RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 TRBV7-4A0A0J9YYF1 115 aa12.84□□□□□ -0.35
NKX6-1-201ENST00000295886 LINC00528Q8N1L1 170 aa12.83□□□□□ -0.36
NKX6-1-201ENST00000295886 BCE1O60756 84 aa12.82□□□□□ -0.36
NKX6-1-201ENST00000295886 SERTAD4-AS1Q5TG53 156 aa12.81□□□□□ -0.36
NKX6-1-201ENST00000295886 SYCNQ0VAF6 134 aa12.81□□□□□ -0.36
NKX6-1-201ENST00000295886 RMI2Q96E14 147 aa12.81□□□□□ -0.36
NKX6-1-201ENST00000295886 SERP1Q9Y6X1 66 aa12.81□□□□□ -0.36
NKX6-1-201ENST00000295886 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
NKX6-1-201ENST00000295886 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
NKX6-1-201ENST00000295886 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
NKX6-1-201ENST00000295886 PDE6GP18545 87 aa12.79□□□□□ -0.36
NKX6-1-201ENST00000295886 KLKP1Q107X0 134 aa12.79□□□□□ -0.36
NKX6-1-201ENST00000295886 LINC01556Q5JQF7 62 aa12.79□□□□□ -0.36
NKX6-1-201ENST00000295886 TRBV7-6A0A0J9YX20 115 aa12.78□□□□□ -0.36
NKX6-1-201ENST00000295886 CXCL6P80162 114 aa12.77□□□□□ -0.36
NKX6-1-201ENST00000295886 BAHCC1Q9P281 2608 aa12.77□□□□□ -0.37
NKX6-1-201ENST00000295886 F8WEM9 126 aa12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 H3BQ85 93 aa12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 NKAPP1Q8N9T2 125 aa12.76□□□□□ -0.37
NKX6-1-201ENST00000295886 RPL37AP8A6NKH3 93 aa12.75□□□□□ -0.37
NKX6-1-201ENST00000295886 KRTAP24-1Q3LI83 254 aa12.75□□□□□ -0.37
NKX6-1-201ENST00000295886 Q8N9L7 120 aa12.75□□□□□ -0.37
NKX6-1-201ENST00000295886 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
NKX6-1-201ENST00000295886 FAM168BA1KXE4 195 aa12.75□□□□□ -0.37
NKX6-1-201ENST00000295886 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
NKX6-1-201ENST00000295886 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
NKX6-1-201ENST00000295886 C3orf84H3BNL1 204 aa12.71□□□□□ -0.37
NKX6-1-201ENST00000295886 KCNQ1DNQ9H478 68 aa12.69□□□□□ -0.38
NKX6-1-201ENST00000295886 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
NKX6-1-201ENST00000295886 Q8N377 158 aa12.68□□□□□ -0.38
NKX6-1-201ENST00000295886 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
NKX6-1-201ENST00000295886 LINC00588Q9Y4M8 146 aa12.68□□□□□ -0.38
NKX6-1-201ENST00000295886 LINC00336Q6ZUF6 198 aa12.67□□□□□ -0.38
NKX6-1-201ENST00000295886 MRAPQ8TCY5 172 aa12.66□□□□□ -0.38
NKX6-1-201ENST00000295886 SMIM26A0A096LP01 95 aa12.65□□□□□ -0.38
NKX6-1-201ENST00000295886 NREPQ16612 68 aa12.65□□□□□ -0.38
NKX6-1-201ENST00000295886 FP248Q71RG6 208 aaPredicted RBP12.65□□□□□ -0.38
NKX6-1-201ENST00000295886 Q9BRP9 147 aa12.64□□□□□ -0.39
NKX6-1-201ENST00000295886 BPY2O14599 106 aa12.63□□□□□ -0.39
NKX6-1-201ENST00000295886 NDUFC1O43677 76 aa12.63□□□□□ -0.39
NKX6-1-201ENST00000295886 KRTAP7-1Q8IUC3 87 aa12.63□□□□□ -0.39
NKX6-1-201ENST00000295886 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
NKX6-1-201ENST00000295886 DNAH3Q8TD57 4116 aa12.62□□□□□ -0.39
NKX6-1-201ENST00000295886 LINC00474Q9P2X8 69 aa12.61□□□□□ -0.39
NKX6-1-201ENST00000295886 LYSTQ99698 3801 aa12.61□□□□□ -0.39
NKX6-1-201ENST00000295886 TMEM254Q8TBM7 123 aa12.6□□□□□ -0.39
NKX6-1-201ENST00000295886 Q6ZRX8 168 aa12.6□□□□□ -0.39
NKX6-1-201ENST00000295886 PRO0628Q9UI54 55 aa12.6□□□□□ -0.39
NKX6-1-201ENST00000295886 F8WDY8 70 aa12.59□□□□□ -0.39
NKX6-1-201ENST00000295886 IGLV1-50A0A075B6I6 118 aa12.58□□□□□ -0.4
NKX6-1-201ENST00000295886 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.4
NKX6-1-201ENST00000295886 IGKV4-1P06312 121 aa12.58□□□□□ -0.4
NKX6-1-201ENST00000295886 DNAH1Q9P2D7 4330 aa12.58□□□□□ -0.4
NKX6-1-201ENST00000295886 ERC2-IT1O76042 136 aa12.58□□□□□ -0.4
NKX6-1-201ENST00000295886 KRTAP4-16G5E9R7 235 aaPredicted RBP12.57□□□□□ -0.4
NKX6-1-201ENST00000295886 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
NKX6-1-201ENST00000295886 DNAH10Q8IVF4 4471 aa12.56□□□□□ -0.4
NKX6-1-201ENST00000295886 ATP5EP56381 51 aaPredicted RBP12.55□□□□□ -0.4
NKX6-1-201ENST00000295886 IGLV5-48A0A075B6I7 105 aa12.54□□□□□ -0.4
NKX6-1-201ENST00000295886 A0A1W2PNM2 257 aa12.54□□□□□ -0.4
NKX6-1-201ENST00000295886 DHRS4-AS1Q9P1J3 65 aa12.54□□□□□ -0.4
NKX6-1-201ENST00000295886 HUWE1Q7Z6Z7 4374 aaKnown RBP12.53□□□□□ -0.4
NKX6-1-201ENST00000295886 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.4
NKX6-1-201ENST00000295886 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.4
NKX6-1-201ENST00000295886 UBE2BP63146 152 aa12.52□□□□□ -0.41
NKX6-1-201ENST00000295886 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 PRYO14603 147 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 C1orf137Q5JT78 98 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 A0A0G2JQZ4 141 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 A0A1W2PNN7 141 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 SPRR1AP35321 89 aa12.51□□□□□ -0.41
NKX6-1-201ENST00000295886 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
NKX6-1-201ENST00000295886 FUSP35637 526 aaKnown RBP eCLIP12.49□□□□□ -0.41
NKX6-1-201ENST00000295886 OCR1Q9BZK8 76 aa12.49□□□□□ -0.41
NKX6-1-201ENST00000295886 STAB2Q8WWQ8 2551 aa12.49□□□□□ -0.41
NKX6-1-201ENST00000295886 FAM229BQ4G0N7 80 aa12.48□□□□□ -0.41
NKX6-1-201ENST00000295886 IGLV5-37A0A075B6J1 123 aa12.48□□□□□ -0.41
NKX6-1-201ENST00000295886 COL7A1Q02388 2944 aa12.47□□□□□ -0.41
NKX6-1-201ENST00000295886 IGKV2-24A0A0C4DH68 120 aa12.47□□□□□ -0.41
NKX6-1-201ENST00000295886 TNP2Q05952 138 aa12.47□□□□□ -0.41
NKX6-1-201ENST00000295886 SRRM2Q9UQ35 2752 aaKnown RBP12.46□□□□□ -0.41
NKX6-1-201ENST00000295886 A0A0U1RQV1 116 aa12.46□□□□□ -0.41
NKX6-1-201ENST00000295886 MPLKIPQ8TAP9 179 aa12.46□□□□□ -0.41
NKX6-1-201ENST00000295886 TENM2Q9NT68 2774 aa12.46□□□□□ -0.42
NKX6-1-201ENST00000295886 K7EIL1 84 aa12.45□□□□□ -0.42
NKX6-1-201ENST00000295886 HIGD2AQ9BW72 106 aa12.44□□□□□ -0.42
NKX6-1-201ENST00000295886 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
NKX6-1-201ENST00000295886 BRK1Q8WUW1 75 aa12.44□□□□□ -0.42
NKX6-1-201ENST00000295886 PKIGQ9Y2B9 76 aa12.43□□□□□ -0.42
NKX6-1-201ENST00000295886 REG3GQ6UW15 175 aa12.42□□□□□ -0.42
NKX6-1-201ENST00000295886 Q8NBF4 154 aa12.42□□□□□ -0.42
NKX6-1-201ENST00000295886 PRLHP81277 87 aa12.41□□□□□ -0.42
NKX6-1-201ENST00000295886 SMIM29Q86T20 159 aa12.41□□□□□ -0.42
NKX6-1-201ENST00000295886 A0A096LNI7 61 aa12.41□□□□□ -0.42
NKX6-1-201ENST00000295886 DNAH9Q9NYC9 4486 aa12.41□□□□□ -0.42
NKX6-1-201ENST00000295886 FAM30AQ9NZY2 134 aa12.41□□□□□ -0.42
NKX6-1-201ENST00000295886 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms