RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 LOC110117498A0A087WWA1 95 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 HIGD2BQ4VC39 106 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 Q6ZR54 194 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 ZNF561-AS1K7EIQ3 104 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 C6orf99Q4VX62 202 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 Q8NDZ9 215 aa7.52□□□□□ -1.21
CHRNB3-201ENST00000289957 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
CHRNB3-201ENST00000289957 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
CHRNB3-201ENST00000289957 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
CHRNB3-201ENST00000289957 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
CHRNB3-201ENST00000289957 DNAH11Q96DT5 4516 aa7.51□□□□□ -1.21
CHRNB3-201ENST00000289957 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
CHRNB3-201ENST00000289957 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
CHRNB3-201ENST00000289957 PKHD1P08F94 4074 aa7.49□□□□□ -1.21
CHRNB3-201ENST00000289957 hADV29S1A0JD25 119 aa7.49□□□□□ -1.21
CHRNB3-201ENST00000289957 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
CHRNB3-201ENST00000289957 PDE6GP18545 87 aa7.49□□□□□ -1.21
CHRNB3-201ENST00000289957 PKD1P98161 4303 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 TRBV7-6A0A0J9YX20 115 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 BCE1O60756 84 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 C10orf25Q5T742 122 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 UNQ6190/PRO20217Q6UXQ8 127 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 Q6ZQT0 140 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
CHRNB3-201ENST00000289957 PSCAO43653 123 aa7.46□□□□□ -1.22
CHRNB3-201ENST00000289957 GHRHP01286 108 aa7.46□□□□□ -1.22
CHRNB3-201ENST00000289957 TMEM258P61165 79 aa7.46□□□□□ -1.22
CHRNB3-201ENST00000289957 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
CHRNB3-201ENST00000289957 LCE6AA0A183 80 aa7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 DIRC1Q969H9 104 aa7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 DNAH5Q8TE73 4624 aa7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 A0A087WVE0 104 aa7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 RPS28P62857 69 aaKnown RBP7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
CHRNB3-201ENST00000289957 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 RTL8CO15255 209 aa7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 F8WDY8 70 aa7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 J3KT08 172 aa7.44□□□□□ -1.22
CHRNB3-201ENST00000289957 C1orf134Q5TEV5 83 aa7.43□□□□□ -1.22
CHRNB3-201ENST00000289957 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
CHRNB3-201ENST00000289957 TNP2Q05952 138 aa7.43□□□□□ -1.22
CHRNB3-201ENST00000289957 ELOF1P60002 83 aaKnown RBP7.42□□□□□ -1.22
CHRNB3-201ENST00000289957 Q6ZRU5 148 aa7.42□□□□□ -1.22
CHRNB3-201ENST00000289957 RMI2Q96E14 147 aa7.41□□□□□ -1.22
CHRNB3-201ENST00000289957 VPREB1P12018 145 aa7.41□□□□□ -1.22
CHRNB3-201ENST00000289957 COX7BP24311 80 aa7.41□□□□□ -1.22
CHRNB3-201ENST00000289957 Q6ZQY7 126 aa7.41□□□□□ -1.22
CHRNB3-201ENST00000289957 CXCL6P80162 114 aa7.4□□□□□ -1.22
CHRNB3-201ENST00000289957 DSCR8Q96T75 97 aa7.4□□□□□ -1.22
CHRNB3-201ENST00000289957 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
CHRNB3-201ENST00000289957 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.23
CHRNB3-201ENST00000289957 ZNF73O43830 326 aaPredicted RBP7.4□□□□□ -1.23
CHRNB3-201ENST00000289957 A0A087WTM6 91 aa7.39□□□□□ -1.23
CHRNB3-201ENST00000289957 M0R378 163 aa7.39□□□□□ -1.23
CHRNB3-201ENST00000289957 Q6ZVQ6 151 aa7.39□□□□□ -1.23
CHRNB3-201ENST00000289957 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
CHRNB3-201ENST00000289957 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
CHRNB3-201ENST00000289957 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
CHRNB3-201ENST00000289957 LINC01547P58512 204 aaPredicted RBP7.37□□□□□ -1.23
CHRNB3-201ENST00000289957 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
CHRNB3-201ENST00000289957 KRTAP10-2P60368 255 aa7.36□□□□□ -1.23
CHRNB3-201ENST00000289957 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
CHRNB3-201ENST00000289957 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
CHRNB3-201ENST00000289957 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
CHRNB3-201ENST00000289957 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
CHRNB3-201ENST00000289957 DNAH8Q96JB1 4490 aa7.34□□□□□ -1.23
CHRNB3-201ENST00000289957 Q6ZRP5 223 aa7.34□□□□□ -1.24
CHRNB3-201ENST00000289957 DPH3Q96FX2 82 aa7.33□□□□□ -1.24
CHRNB3-201ENST00000289957 LRP1BQ9NZR2 4599 aa7.32□□□□□ -1.24
CHRNB3-201ENST00000289957 PANO1I0J062 215 aa7.32□□□□□ -1.24
CHRNB3-201ENST00000289957 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
CHRNB3-201ENST00000289957 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
CHRNB3-201ENST00000289957 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
CHRNB3-201ENST00000289957 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
CHRNB3-201ENST00000289957 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
CHRNB3-201ENST00000289957 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
CHRNB3-201ENST00000289957 HAMPP81172 84 aa7.3□□□□□ -1.24
CHRNB3-201ENST00000289957 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
CHRNB3-201ENST00000289957 A0A096LNI7 61 aa7.29□□□□□ -1.24
CHRNB3-201ENST00000289957 IGKV2-24A0A0C4DH68 120 aa7.29□□□□□ -1.24
CHRNB3-201ENST00000289957 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
CHRNB3-201ENST00000289957 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
CHRNB3-201ENST00000289957 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
CHRNB3-201ENST00000289957 A0A1B0GW54 56 aa7.28□□□□□ -1.24
CHRNB3-201ENST00000289957 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
CHRNB3-201ENST00000289957 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.24
CHRNB3-201ENST00000289957 C20orf197Q8N268 126 aa7.27□□□□□ -1.24
CHRNB3-201ENST00000289957 EPM2AB3EWF7 344 aa7.27□□□□□ -1.25
CHRNB3-201ENST00000289957 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
CHRNB3-201ENST00000289957 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
CHRNB3-201ENST00000289957 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
CHRNB3-201ENST00000289957 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
CHRNB3-201ENST00000289957 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
CHRNB3-201ENST00000289957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms