RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 XAGE1AQ9HD64 81 aa11.37□□□□□ -0.59
CCDC78-201ENST00000293889 C16orf90A8MZG2 172 aa11.36□□□□□ -0.59
CCDC78-201ENST00000293889 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
CCDC78-201ENST00000293889 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
CCDC78-201ENST00000293889 INAFM2P0DMQ5 153 aa11.35□□□□□ -0.59
CCDC78-201ENST00000293889 IMUPQ9GZP8 106 aa11.35□□□□□ -0.59
CCDC78-201ENST00000293889 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
CCDC78-201ENST00000293889 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
CCDC78-201ENST00000293889 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
CCDC78-201ENST00000293889 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
CCDC78-201ENST00000293889 NDUFC2O95298 119 aa11.34□□□□□ -0.59
CCDC78-201ENST00000293889 OBSCN-AS1Q96MR7 158 aa11.34□□□□□ -0.59
CCDC78-201ENST00000293889 KRTAP10-1P60331 282 aa11.33□□□□□ -0.6
CCDC78-201ENST00000293889 A0A1B0GX51 115 aa11.32□□□□□ -0.6
CCDC78-201ENST00000293889 PANO1I0J062 215 aa11.32□□□□□ -0.6
CCDC78-201ENST00000293889 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
CCDC78-201ENST00000293889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
CCDC78-201ENST00000293889 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
CCDC78-201ENST00000293889 LINC00643Q86TS7 51 aa11.31□□□□□ -0.6
CCDC78-201ENST00000293889 LINC00167Q96N53 147 aa11.31□□□□□ -0.6
CCDC78-201ENST00000293889 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
CCDC78-201ENST00000293889 Q8NDZ9 215 aa11.29□□□□□ -0.6
CCDC78-201ENST00000293889 SPACA4Q8TDM5 124 aa11.29□□□□□ -0.6
CCDC78-201ENST00000293889 A0A087WYN8 130 aa11.28□□□□□ -0.6
CCDC78-201ENST00000293889 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
CCDC78-201ENST00000293889 DNAH8Q96JB1 4490 aa11.28□□□□□ -0.6
CCDC78-201ENST00000293889 DNAL4O96015 105 aa11.27□□□□□ -0.6
CCDC78-201ENST00000293889 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.6
CCDC78-201ENST00000293889 SERTAD4-AS1Q5TG53 156 aa11.27□□□□□ -0.61
CCDC78-201ENST00000293889 DPH3Q96FX2 82 aa11.27□□□□□ -0.61
CCDC78-201ENST00000293889 A0A1W2PNN7 141 aa11.26□□□□□ -0.61
CCDC78-201ENST00000293889 KRTAP7-1Q8IUC3 87 aa11.26□□□□□ -0.61
CCDC78-201ENST00000293889 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
CCDC78-201ENST00000293889 PRR3P79522 188 aaKnown RBP11.25□□□□□ -0.61
CCDC78-201ENST00000293889 Q6ZSA8 131 aa11.25□□□□□ -0.61
CCDC78-201ENST00000293889 VPREB1P12018 145 aa11.24□□□□□ -0.61
CCDC78-201ENST00000293889 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-201ENST00000293889 SMCR5Q8TEV8 140 aa11.24□□□□□ -0.61
CCDC78-201ENST00000293889 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
CCDC78-201ENST00000293889 TMEM126AQ9H061 195 aa11.22□□□□□ -0.61
CCDC78-201ENST00000293889 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
CCDC78-201ENST00000293889 IGLV5-37A0A075B6J1 123 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
CCDC78-201ENST00000293889 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 NCR3O14931 201 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 NKAPP1Q8N9T2 125 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 PLAC8Q9NZF1 115 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
CCDC78-201ENST00000293889 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
CCDC78-201ENST00000293889 HAMPP81172 84 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 M0R378 163 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
CCDC78-201ENST00000293889 PHF5AQ7RTV0 110 aaKnown RBP11.16□□□□□ -0.62
CCDC78-201ENST00000293889 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
CCDC78-201ENST00000293889 JMJD7-PLA2G4BH0Y9G9 81 aa11.15□□□□□ -0.62
CCDC78-201ENST00000293889 HSPG2P98160 4391 aa11.14□□□□□ -0.63
CCDC78-201ENST00000293889 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
CCDC78-201ENST00000293889 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
CCDC78-201ENST00000293889 Q6JHZ5 121 aa11.13□□□□□ -0.63
CCDC78-201ENST00000293889 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
CCDC78-201ENST00000293889 RYR1P21817 5038 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 CCKP06307 115 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
CCDC78-201ENST00000293889 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
CCDC78-201ENST00000293889 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
CCDC78-201ENST00000293889 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
CCDC78-201ENST00000293889 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
CCDC78-201ENST00000293889 B5MCH6 92 aa11.09□□□□□ -0.63
CCDC78-201ENST00000293889 KRTAP17-1Q9BYP8 105 aa11.09□□□□□ -0.63
CCDC78-201ENST00000293889 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
CCDC78-201ENST00000293889 H3BQ85 93 aa11.09□□□□□ -0.63
CCDC78-201ENST00000293889 KRTAP11-1Q8IUC1 163 aa11.09□□□□□ -0.63
CCDC78-201ENST00000293889 UBE2BP63146 152 aa11.08□□□□□ -0.64
CCDC78-201ENST00000293889 LINC00846Q9NV44 126 aa11.08□□□□□ -0.64
CCDC78-201ENST00000293889 C6orf99Q4VX62 202 aa11.07□□□□□ -0.64
CCDC78-201ENST00000293889 HERC2O95714 4834 aa11.04□□□□□ -0.64
CCDC78-201ENST00000293889 KCNQ1DNQ9H478 68 aa11.04□□□□□ -0.64
CCDC78-201ENST00000293889 TRAV23DV6A0A075B6W5 121 aa11.03□□□□□ -0.64
CCDC78-201ENST00000293889 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
CCDC78-201ENST00000293889 hADV29S1A0JD25 119 aa11.02□□□□□ -0.64
CCDC78-201ENST00000293889 SMR3BP02814 79 aaPredicted RBP11.02□□□□□ -0.64
CCDC78-201ENST00000293889 ATP5EP2Q5VTU8 51 aa11.02□□□□□ -0.64
CCDC78-201ENST00000293889 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.65
CCDC78-201ENST00000293889 LOC110117498A0A087WWA1 95 aa11.01□□□□□ -0.65
CCDC78-201ENST00000293889 ATOX1O00244 68 aa11.01□□□□□ -0.65
CCDC78-201ENST00000293889 PRYO14603 147 aa11.01□□□□□ -0.65
CCDC78-201ENST00000293889 UQCRQO14949 82 aa11.01□□□□□ -0.65
CCDC78-201ENST00000293889 REG3GQ6UW15 175 aa11□□□□□ -0.65
CCDC78-201ENST00000293889 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
CCDC78-201ENST00000293889 PSORS1C2Q9UIG4 136 aa11□□□□□ -0.65
CCDC78-201ENST00000293889 ZNF73O43830 326 aaPredicted RBP10.98□□□□□ -0.65
CCDC78-201ENST00000293889 FAT1Q14517 4588 aa10.98□□□□□ -0.65
CCDC78-201ENST00000293889 SPRR1AP35321 89 aa10.98□□□□□ -0.65
CCDC78-201ENST00000293889 Q8N1X5 172 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms