RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MDFIQ99750 246 aa6.97□□□□□ -1.29
SKA1-201ENST00000285116 NREPQ16612 68 aa6.96□□□□□ -1.3
SKA1-201ENST00000285116 A0A096LPF7 62 aa6.96□□□□□ -1.3
SKA1-201ENST00000285116 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
SKA1-201ENST00000285116 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
SKA1-201ENST00000285116 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
SKA1-201ENST00000285116 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
SKA1-201ENST00000285116 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
SKA1-201ENST00000285116 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
SKA1-201ENST00000285116 IGLV10-54A0A075B6I4 117 aa6.94□□□□□ -1.3
SKA1-201ENST00000285116 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
SKA1-201ENST00000285116 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
SKA1-201ENST00000285116 BPY2O14599 106 aa6.94□□□□□ -1.3
SKA1-201ENST00000285116 H3BNG1 76 aa6.93□□□□□ -1.3
SKA1-201ENST00000285116 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
SKA1-201ENST00000285116 DIRC1Q969H9 104 aa6.93□□□□□ -1.3
SKA1-201ENST00000285116 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
SKA1-201ENST00000285116 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
SKA1-201ENST00000285116 F8WDY8 70 aa6.92□□□□□ -1.3
SKA1-201ENST00000285116 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
SKA1-201ENST00000285116 ELOF1P60002 83 aaKnown RBP6.91□□□□□ -1.3
SKA1-201ENST00000285116 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
SKA1-201ENST00000285116 COX7BP24311 80 aa6.9□□□□□ -1.3
SKA1-201ENST00000285116 PRYO14603 147 aa6.9□□□□□ -1.31
SKA1-201ENST00000285116 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
SKA1-201ENST00000285116 EGFEM1PQ0D2K5 195 aa6.89□□□□□ -1.31
SKA1-201ENST00000285116 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
SKA1-201ENST00000285116 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
SKA1-201ENST00000285116 VPREB1P12018 145 aa6.88□□□□□ -1.31
SKA1-201ENST00000285116 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
SKA1-201ENST00000285116 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
SKA1-201ENST00000285116 IGKV4-1P06312 121 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
SKA1-201ENST00000285116 FAM229BQ4G0N7 80 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 M0R378 163 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 ESRGQ1W209 222 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 LYSTQ99698 3801 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
SKA1-201ENST00000285116 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
SKA1-201ENST00000285116 Q6ZTC4 211 aa6.85□□□□□ -1.31
SKA1-201ENST00000285116 Q8N9L7 120 aa6.85□□□□□ -1.31
SKA1-201ENST00000285116 RETNQ9HD89 108 aa6.85□□□□□ -1.31
SKA1-201ENST00000285116 CMYA5Q8N3K9 4069 aa6.84□□□□□ -1.31
SKA1-201ENST00000285116 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
SKA1-201ENST00000285116 V9GYY9 64 aa6.83□□□□□ -1.32
SKA1-201ENST00000285116 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
SKA1-201ENST00000285116 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
SKA1-201ENST00000285116 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
SKA1-201ENST00000285116 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
SKA1-201ENST00000285116 A0A1B0GW54 56 aa6.81□□□□□ -1.32
SKA1-201ENST00000285116 HTN3P15516 51 aa6.81□□□□□ -1.32
SKA1-201ENST00000285116 Q6ZRU5 148 aa6.8□□□□□ -1.32
SKA1-201ENST00000285116 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
SKA1-201ENST00000285116 KPRPQ5T749 579 aaPredicted RBP6.8□□□□□ -1.32
SKA1-201ENST00000285116 WFDC10BQ8IUB3 73 aa6.8□□□□□ -1.32
SKA1-201ENST00000285116 KCNQ1DNQ9H478 68 aa6.8□□□□□ -1.32
SKA1-201ENST00000285116 LINC01556Q5JQF7 62 aa6.79□□□□□ -1.32
SKA1-201ENST00000285116 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
SKA1-201ENST00000285116 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
SKA1-201ENST00000285116 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
SKA1-201ENST00000285116 LCE6AA0A183 80 aa6.78□□□□□ -1.32
SKA1-201ENST00000285116 C3orf84H3BNL1 204 aa6.78□□□□□ -1.32
SKA1-201ENST00000285116 FBN3Q75N90 2809 aa6.77□□□□□ -1.33
SKA1-201ENST00000285116 IGLV5-37A0A075B6J1 123 aa6.77□□□□□ -1.33
SKA1-201ENST00000285116 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
SKA1-201ENST00000285116 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
SKA1-201ENST00000285116 SEC61GP60059 68 aa6.76□□□□□ -1.33
SKA1-201ENST00000285116 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
SKA1-201ENST00000285116 Q6ZRP5 223 aa6.76□□□□□ -1.33
SKA1-201ENST00000285116 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
SKA1-201ENST00000285116 Q1T7F1 81 aa6.75□□□□□ -1.33
SKA1-201ENST00000285116 PRR15Q8IV56 129 aa6.75□□□□□ -1.33
SKA1-201ENST00000285116 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
SKA1-201ENST00000285116 DHRS4-AS1Q9P1J3 65 aa6.74□□□□□ -1.33
SKA1-201ENST00000285116 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
SKA1-201ENST00000285116 SPRR1AP35321 89 aa6.73□□□□□ -1.33
SKA1-201ENST00000285116 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
SKA1-201ENST00000285116 Q8N377 158 aa6.73□□□□□ -1.33
SKA1-201ENST00000285116 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
SKA1-201ENST00000285116 ZCCHC13Q8WW36 166 aaKnown RBP6.73□□□□□ -1.33
SKA1-201ENST00000285116 DEFB105AQ8NG35 78 aa6.71□□□□□ -1.33
SKA1-201ENST00000285116 C7orf33Q8WU49 177 aa6.71□□□□□ -1.33
SKA1-201ENST00000285116 NKAPP1Q8N9T2 125 aa6.71□□□□□ -1.34
SKA1-201ENST00000285116 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
SKA1-201ENST00000285116 Q6ZRX8 168 aa6.7□□□□□ -1.34
SKA1-201ENST00000285116 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
SKA1-201ENST00000285116 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
SKA1-201ENST00000285116 SERTAD4-AS1Q5TG53 156 aa6.69□□□□□ -1.34
SKA1-201ENST00000285116 CYP4F30PQ9H0H9 118 aa6.69□□□□□ -1.34
SKA1-201ENST00000285116 PMAIP1Q13794 54 aa6.69□□□□□ -1.34
SKA1-201ENST00000285116 IGLV1-50A0A075B6I6 118 aa6.68□□□□□ -1.34
SKA1-201ENST00000285116 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
SKA1-201ENST00000285116 Q8NBF4 154 aa6.68□□□□□ -1.34
SKA1-201ENST00000285116 SPRR4Q96PI1 79 aa6.68□□□□□ -1.34
SKA1-201ENST00000285116 DEFB131BA0A096LNP1 70 aa6.67□□□□□ -1.34
SKA1-201ENST00000285116 DSCR10P59022 87 aa6.67□□□□□ -1.34
SKA1-201ENST00000285116 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
SKA1-201ENST00000285116 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
SKA1-201ENST00000285116 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms