RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 NDUFV3P56181 108 aaKnown RBP4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 RPL18AQ02543 176 aaKnown RBP4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 HIGD2BQ4VC39 106 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 KRTAP26-1Q6PEX3 210 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 C15orf56Q8N910 161 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 Q8NDZ9 215 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 DIRC1Q969H9 104 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
PRKAA1-201ENST00000296800 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 TMEM256-PLSCR3K7ERE1 68 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 ESRGQ1W209 222 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 SMCR5Q8TEV8 140 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
PRKAA1-201ENST00000296800 Q6JHZ5 121 aa4.92□□□□□ -1.62
PRKAA1-201ENST00000296800 Q6ZRU5 148 aa4.92□□□□□ -1.62
PRKAA1-201ENST00000296800 IGKV2D-24A0A075B6R9 120 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 hADV29S1A0JD25 119 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 VPREB1P12018 145 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 C9orf129Q5T035 196 aaKnown RBP4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 TM2D3Q9BRN9 247 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 KRTAP4-4Q9BYR3 166 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 DNAH3Q8TD57 4116 aa4.91□□□□□ -1.62
PRKAA1-201ENST00000296800 VWFP04275 2813 aa4.9□□□□□ -1.62
PRKAA1-201ENST00000296800 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 M0R378 163 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 CCKP06307 115 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 RMI2Q96E14 147 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 XAGE1AQ9HD64 81 aa4.9□□□□□ -1.63
PRKAA1-201ENST00000296800 RYR1P21817 5038 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 HYDINQ4G0P3 5121 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 FAM236AA0A1B0GUQ0 79 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 FAM236BA0A1B0GV22 79 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 COX7BP24311 80 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
PRKAA1-201ENST00000296800 ZNF73O43830 326 aaPredicted RBP4.88□□□□□ -1.63
PRKAA1-201ENST00000296800 MT3P25713 68 aa4.88□□□□□ -1.63
PRKAA1-201ENST00000296800 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
PRKAA1-201ENST00000296800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
PRKAA1-201ENST00000296800 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 K7EIL1 84 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 Q6ZQY7 126 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 MRAPQ8TCY5 172 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 UPK3BQ9BT76 320 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 LINC00588Q9Y4M8 146 aa4.87□□□□□ -1.63
PRKAA1-201ENST00000296800 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
PRKAA1-201ENST00000296800 LAMTOR3Q9UHA4 124 aa4.86□□□□□ -1.63
PRKAA1-201ENST00000296800 ATOX1O00244 68 aa4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 PDE6GP18545 87 aa4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 HIST1H4AP62805 103 aaKnown RBP4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 Q6ZQT0 140 aa4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 Q6ZRP5 223 aa4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
PRKAA1-201ENST00000296800 IGLV5-37A0A075B6J1 123 aa4.84□□□□□ -1.63
PRKAA1-201ENST00000296800 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
PRKAA1-201ENST00000296800 PRYO14603 147 aa4.84□□□□□ -1.63
PRKAA1-201ENST00000296800 DSCR8Q96T75 97 aa4.84□□□□□ -1.63
PRKAA1-201ENST00000296800 UBL5Q9BZL1 73 aa4.84□□□□□ -1.63
PRKAA1-201ENST00000296800 IGKV3D-7A0A0C4DH55 119 aa4.83□□□□□ -1.64
PRKAA1-201ENST00000296800 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
PRKAA1-201ENST00000296800 PRB2P02812 416 aaPredicted RBP4.83□□□□□ -1.64
PRKAA1-201ENST00000296800 KCNQ1DNQ9H478 68 aa4.82□□□□□ -1.64
PRKAA1-201ENST00000296800 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
PRKAA1-201ENST00000296800 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
PRKAA1-201ENST00000296800 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
PRKAA1-201ENST00000296800 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
PRKAA1-201ENST00000296800 UQCRQO14949 82 aa4.8□□□□□ -1.64
PRKAA1-201ENST00000296800 COX7CP15954 63 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 CASC10Q5T4H9 136 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 C9orf153Q5TBE3 101 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 UBE2DNLQ8IWF7 75 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 C3orf22Q8N5N4 141 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 DHRS4-AS1Q9P1J3 65 aa4.79□□□□□ -1.64
PRKAA1-201ENST00000296800 ETDCA0A1B0GVM5 59 aa4.78□□□□□ -1.64
PRKAA1-201ENST00000296800 SPRR1AP35321 89 aa4.78□□□□□ -1.64
PRKAA1-201ENST00000296800 C14orf177Q52M58 125 aa4.78□□□□□ -1.64
PRKAA1-201ENST00000296800 Q6ZRX8 168 aa4.78□□□□□ -1.64
PRKAA1-201ENST00000296800 Q6ZVQ6 151 aa4.78□□□□□ -1.64
PRKAA1-201ENST00000296800 A0A087WVE0 104 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 CXCL6P80162 114 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 B9D2Q9BPU9 175 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 PKIGQ9Y2B9 76 aa4.77□□□□□ -1.65
PRKAA1-201ENST00000296800 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms