RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 USP9YO00507 2555 aaPredicted RBP4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 TLX1NBP0CAT3 122 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 CENPFP49454 3210 aa4.53□□□□□ -1.68
GAPVD1-202ENST00000297933 GOLGB1Q14789 3259 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-202ENST00000297933 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
GAPVD1-202ENST00000297933 PKD1L2Q7Z442 2459 aa4.52□□□□□ -1.69
GAPVD1-202ENST00000297933 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
GAPVD1-202ENST00000297933 TNP2Q05952 138 aa4.51□□□□□ -1.69
GAPVD1-202ENST00000297933 CNBPP62633 177 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-202ENST00000297933 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
GAPVD1-202ENST00000297933 K7EQZ3 153 aa4.51□□□□□ -1.69
GAPVD1-202ENST00000297933 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
GAPVD1-202ENST00000297933 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-202ENST00000297933 F8P00451 2351 aa4.49□□□□□ -1.69
GAPVD1-202ENST00000297933 LITAFQ99732 161 aa4.49□□□□□ -1.69
GAPVD1-202ENST00000297933 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
GAPVD1-202ENST00000297933 POLQO75417 2590 aa4.48□□□□□ -1.69
GAPVD1-202ENST00000297933 Q6ZSA8 131 aa4.47□□□□□ -1.69
GAPVD1-202ENST00000297933 MTORP42345 2549 aa4.47□□□□□ -1.69
GAPVD1-202ENST00000297933 PRR15Q8IV56 129 aa4.47□□□□□ -1.69
GAPVD1-202ENST00000297933 M0R2T5 61 aa4.47□□□□□ -1.69
GAPVD1-202ENST00000297933 SMCPP49901 116 aaPredicted RBP4.46□□□□□ -1.69
GAPVD1-202ENST00000297933 Q8N377 158 aa4.46□□□□□ -1.69
GAPVD1-202ENST00000297933 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.7
GAPVD1-202ENST00000297933 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
GAPVD1-202ENST00000297933 FLNBO75369 2602 aaKnown RBP4.45□□□□□ -1.7
GAPVD1-202ENST00000297933 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
GAPVD1-202ENST00000297933 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
GAPVD1-202ENST00000297933 ACANP16112 2415 aa4.43□□□□□ -1.7
GAPVD1-202ENST00000297933 COA5Q86WW8 74 aa4.43□□□□□ -1.7
GAPVD1-202ENST00000297933 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
GAPVD1-202ENST00000297933 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
GAPVD1-202ENST00000297933 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
GAPVD1-202ENST00000297933 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
GAPVD1-202ENST00000297933 HECTD1Q9ULT8 2610 aa4.4□□□□□ -1.7
GAPVD1-202ENST00000297933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-202ENST00000297933 UQCR11O14957 56 aa4.4□□□□□ -1.71
GAPVD1-202ENST00000297933 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
GAPVD1-202ENST00000297933 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
GAPVD1-202ENST00000297933 CD164Q04900 197 aa4.39□□□□□ -1.71
GAPVD1-202ENST00000297933 Q8N1X5 172 aa4.38□□□□□ -1.71
GAPVD1-202ENST00000297933 EIF4EBP3O60516 100 aaPredicted RBP4.38□□□□□ -1.71
GAPVD1-202ENST00000297933 WIPF1O43516 503 aa4.38□□□□□ -1.71
GAPVD1-202ENST00000297933 LCE6AA0A183 80 aa4.37□□□□□ -1.71
GAPVD1-202ENST00000297933 Q5VSD8 79 aa4.36□□□□□ -1.71
GAPVD1-202ENST00000297933 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
GAPVD1-202ENST00000297933 A0A0D9SG42 100 aa4.36□□□□□ -1.71
GAPVD1-202ENST00000297933 MIR22HGQ0VDD5 57 aa4.36□□□□□ -1.71
GAPVD1-202ENST00000297933 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
GAPVD1-202ENST00000297933 A0A1W2PNM2 257 aa4.34□□□□□ -1.71
GAPVD1-202ENST00000297933 FAM104AQ969W3 186 aa4.34□□□□□ -1.71
GAPVD1-202ENST00000297933 UTRNP46939 3433 aa4.34□□□□□ -1.72
GAPVD1-202ENST00000297933 CYP4F30PQ9H0H9 118 aa4.32□□□□□ -1.72
GAPVD1-202ENST00000297933 C4orf26Q17RF5 130 aa4.32□□□□□ -1.72
GAPVD1-202ENST00000297933 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
GAPVD1-202ENST00000297933 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
GAPVD1-202ENST00000297933 A8MUN3 132 aa4.31□□□□□ -1.72
GAPVD1-202ENST00000297933 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
GAPVD1-202ENST00000297933 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
GAPVD1-202ENST00000297933 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
GAPVD1-202ENST00000297933 CR1P17927 2039 aa4.28□□□□□ -1.72
GAPVD1-202ENST00000297933 DNAH12Q6ZR08 3092 aa4.28□□□□□ -1.72
GAPVD1-202ENST00000297933 S4R3F8 94 aa4.27□□□□□ -1.73
GAPVD1-202ENST00000297933 HRES1P13985 223 aa4.27□□□□□ -1.73
GAPVD1-202ENST00000297933 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
GAPVD1-202ENST00000297933 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-202ENST00000297933 HELZ2Q9BYK8 2649 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-202ENST00000297933 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
GAPVD1-202ENST00000297933 CEP350Q5VT06 3117 aa4.26□□□□□ -1.73
GAPVD1-202ENST00000297933 MGAM2Q2M2H8 2515 aa4.25□□□□□ -1.73
GAPVD1-202ENST00000297933 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
GAPVD1-202ENST00000297933 OXTP01178 125 aa4.25□□□□□ -1.73
GAPVD1-202ENST00000297933 SPANXA2-OT1Q8N9U9 137 aa4.25□□□□□ -1.73
GAPVD1-202ENST00000297933 KRTAP10-2P60368 255 aa4.25□□□□□ -1.73
GAPVD1-202ENST00000297933 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
GAPVD1-202ENST00000297933 PRRC2CQ9Y520 2896 aaKnown RBP4.22□□□□□ -1.73
GAPVD1-202ENST00000297933 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
GAPVD1-202ENST00000297933 A0A1B0GU33 70 aa4.2□□□□□ -1.74
GAPVD1-202ENST00000297933 USP24Q9UPU5 2620 aa4.19□□□□□ -1.74
GAPVD1-202ENST00000297933 FLNAP21333 2647 aaKnown RBP4.19□□□□□ -1.74
GAPVD1-202ENST00000297933 H7BZZ5 65 aa4.19□□□□□ -1.74
GAPVD1-202ENST00000297933 SPRR1AP35321 89 aa4.19□□□□□ -1.74
GAPVD1-202ENST00000297933 SPINK7P58062 85 aa4.19□□□□□ -1.74
GAPVD1-202ENST00000297933 CHD7Q9P2D1 2997 aa4.18□□□□□ -1.74
GAPVD1-202ENST00000297933 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
GAPVD1-202ENST00000297933 FP248Q71RG6 208 aaPredicted RBP4.18□□□□□ -1.74
GAPVD1-202ENST00000297933 R4GN34 69 aa4.18□□□□□ -1.74
GAPVD1-202ENST00000297933 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
GAPVD1-202ENST00000297933 CFAP46Q8IYW2 2715 aa4.17□□□□□ -1.74
GAPVD1-202ENST00000297933 MAST4O15021 2626 aa4.17□□□□□ -1.74
GAPVD1-202ENST00000297933 SPRR1BP22528 89 aa4.16□□□□□ -1.74
GAPVD1-202ENST00000297933 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
GAPVD1-202ENST00000297933 ATRQ13535 2644 aa4.16□□□□□ -1.74
GAPVD1-202ENST00000297933 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.74
GAPVD1-202ENST00000297933 Q5W150 140 aa4.15□□□□□ -1.75
GAPVD1-202ENST00000297933 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms