RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
PDPN-201ENST00000294489 Q6ZRN7 208 aaPredicted RBP5.92□□□□□ -1.46
PDPN-201ENST00000294489 C4orf26Q17RF5 130 aa5.92□□□□□ -1.46
PDPN-201ENST00000294489 SERTAD4-AS1Q5TG53 156 aa5.92□□□□□ -1.46
PDPN-201ENST00000294489 J3KT08 172 aa5.91□□□□□ -1.46
PDPN-201ENST00000294489 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
PDPN-201ENST00000294489 Q6ZQY7 126 aa5.91□□□□□ -1.46
PDPN-201ENST00000294489 C14orf177Q52M58 125 aa5.91□□□□□ -1.46
PDPN-201ENST00000294489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.91□□□□□ -1.46
PDPN-201ENST00000294489 C7orf33Q8WU49 177 aa5.91□□□□□ -1.46
PDPN-201ENST00000294489 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
PDPN-201ENST00000294489 KCNQ1DNQ9H478 68 aa5.9□□□□□ -1.46
PDPN-201ENST00000294489 FBN3Q75N90 2809 aa5.9□□□□□ -1.46
PDPN-201ENST00000294489 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
PDPN-201ENST00000294489 LRCOL1A6NCL2 159 aa5.9□□□□□ -1.47
PDPN-201ENST00000294489 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
PDPN-201ENST00000294489 Q6ZR54 194 aa5.89□□□□□ -1.47
PDPN-201ENST00000294489 LAMTOR3Q9UHA4 124 aa5.89□□□□□ -1.47
PDPN-201ENST00000294489 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
PDPN-201ENST00000294489 LINC00643Q86TS7 51 aa5.88□□□□□ -1.47
PDPN-201ENST00000294489 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
PDPN-201ENST00000294489 CCKP06307 115 aa5.88□□□□□ -1.47
PDPN-201ENST00000294489 RBM3P98179 157 aaKnown RBP5.88□□□□□ -1.47
PDPN-201ENST00000294489 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
PDPN-201ENST00000294489 PRYO14603 147 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 Q6Q795 121 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 MRPL55Q7Z7F7 128 aaKnown RBP5.87□□□□□ -1.47
PDPN-201ENST00000294489 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
PDPN-201ENST00000294489 RPL37AP8A6NKH3 93 aa5.86□□□□□ -1.47
PDPN-201ENST00000294489 C16orf90A8MZG2 172 aa5.86□□□□□ -1.47
PDPN-201ENST00000294489 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
PDPN-201ENST00000294489 SMCR5Q8TEV8 140 aa5.86□□□□□ -1.47
PDPN-201ENST00000294489 FAM236DA0A1B0GTK5 79 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 FAM236CP0DP71 79 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
PDPN-201ENST00000294489 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 DSCR8Q96T75 97 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
PDPN-201ENST00000294489 A0A096LNI7 61 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 IGKV2-24A0A0C4DH68 120 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 PDE6GP18545 87 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 DHRS4-AS1Q9P1J3 65 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
PDPN-201ENST00000294489 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
PDPN-201ENST00000294489 SPRR1AP35321 89 aa5.83□□□□□ -1.48
PDPN-201ENST00000294489 Q6ZRX8 168 aa5.83□□□□□ -1.48
PDPN-201ENST00000294489 Q6ZQT0 140 aa5.83□□□□□ -1.48
PDPN-201ENST00000294489 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
PDPN-201ENST00000294489 C3orf84H3BNL1 204 aa5.82□□□□□ -1.48
PDPN-201ENST00000294489 M0R2N4 97 aa5.82□□□□□ -1.48
PDPN-201ENST00000294489 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
PDPN-201ENST00000294489 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
PDPN-201ENST00000294489 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
PDPN-201ENST00000294489 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
PDPN-201ENST00000294489 DNAH2Q9P225 4427 aa5.81□□□□□ -1.48
PDPN-201ENST00000294489 LINC00336Q6ZUF6 198 aa5.81□□□□□ -1.48
PDPN-201ENST00000294489 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 A0A1W2PNN7 141 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 UBL5Q9BZL1 73 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 A0A087WTM6 91 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 EPM2AB3EWF7 344 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 DEFB105AQ8NG35 78 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 LINC00474Q9P2X8 69 aa5.8□□□□□ -1.48
PDPN-201ENST00000294489 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 Q6JHZ5 121 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 Q9BRP9 147 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 UBE2BP63146 152 aa5.79□□□□□ -1.48
PDPN-201ENST00000294489 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
PDPN-201ENST00000294489 DNAH17Q9UFH2 4485 aa5.78□□□□□ -1.48
PDPN-201ENST00000294489 HECTD4Q9Y4D8 3996 aa5.78□□□□□ -1.48
PDPN-201ENST00000294489 CHTF8P0CG12 524 aa5.78□□□□□ -1.48
PDPN-201ENST00000294489 Q8N377 158 aa5.78□□□□□ -1.48
PDPN-201ENST00000294489 C9orf153Q5TBE3 101 aa5.77□□□□□ -1.49
PDPN-201ENST00000294489 IGKV3D-7A0A0C4DH55 119 aa5.77□□□□□ -1.49
PDPN-201ENST00000294489 C1orf134Q5TEV5 83 aa5.77□□□□□ -1.49
PDPN-201ENST00000294489 ATP5EP2Q5VTU8 51 aa5.77□□□□□ -1.49
PDPN-201ENST00000294489 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
PDPN-201ENST00000294489 LY6G6CO95867 125 aa5.76□□□□□ -1.49
PDPN-201ENST00000294489 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
PDPN-201ENST00000294489 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
PDPN-201ENST00000294489 IGLV5-48A0A075B6I7 105 aa5.75□□□□□ -1.49
PDPN-201ENST00000294489 RPS28P62857 69 aaKnown RBP5.75□□□□□ -1.49
PDPN-201ENST00000294489 PHF5AQ7RTV0 110 aaKnown RBP5.75□□□□□ -1.49
PDPN-201ENST00000294489 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
PDPN-201ENST00000294489 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
PDPN-201ENST00000294489 H3BS24 57 aa5.73□□□□□ -1.49
PDPN-201ENST00000294489 PRLHP81277 87 aa5.73□□□□□ -1.49
PDPN-201ENST00000294489 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
PDPN-201ENST00000294489 Q6ZVQ6 151 aa5.73□□□□□ -1.49
PDPN-201ENST00000294489 TGP01266 2768 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms