RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 Q8NAQ8 132 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 NREPQ16612 68 aa10.74□□□□□ -0.69
MAP1LC3B-201ENST00000268607 MEGF8Q7Z7M0 2845 aa10.74□□□□□ -0.69
MAP1LC3B-201ENST00000268607 COX17Q14061 63 aa10.74□□□□□ -0.69
MAP1LC3B-201ENST00000268607 Q6ZQY7 126 aa10.73□□□□□ -0.69
MAP1LC3B-201ENST00000268607 A0A1B0GUV1 79 aa10.72□□□□□ -0.69
MAP1LC3B-201ENST00000268607 BPY2O14599 106 aa10.71□□□□□ -0.7
MAP1LC3B-201ENST00000268607 ANGP03950 147 aaKnown RBP10.7□□□□□ -0.7
MAP1LC3B-201ENST00000268607 K7EIL1 84 aa10.7□□□□□ -0.7
MAP1LC3B-201ENST00000268607 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
MAP1LC3B-201ENST00000268607 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
MAP1LC3B-201ENST00000268607 SPART-AS1P0CW21 52 aa10.69□□□□□ -0.7
MAP1LC3B-201ENST00000268607 MUC7Q8TAX7 377 aa10.69□□□□□ -0.7
MAP1LC3B-201ENST00000268607 TGP01266 2768 aa10.68□□□□□ -0.7
MAP1LC3B-201ENST00000268607 ESRGQ1W209 222 aa10.68□□□□□ -0.7
MAP1LC3B-201ENST00000268607 C10orf25Q5T742 122 aa10.68□□□□□ -0.7
MAP1LC3B-201ENST00000268607 LYSTQ99698 3801 aa10.67□□□□□ -0.7
MAP1LC3B-201ENST00000268607 Q8N9L7 120 aa10.67□□□□□ -0.7
MAP1LC3B-201ENST00000268607 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
MAP1LC3B-201ENST00000268607 CSMD3Q7Z407 3707 aa10.66□□□□□ -0.7
MAP1LC3B-201ENST00000268607 UNQ6190/PRO20217Q6UXQ8 127 aa10.66□□□□□ -0.7
MAP1LC3B-201ENST00000268607 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
MAP1LC3B-201ENST00000268607 PDE6GP18545 87 aa10.65□□□□□ -0.7
MAP1LC3B-201ENST00000268607 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.7
MAP1LC3B-201ENST00000268607 REG3AQ06141 175 aa10.65□□□□□ -0.7
MAP1LC3B-201ENST00000268607 PRKDCP78527 4128 aaKnown RBP10.64□□□□□ -0.71
MAP1LC3B-201ENST00000268607 PRYO14603 147 aa10.64□□□□□ -0.71
MAP1LC3B-201ENST00000268607 IGLV6-57P01721 117 aa10.64□□□□□ -0.71
MAP1LC3B-201ENST00000268607 Q6ZTC4 211 aa10.63□□□□□ -0.71
MAP1LC3B-201ENST00000268607 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
MAP1LC3B-201ENST00000268607 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
MAP1LC3B-201ENST00000268607 ERC2-IT1O76042 136 aa10.61□□□□□ -0.71
MAP1LC3B-201ENST00000268607 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
MAP1LC3B-201ENST00000268607 PMAIP1Q13794 54 aa10.61□□□□□ -0.71
MAP1LC3B-201ENST00000268607 SPAG11BQ08648 103 aa10.6□□□□□ -0.71
MAP1LC3B-201ENST00000268607 OCR1Q9BZK8 76 aa10.59□□□□□ -0.71
MAP1LC3B-201ENST00000268607 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
MAP1LC3B-201ENST00000268607 XAGE1AQ9HD64 81 aa10.58□□□□□ -0.72
MAP1LC3B-201ENST00000268607 LELP1Q5T871 98 aa10.57□□□□□ -0.72
MAP1LC3B-201ENST00000268607 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
MAP1LC3B-201ENST00000268607 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
MAP1LC3B-201ENST00000268607 H3BQ85 93 aa10.56□□□□□ -0.72
MAP1LC3B-201ENST00000268607 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.56□□□□□ -0.72
MAP1LC3B-201ENST00000268607 ZNF73O43830 326 aaPredicted RBP10.55□□□□□ -0.72
MAP1LC3B-201ENST00000268607 IGKV4-1P06312 121 aa10.55□□□□□ -0.72
MAP1LC3B-201ENST00000268607 COX7BP24311 80 aa10.54□□□□□ -0.72
MAP1LC3B-201ENST00000268607 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
MAP1LC3B-201ENST00000268607 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
MAP1LC3B-201ENST00000268607 Q6ZRP5 223 aa10.53□□□□□ -0.72
MAP1LC3B-201ENST00000268607 Q6ZRU5 148 aa10.52□□□□□ -0.73
MAP1LC3B-201ENST00000268607 hDV103S1A0JD37 113 aa10.51□□□□□ -0.73
MAP1LC3B-201ENST00000268607 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
MAP1LC3B-201ENST00000268607 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
MAP1LC3B-201ENST00000268607 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
MAP1LC3B-201ENST00000268607 PSPHP1O15172 72 aa10.51□□□□□ -0.73
MAP1LC3B-201ENST00000268607 C6orf48Q9UBA6 75 aa10.5□□□□□ -0.73
MAP1LC3B-201ENST00000268607 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
MAP1LC3B-201ENST00000268607 C1orf64Q8NEQ6 169 aa10.48□□□□□ -0.73
MAP1LC3B-201ENST00000268607 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
MAP1LC3B-201ENST00000268607 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
MAP1LC3B-201ENST00000268607 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
MAP1LC3B-201ENST00000268607 DNAH7Q8WXX0 4024 aa10.47□□□□□ -0.73
MAP1LC3B-201ENST00000268607 Q1T7F1 81 aa10.47□□□□□ -0.73
MAP1LC3B-201ENST00000268607 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
MAP1LC3B-201ENST00000268607 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
MAP1LC3B-201ENST00000268607 SMIM29Q86T20 159 aa10.43□□□□□ -0.74
MAP1LC3B-201ENST00000268607 VPREB1P12018 145 aa10.43□□□□□ -0.74
MAP1LC3B-201ENST00000268607 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
MAP1LC3B-201ENST00000268607 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
MAP1LC3B-201ENST00000268607 A8MU10 97 aa10.41□□□□□ -0.74
MAP1LC3B-201ENST00000268607 PRR4Q16378 134 aa10.41□□□□□ -0.74
MAP1LC3B-201ENST00000268607 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
MAP1LC3B-201ENST00000268607 H3BNG1 76 aa10.38□□□□□ -0.75
MAP1LC3B-201ENST00000268607 M0R378 163 aa10.38□□□□□ -0.75
MAP1LC3B-201ENST00000268607 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
MAP1LC3B-201ENST00000268607 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
MAP1LC3B-201ENST00000268607 IGKV2D-24A0A075B6R9 120 aa10.36□□□□□ -0.75
MAP1LC3B-201ENST00000268607 PLECQ15149 4684 aaKnown RBP10.36□□□□□ -0.75
MAP1LC3B-201ENST00000268607 A8MUN3 132 aa10.36□□□□□ -0.75
MAP1LC3B-201ENST00000268607 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
MAP1LC3B-201ENST00000268607 CD164Q04900 197 aa10.35□□□□□ -0.75
MAP1LC3B-201ENST00000268607 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
MAP1LC3B-201ENST00000268607 LCE6AA0A183 80 aa10.34□□□□□ -0.75
MAP1LC3B-201ENST00000268607 C15orf56Q8N910 161 aa10.33□□□□□ -0.76
MAP1LC3B-201ENST00000268607 ZCCHC13Q8WW36 166 aaKnown RBP10.32□□□□□ -0.76
MAP1LC3B-201ENST00000268607 Q8N377 158 aa10.32□□□□□ -0.76
MAP1LC3B-201ENST00000268607 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
MAP1LC3B-201ENST00000268607 SYCNQ0VAF6 134 aa10.31□□□□□ -0.76
MAP1LC3B-201ENST00000268607 PSCAO43653 123 aa10.3□□□□□ -0.76
MAP1LC3B-201ENST00000268607 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.3□□□□□ -0.76
MAP1LC3B-201ENST00000268607 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
MAP1LC3B-201ENST00000268607 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
MAP1LC3B-201ENST00000268607 ST20-AS1Q8NBB2 130 aa10.28□□□□□ -0.76
MAP1LC3B-201ENST00000268607 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
MAP1LC3B-201ENST00000268607 A0A1W2PNM2 257 aa10.27□□□□□ -0.77
MAP1LC3B-201ENST00000268607 ETDCA0A1B0GVM5 59 aa10.26□□□□□ -0.77
MAP1LC3B-201ENST00000268607 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
MAP1LC3B-201ENST00000268607 Q5VV11 94 aa10.25□□□□□ -0.77
MAP1LC3B-201ENST00000268607 CYP4F30PQ9H0H9 118 aa10.25□□□□□ -0.77
MAP1LC3B-201ENST00000268607 DNAH1Q9P2D7 4330 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms