UTP20O75691 2785 aaKnown RBP8.55□□□□□ -1.04
TRIM56-201ENST00000306085 R4GN34 69 aa8.55□□□□□ -1.04
TRIM56-201ENST00000306085 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
TRIM56-201ENST00000306085 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
TRIM56-201ENST00000306085 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
TRIM56-201ENST00000306085 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
TRIM56-201ENST00000306085 ITPR2Q14571 2701 aa8.52□□□□□ -1.04
TRIM56-201ENST00000306085 Q8N9P0 234 aaPredicted RBP8.52□□□□□ -1.05
TRIM56-201ENST00000306085 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.05
TRIM56-201ENST00000306085 K7EIL1 84 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms