RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 LCA10Q71F78 164 aa5.94□□□□□ -1.46
NIPBL-201ENST00000282516 K7EQZ3 153 aa5.93□□□□□ -1.46
NIPBL-201ENST00000282516 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
NIPBL-201ENST00000282516 LINC00483Q53H64 154 aa5.93□□□□□ -1.46
NIPBL-201ENST00000282516 CDSNQ15517 529 aa5.92□□□□□ -1.46
NIPBL-201ENST00000282516 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
NIPBL-201ENST00000282516 ITPR3Q14573 2671 aa5.91□□□□□ -1.46
NIPBL-201ENST00000282516 KRTAP10-9P60411 292 aa5.91□□□□□ -1.46
NIPBL-201ENST00000282516 OBSCN-AS1Q96MR7 158 aa5.91□□□□□ -1.46
NIPBL-201ENST00000282516 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
NIPBL-201ENST00000282516 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
NIPBL-201ENST00000282516 PRO3102Q9H379 93 aa5.9□□□□□ -1.46
NIPBL-201ENST00000282516 KLKP1Q107X0 134 aa5.9□□□□□ -1.46
NIPBL-201ENST00000282516 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.46
NIPBL-201ENST00000282516 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.47
NIPBL-201ENST00000282516 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
NIPBL-201ENST00000282516 DNAH10OSP0CZ25 163 aa5.89□□□□□ -1.47
NIPBL-201ENST00000282516 COL4A2P08572 1712 aa5.88□□□□□ -1.47
NIPBL-201ENST00000282516 Q1T7F1 81 aa5.88□□□□□ -1.47
NIPBL-201ENST00000282516 DSCR10P59022 87 aa5.88□□□□□ -1.47
NIPBL-201ENST00000282516 A0A0D9SG42 100 aa5.88□□□□□ -1.47
NIPBL-201ENST00000282516 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
NIPBL-201ENST00000282516 FAM168BA1KXE4 195 aa5.87□□□□□ -1.47
NIPBL-201ENST00000282516 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
NIPBL-201ENST00000282516 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
NIPBL-201ENST00000282516 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
NIPBL-201ENST00000282516 CSNK1G2-AS1Q8NCQ2 148 aa5.86□□□□□ -1.47
NIPBL-201ENST00000282516 FAM104AQ969W3 186 aa5.85□□□□□ -1.47
NIPBL-201ENST00000282516 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
NIPBL-201ENST00000282516 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
NIPBL-201ENST00000282516 IGLV5-48A0A075B6I7 105 aa5.84□□□□□ -1.47
NIPBL-201ENST00000282516 Q8NAQ8 132 aa5.83□□□□□ -1.48
NIPBL-201ENST00000282516 HELZ2Q9BYK8 2649 aaKnown RBP5.83□□□□□ -1.48
NIPBL-201ENST00000282516 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
NIPBL-201ENST00000282516 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
NIPBL-201ENST00000282516 LINC00528Q8N1L1 170 aa5.81□□□□□ -1.48
NIPBL-201ENST00000282516 LINC00336Q6ZUF6 198 aa5.81□□□□□ -1.48
NIPBL-201ENST00000282516 WWC2-AS2Q96NR7 200 aa5.81□□□□□ -1.48
NIPBL-201ENST00000282516 LITAFQ99732 161 aa5.81□□□□□ -1.48
NIPBL-201ENST00000282516 A0A1W2PPR1 153 aa5.81□□□□□ -1.48
NIPBL-201ENST00000282516 ZNF861PO60384 105 aa5.8□□□□□ -1.48
NIPBL-201ENST00000282516 H7BZZ5 65 aa5.8□□□□□ -1.48
NIPBL-201ENST00000282516 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
NIPBL-201ENST00000282516 C15orf56Q8N910 161 aa5.78□□□□□ -1.48
NIPBL-201ENST00000282516 Q8N1X5 172 aa5.76□□□□□ -1.49
NIPBL-201ENST00000282516 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
NIPBL-201ENST00000282516 UNC79Q9P2D8 2635 aa5.75□□□□□ -1.49
NIPBL-201ENST00000282516 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
NIPBL-201ENST00000282516 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
NIPBL-201ENST00000282516 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
NIPBL-201ENST00000282516 TEP1Q99973 2627 aaKnown RBP5.73□□□□□ -1.49
NIPBL-201ENST00000282516 GCN1Q92616 2671 aaKnown RBP5.72□□□□□ -1.49
NIPBL-201ENST00000282516 CHD6Q8TD26 2715 aa5.71□□□□□ -1.49
NIPBL-201ENST00000282516 A0A1B0GU33 70 aa5.71□□□□□ -1.49
NIPBL-201ENST00000282516 TLX1NBP0CAT3 122 aa5.71□□□□□ -1.49
NIPBL-201ENST00000282516 Q8N377 158 aa5.71□□□□□ -1.5
NIPBL-201ENST00000282516 DMAC1Q96GE9 116 aa5.71□□□□□ -1.5
NIPBL-201ENST00000282516 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
NIPBL-201ENST00000282516 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
NIPBL-201ENST00000282516 TEX15Q9BXT5 2789 aa5.7□□□□□ -1.5
NIPBL-201ENST00000282516 PRR34Q9NV39 138 aa5.69□□□□□ -1.5
NIPBL-201ENST00000282516 HRES1P13985 223 aa5.69□□□□□ -1.5
NIPBL-201ENST00000282516 Q75L30 129 aa5.69□□□□□ -1.5
NIPBL-201ENST00000282516 KRTAP24-1Q3LI83 254 aa5.69□□□□□ -1.5
NIPBL-201ENST00000282516 H3BS24 57 aa5.68□□□□□ -1.5
NIPBL-201ENST00000282516 SETXQ7Z333 2677 aaKnown RBP5.68□□□□□ -1.5
NIPBL-201ENST00000282516 A0A087WTM6 91 aa5.67□□□□□ -1.5
NIPBL-201ENST00000282516 Q6ZSA8 131 aa5.67□□□□□ -1.5
NIPBL-201ENST00000282516 C9orf163Q8N9P6 203 aa5.67□□□□□ -1.5
NIPBL-201ENST00000282516 CNBPP62633 177 aaKnown RBP5.65□□□□□ -1.5
NIPBL-201ENST00000282516 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.5
NIPBL-201ENST00000282516 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.51
NIPBL-201ENST00000282516 A0A0G2JQZ4 141 aa5.64□□□□□ -1.51
NIPBL-201ENST00000282516 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
NIPBL-201ENST00000282516 M0R2T5 61 aa5.64□□□□□ -1.51
NIPBL-201ENST00000282516 C10orf142B7Z368 130 aa5.64□□□□□ -1.51
NIPBL-201ENST00000282516 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
NIPBL-201ENST00000282516 KLK9Q2XQG4 91 aa5.63□□□□□ -1.51
NIPBL-201ENST00000282516 SMR3BP02814 79 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-201ENST00000282516 WIPF1O43516 503 aa5.61□□□□□ -1.51
NIPBL-201ENST00000282516 OCR1Q9BZK8 76 aa5.61□□□□□ -1.51
NIPBL-201ENST00000282516 S4R3F8 94 aa5.61□□□□□ -1.51
NIPBL-201ENST00000282516 A0A1W2PNM2 257 aa5.6□□□□□ -1.51
NIPBL-201ENST00000282516 K7EIL1 84 aa5.6□□□□□ -1.51
NIPBL-201ENST00000282516 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
NIPBL-201ENST00000282516 SPINK7P58062 85 aa5.59□□□□□ -1.52
NIPBL-201ENST00000282516 KRTAP10-11P60412 298 aa5.59□□□□□ -1.52
NIPBL-201ENST00000282516 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
NIPBL-201ENST00000282516 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
NIPBL-201ENST00000282516 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-201ENST00000282516 C19orf73Q9NVV2 129 aa5.56□□□□□ -1.52
NIPBL-201ENST00000282516 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
NIPBL-201ENST00000282516 GIG44P09565 113 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-201ENST00000282516 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
NIPBL-201ENST00000282516 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
NIPBL-201ENST00000282516 CENPFP49454 3210 aa5.52□□□□□ -1.53
NIPBL-201ENST00000282516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-201ENST00000282516 R4GN34 69 aa5.52□□□□□ -1.53
NIPBL-201ENST00000282516 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
NIPBL-201ENST00000282516 NSD1Q96L73 2696 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms