RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KLKP1Q107X0 134 aa12.12□□□□□ -0.47
PDLIM3-201ENST00000284767 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
PDLIM3-201ENST00000284767 LYSTQ99698 3801 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 H7BZZ5 65 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 ZNF73O43830 326 aaPredicted RBP12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 COX7BP24311 80 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 Q5XG85 94 aa12.11□□□□□ -0.47
PDLIM3-201ENST00000284767 ELOF1P60002 83 aaKnown RBP12.1□□□□□ -0.47
PDLIM3-201ENST00000284767 HIGD2BQ4VC39 106 aa12.09□□□□□ -0.47
PDLIM3-201ENST00000284767 KRTAP26-1Q6PEX3 210 aa12.09□□□□□ -0.47
PDLIM3-201ENST00000284767 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
PDLIM3-201ENST00000284767 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
PDLIM3-201ENST00000284767 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
PDLIM3-201ENST00000284767 SERP1Q9Y6X1 66 aa12.07□□□□□ -0.48
PDLIM3-201ENST00000284767 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
PDLIM3-201ENST00000284767 C4orf26Q17RF5 130 aa12.06□□□□□ -0.48
PDLIM3-201ENST00000284767 IGKV2D-24A0A075B6R9 120 aa12.04□□□□□ -0.48
PDLIM3-201ENST00000284767 VPREB1P12018 145 aa12.03□□□□□ -0.48
PDLIM3-201ENST00000284767 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.48
PDLIM3-201ENST00000284767 DNHD1Q96M86 4753 aa12.02□□□□□ -0.48
PDLIM3-201ENST00000284767 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
PDLIM3-201ENST00000284767 M0R378 163 aa12.01□□□□□ -0.49
PDLIM3-201ENST00000284767 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
PDLIM3-201ENST00000284767 NDUFC1O43677 76 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 HRCT1Q6UXD1 115 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 TENM2Q9NT68 2774 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 RMI2Q96E14 147 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 SNURFQ9Y675 71 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 CSMD3Q7Z407 3707 aa12□□□□□ -0.49
PDLIM3-201ENST00000284767 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
PDLIM3-201ENST00000284767 SCXQ7RTU7 201 aa11.99□□□□□ -0.49
PDLIM3-201ENST00000284767 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
PDLIM3-201ENST00000284767 F8WEM9 126 aa11.97□□□□□ -0.49
PDLIM3-201ENST00000284767 CASC10Q5T4H9 136 aa11.97□□□□□ -0.49
PDLIM3-201ENST00000284767 Q6ZRU5 148 aa11.96□□□□□ -0.49
PDLIM3-201ENST00000284767 PRKDCP78527 4128 aaKnown RBP11.96□□□□□ -0.49
PDLIM3-201ENST00000284767 NREPQ16612 68 aa11.94□□□□□ -0.5
PDLIM3-201ENST00000284767 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
PDLIM3-201ENST00000284767 ATP5EP56381 51 aaPredicted RBP11.94□□□□□ -0.5
PDLIM3-201ENST00000284767 BPY2O14599 106 aa11.93□□□□□ -0.5
PDLIM3-201ENST00000284767 B9D2Q9BPU9 175 aa11.93□□□□□ -0.5
PDLIM3-201ENST00000284767 DNAH7Q8WXX0 4024 aa11.93□□□□□ -0.5
PDLIM3-201ENST00000284767 DNAH10Q8IVF4 4471 aa11.92□□□□□ -0.5
PDLIM3-201ENST00000284767 MEGF8Q7Z7M0 2845 aa11.91□□□□□ -0.5
PDLIM3-201ENST00000284767 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
PDLIM3-201ENST00000284767 IGKV4-1P06312 121 aa11.89□□□□□ -0.51
PDLIM3-201ENST00000284767 TMEM254Q8TBM7 123 aa11.89□□□□□ -0.51
PDLIM3-201ENST00000284767 F8WDY8 70 aa11.88□□□□□ -0.51
PDLIM3-201ENST00000284767 PLECQ15149 4684 aaKnown RBP11.88□□□□□ -0.51
PDLIM3-201ENST00000284767 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
PDLIM3-201ENST00000284767 Q6ZRP5 223 aa11.85□□□□□ -0.51
PDLIM3-201ENST00000284767 SYCNQ0VAF6 134 aa11.85□□□□□ -0.51
PDLIM3-201ENST00000284767 KCNQ1DNQ9H478 68 aa11.85□□□□□ -0.51
PDLIM3-201ENST00000284767 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
PDLIM3-201ENST00000284767 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
PDLIM3-201ENST00000284767 Q8N9L7 120 aa11.84□□□□□ -0.51
PDLIM3-201ENST00000284767 OCR1Q9BZK8 76 aa11.84□□□□□ -0.51
PDLIM3-201ENST00000284767 FP248Q71RG6 208 aaPredicted RBP11.82□□□□□ -0.52
PDLIM3-201ENST00000284767 IGLV5-48A0A075B6I7 105 aa11.82□□□□□ -0.52
PDLIM3-201ENST00000284767 A0A1B0GW54 56 aa11.81□□□□□ -0.52
PDLIM3-201ENST00000284767 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
PDLIM3-201ENST00000284767 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
PDLIM3-201ENST00000284767 UBE2DNLQ8IWF7 75 aa11.8□□□□□ -0.52
PDLIM3-201ENST00000284767 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
PDLIM3-201ENST00000284767 C3orf84H3BNL1 204 aa11.8□□□□□ -0.52
PDLIM3-201ENST00000284767 Q8N377 158 aa11.8□□□□□ -0.52
PDLIM3-201ENST00000284767 PRYO14603 147 aa11.78□□□□□ -0.52
PDLIM3-201ENST00000284767 C7orf33Q8WU49 177 aa11.77□□□□□ -0.52
PDLIM3-201ENST00000284767 DEFB105AQ8NG35 78 aa11.77□□□□□ -0.53
PDLIM3-201ENST00000284767 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
PDLIM3-201ENST00000284767 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDLIM3-201ENST00000284767 SERTAD4-AS1Q5TG53 156 aa11.75□□□□□ -0.53
PDLIM3-201ENST00000284767 PRO0628Q9UI54 55 aa11.75□□□□□ -0.53
PDLIM3-201ENST00000284767 LINC00336Q6ZUF6 198 aa11.75□□□□□ -0.53
PDLIM3-201ENST00000284767 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
PDLIM3-201ENST00000284767 Q6ZRX8 168 aa11.73□□□□□ -0.53
PDLIM3-201ENST00000284767 TLX1NBP0CAT3 122 aa11.73□□□□□ -0.53
PDLIM3-201ENST00000284767 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
PDLIM3-201ENST00000284767 LINC00474Q9P2X8 69 aa11.72□□□□□ -0.53
PDLIM3-201ENST00000284767 TNP2Q05952 138 aa11.7□□□□□ -0.54
PDLIM3-201ENST00000284767 A0A1W2PNM2 257 aa11.7□□□□□ -0.54
PDLIM3-201ENST00000284767 KRTAP4-16G5E9R7 235 aaPredicted RBP11.7□□□□□ -0.54
PDLIM3-201ENST00000284767 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
PDLIM3-201ENST00000284767 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
PDLIM3-201ENST00000284767 PSCAO43653 123 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 SPRR1AP35321 89 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 Q9BRP9 147 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 Q8NBF4 154 aa11.68□□□□□ -0.54
PDLIM3-201ENST00000284767 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
PDLIM3-201ENST00000284767 SMIM29Q86T20 159 aa11.67□□□□□ -0.54
PDLIM3-201ENST00000284767 LCE6AA0A183 80 aa11.67□□□□□ -0.54
PDLIM3-201ENST00000284767 ETDCA0A1B0GVM5 59 aa11.67□□□□□ -0.54
PDLIM3-201ENST00000284767 KRTAP7-1Q8IUC3 87 aa11.66□□□□□ -0.54
PDLIM3-201ENST00000284767 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
PDLIM3-201ENST00000284767 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms