RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LRCOL1A6NCL2 159 aa8.56□□□□□ -1.04
COL8A1-202ENST00000273342 BRK1Q8WUW1 75 aa8.56□□□□□ -1.04
COL8A1-202ENST00000273342 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
COL8A1-202ENST00000273342 VPREB1P12018 145 aa8.56□□□□□ -1.04
COL8A1-202ENST00000273342 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
COL8A1-202ENST00000273342 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
COL8A1-202ENST00000273342 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
COL8A1-202ENST00000273342 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
COL8A1-202ENST00000273342 SPART-AS1P0CW21 52 aa8.54□□□□□ -1.04
COL8A1-202ENST00000273342 BCE1O60756 84 aa8.53□□□□□ -1.04
COL8A1-202ENST00000273342 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
COL8A1-202ENST00000273342 IGKV4-1P06312 121 aa8.53□□□□□ -1.04
COL8A1-202ENST00000273342 Q8NAQ8 132 aa8.53□□□□□ -1.04
COL8A1-202ENST00000273342 J3QKU1 62 aa8.53□□□□□ -1.04
COL8A1-202ENST00000273342 RETNQ9HD89 108 aa8.52□□□□□ -1.05
COL8A1-202ENST00000273342 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
COL8A1-202ENST00000273342 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
COL8A1-202ENST00000273342 RPL37AP8A6NKH3 93 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 M0R378 163 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 Q6ZRP5 223 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 MRAPQ8TCY5 172 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
COL8A1-202ENST00000273342 APOC4P55056 127 aa8.5□□□□□ -1.05
COL8A1-202ENST00000273342 IGKV2D-24A0A075B6R9 120 aa8.49□□□□□ -1.05
COL8A1-202ENST00000273342 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
COL8A1-202ENST00000273342 PRYO14603 147 aa8.49□□□□□ -1.05
COL8A1-202ENST00000273342 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
COL8A1-202ENST00000273342 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL8A1-202ENST00000273342 PRR4Q16378 134 aa8.48□□□□□ -1.05
COL8A1-202ENST00000273342 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
COL8A1-202ENST00000273342 NDUFC1O43677 76 aa8.48□□□□□ -1.05
COL8A1-202ENST00000273342 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
COL8A1-202ENST00000273342 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
COL8A1-202ENST00000273342 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
COL8A1-202ENST00000273342 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
COL8A1-202ENST00000273342 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
COL8A1-202ENST00000273342 NKAPP1Q8N9T2 125 aa8.47□□□□□ -1.05
COL8A1-202ENST00000273342 H3BQ85 93 aa8.46□□□□□ -1.05
COL8A1-202ENST00000273342 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.05
COL8A1-202ENST00000273342 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.05
COL8A1-202ENST00000273342 Q8N377 158 aa8.46□□□□□ -1.05
COL8A1-202ENST00000273342 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
COL8A1-202ENST00000273342 FAM168BA1KXE4 195 aa8.45□□□□□ -1.06
COL8A1-202ENST00000273342 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
COL8A1-202ENST00000273342 Q6ZTC4 211 aa8.43□□□□□ -1.06
COL8A1-202ENST00000273342 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
COL8A1-202ENST00000273342 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
COL8A1-202ENST00000273342 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
COL8A1-202ENST00000273342 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
COL8A1-202ENST00000273342 ESRGQ1W209 222 aa8.41□□□□□ -1.06
COL8A1-202ENST00000273342 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
COL8A1-202ENST00000273342 C1orf137Q5JT78 98 aa8.4□□□□□ -1.07
COL8A1-202ENST00000273342 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
COL8A1-202ENST00000273342 ATP5EP56381 51 aaPredicted RBP8.39□□□□□ -1.07
COL8A1-202ENST00000273342 Q9BRP9 147 aa8.38□□□□□ -1.07
COL8A1-202ENST00000273342 CSMD3Q7Z407 3707 aa8.38□□□□□ -1.07
COL8A1-202ENST00000273342 K7EQZ3 153 aa8.38□□□□□ -1.07
COL8A1-202ENST00000273342 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
COL8A1-202ENST00000273342 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
COL8A1-202ENST00000273342 UBE2BP63146 152 aa8.36□□□□□ -1.07
COL8A1-202ENST00000273342 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
COL8A1-202ENST00000273342 PSPHP1O15172 72 aa8.35□□□□□ -1.07
COL8A1-202ENST00000273342 CASC10Q5T4H9 136 aa8.35□□□□□ -1.07
COL8A1-202ENST00000273342 KMT2BQ9UMN6 2715 aaPredicted RBP8.35□□□□□ -1.07
COL8A1-202ENST00000273342 IGLV5-48A0A075B6I7 105 aa8.34□□□□□ -1.07
COL8A1-202ENST00000273342 Q6ZRX8 168 aa8.34□□□□□ -1.07
COL8A1-202ENST00000273342 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
COL8A1-202ENST00000273342 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
COL8A1-202ENST00000273342 DSCR10P59022 87 aa8.33□□□□□ -1.08
COL8A1-202ENST00000273342 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
COL8A1-202ENST00000273342 Q8NBF4 154 aa8.31□□□□□ -1.08
COL8A1-202ENST00000273342 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
COL8A1-202ENST00000273342 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
COL8A1-202ENST00000273342 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
COL8A1-202ENST00000273342 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
COL8A1-202ENST00000273342 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
COL8A1-202ENST00000273342 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
COL8A1-202ENST00000273342 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
COL8A1-202ENST00000273342 ANK2Q01484 3957 aa8.27□□□□□ -1.08
COL8A1-202ENST00000273342 KRTAP10-11P60412 298 aa8.27□□□□□ -1.09
COL8A1-202ENST00000273342 PSCAO43653 123 aa8.27□□□□□ -1.09
COL8A1-202ENST00000273342 PRLHP81277 87 aa8.26□□□□□ -1.09
COL8A1-202ENST00000273342 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
COL8A1-202ENST00000273342 TENM2Q9NT68 2774 aa8.25□□□□□ -1.09
COL8A1-202ENST00000273342 IGKV2-24A0A0C4DH68 120 aa8.25□□□□□ -1.09
COL8A1-202ENST00000273342 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
COL8A1-202ENST00000273342 TNP2Q05952 138 aa8.25□□□□□ -1.09
COL8A1-202ENST00000273342 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
COL8A1-202ENST00000273342 A0A087WSZ3 146 aa8.24□□□□□ -1.09
COL8A1-202ENST00000273342 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
COL8A1-202ENST00000273342 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
COL8A1-202ENST00000273342 A0A096LNI7 61 aa8.23□□□□□ -1.09
COL8A1-202ENST00000273342 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
COL8A1-202ENST00000273342 C11orf45Q8TAV5 145 aa8.23□□□□□ -1.09
COL8A1-202ENST00000273342 A8MU10 97 aa8.22□□□□□ -1.09
COL8A1-202ENST00000273342 COL7A1Q02388 2944 aa8.22□□□□□ -1.09
COL8A1-202ENST00000273342 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.09
COL8A1-202ENST00000273342 IGFL1Q6UW32 110 aa8.21□□□□□ -1.1
COL8A1-202ENST00000273342 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms