RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PRO0628Q9UI54 55 aa12.27□□□□□ -0.44
SSC4D-201ENST00000275560 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.45
SSC4D-201ENST00000275560 NDUFC1O43677 76 aa12.26□□□□□ -0.45
SSC4D-201ENST00000275560 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
SSC4D-201ENST00000275560 OCR1Q9BZK8 76 aa12.26□□□□□ -0.45
SSC4D-201ENST00000275560 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
SSC4D-201ENST00000275560 C1orf43Q9BWL3 253 aa12.25□□□□□ -0.45
SSC4D-201ENST00000275560 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
SSC4D-201ENST00000275560 PRYO14603 147 aa12.24□□□□□ -0.45
SSC4D-201ENST00000275560 EGFEM1PQ0D2K5 195 aa12.24□□□□□ -0.45
SSC4D-201ENST00000275560 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
SSC4D-201ENST00000275560 F8P00451 2351 aa12.23□□□□□ -0.45
SSC4D-201ENST00000275560 FAM30AQ9NZY2 134 aa12.23□□□□□ -0.45
SSC4D-201ENST00000275560 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
SSC4D-201ENST00000275560 Q8N377 158 aa12.22□□□□□ -0.45
SSC4D-201ENST00000275560 TENM3Q9P273 2699 aa12.22□□□□□ -0.45
SSC4D-201ENST00000275560 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.46
SSC4D-201ENST00000275560 BRK1Q8WUW1 75 aa12.21□□□□□ -0.46
SSC4D-201ENST00000275560 ANK2Q01484 3957 aa12.2□□□□□ -0.46
SSC4D-201ENST00000275560 SMIM29Q86T20 159 aa12.2□□□□□ -0.46
SSC4D-201ENST00000275560 RETNQ9HD89 108 aa12.2□□□□□ -0.46
SSC4D-201ENST00000275560 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
SSC4D-201ENST00000275560 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
SSC4D-201ENST00000275560 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSC4D-201ENST00000275560 KPRPQ5T749 579 aaPredicted RBP12.18□□□□□ -0.46
SSC4D-201ENST00000275560 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
SSC4D-201ENST00000275560 ATP5EP56381 51 aaPredicted RBP12.16□□□□□ -0.46
SSC4D-201ENST00000275560 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
SSC4D-201ENST00000275560 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
SSC4D-201ENST00000275560 Q6ZTC4 211 aa12.16□□□□□ -0.46
SSC4D-201ENST00000275560 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
SSC4D-201ENST00000275560 ST20-AS1Q8NBB2 130 aa12.15□□□□□ -0.46
SSC4D-201ENST00000275560 NKAPP1Q8N9T2 125 aa12.15□□□□□ -0.47
SSC4D-201ENST00000275560 HECTD1Q9ULT8 2610 aa12.14□□□□□ -0.47
SSC4D-201ENST00000275560 A0A1W2PNM2 257 aa12.14□□□□□ -0.47
SSC4D-201ENST00000275560 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
SSC4D-201ENST00000275560 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
SSC4D-201ENST00000275560 ESRGQ1W209 222 aa12.12□□□□□ -0.47
SSC4D-201ENST00000275560 Q9BRP9 147 aa12.11□□□□□ -0.47
SSC4D-201ENST00000275560 SYCNQ0VAF6 134 aa12.1□□□□□ -0.47
SSC4D-201ENST00000275560 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
SSC4D-201ENST00000275560 A0A0G2JQZ4 141 aa12.1□□□□□ -0.47
SSC4D-201ENST00000275560 A0A1W2PNN7 141 aa12.1□□□□□ -0.47
SSC4D-201ENST00000275560 IGLV5-48A0A075B6I7 105 aa12.1□□□□□ -0.47
SSC4D-201ENST00000275560 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
SSC4D-201ENST00000275560 PRR4Q16378 134 aa12.06□□□□□ -0.48
SSC4D-201ENST00000275560 K7EQZ3 153 aa12.05□□□□□ -0.48
SSC4D-201ENST00000275560 PRB2P02812 416 aaPredicted RBP12.04□□□□□ -0.48
SSC4D-201ENST00000275560 Q6ZRX8 168 aa12.04□□□□□ -0.48
SSC4D-201ENST00000275560 FLNBO75369 2602 aaKnown RBP12.04□□□□□ -0.48
SSC4D-201ENST00000275560 DSCR10P59022 87 aa12.03□□□□□ -0.48
SSC4D-201ENST00000275560 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
SSC4D-201ENST00000275560 DEFB116Q30KQ4 102 aa12.02□□□□□ -0.48
SSC4D-201ENST00000275560 CASC10Q5T4H9 136 aa12.02□□□□□ -0.49
SSC4D-201ENST00000275560 ETDCA0A1B0GVM5 59 aa12.01□□□□□ -0.49
SSC4D-201ENST00000275560 TNP2Q05952 138 aa12.01□□□□□ -0.49
SSC4D-201ENST00000275560 KRTAP7-1Q8IUC3 87 aa12□□□□□ -0.49
SSC4D-201ENST00000275560 Q8NBF4 154 aa12□□□□□ -0.49
SSC4D-201ENST00000275560 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
SSC4D-201ENST00000275560 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
SSC4D-201ENST00000275560 C1orf64Q8NEQ6 169 aa11.99□□□□□ -0.49
SSC4D-201ENST00000275560 hDV103S1A0JD37 113 aa11.98□□□□□ -0.49
SSC4D-201ENST00000275560 OXLD1Q5BKU9 147 aa11.98□□□□□ -0.49
SSC4D-201ENST00000275560 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
SSC4D-201ENST00000275560 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
SSC4D-201ENST00000275560 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.96□□□□□ -0.49
SSC4D-201ENST00000275560 UBE2BP63146 152 aa11.96□□□□□ -0.5
SSC4D-201ENST00000275560 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
SSC4D-201ENST00000275560 MAST4O15021 2626 aa11.94□□□□□ -0.5
SSC4D-201ENST00000275560 LCE6AA0A183 80 aa11.94□□□□□ -0.5
SSC4D-201ENST00000275560 CSMD3Q7Z407 3707 aa11.93□□□□□ -0.5
SSC4D-201ENST00000275560 ZCCHC13Q8WW36 166 aaKnown RBP11.93□□□□□ -0.5
SSC4D-201ENST00000275560 FBN1P35555 2871 aaKnown RBP11.93□□□□□ -0.5
SSC4D-201ENST00000275560 H3BNG1 76 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 C1orf195Q5TG92 126 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 NOTCH1P46531 2555 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 PSPHP1O15172 72 aa11.92□□□□□ -0.5
SSC4D-201ENST00000275560 WFDC13Q8IUB5 93 aa11.91□□□□□ -0.5
SSC4D-201ENST00000275560 SPRR1AP35321 89 aa11.91□□□□□ -0.5
SSC4D-201ENST00000275560 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
SSC4D-201ENST00000275560 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
SSC4D-201ENST00000275560 PSCAO43653 123 aa11.89□□□□□ -0.51
SSC4D-201ENST00000275560 DNAH10Q8IVF4 4471 aa11.89□□□□□ -0.51
SSC4D-201ENST00000275560 HCG22E2RYF7 251 aa11.88□□□□□ -0.51
SSC4D-201ENST00000275560 LYSTQ99698 3801 aa11.88□□□□□ -0.51
SSC4D-201ENST00000275560 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
SSC4D-201ENST00000275560 DNAH1Q9P2D7 4330 aa11.87□□□□□ -0.51
SSC4D-201ENST00000275560 RPL37AP61513 92 aaKnown RBP11.87□□□□□ -0.51
SSC4D-201ENST00000275560 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
SSC4D-201ENST00000275560 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
SSC4D-201ENST00000275560 PLA2G2DQ9UNK4 145 aa11.84□□□□□ -0.51
SSC4D-201ENST00000275560 A0A1B0GW54 56 aa11.84□□□□□ -0.51
SSC4D-201ENST00000275560 IGFL1Q6UW32 110 aa11.84□□□□□ -0.51
SSC4D-201ENST00000275560 PRLHP81277 87 aa11.83□□□□□ -0.52
SSC4D-201ENST00000275560 F8WDY8 70 aa11.83□□□□□ -0.52
SSC4D-201ENST00000275560 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
SSC4D-201ENST00000275560 A0A087WSZ3 146 aa11.82□□□□□ -0.52
SSC4D-201ENST00000275560 CMYA5Q8N3K9 4069 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms