RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 LINC00474Q9P2X8 69 aa7.18□□□□□ -1.26
CHRNA1-201ENST00000261007 F8P00451 2351 aa7.18□□□□□ -1.26
CHRNA1-201ENST00000261007 SCXQ7RTU7 201 aa7.17□□□□□ -1.26
CHRNA1-201ENST00000261007 C11orf45Q8TAV5 145 aa7.17□□□□□ -1.26
CHRNA1-201ENST00000261007 PRYO14603 147 aa7.17□□□□□ -1.26
CHRNA1-201ENST00000261007 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
CHRNA1-201ENST00000261007 NIPBLQ6KC79 2804 aaeCLIP7.16□□□□□ -1.26
CHRNA1-201ENST00000261007 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
CHRNA1-201ENST00000261007 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
CHRNA1-201ENST00000261007 F8WDY8 70 aa7.15□□□□□ -1.26
CHRNA1-201ENST00000261007 ATRQ13535 2644 aa7.15□□□□□ -1.26
CHRNA1-201ENST00000261007 LINC01556Q5JQF7 62 aa7.15□□□□□ -1.27
CHRNA1-201ENST00000261007 WFDC10BQ8IUB3 73 aa7.14□□□□□ -1.27
CHRNA1-201ENST00000261007 M0R378 163 aa7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 ESRGQ1W209 222 aa7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 A0A1B0GW54 56 aa7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 LINC00528Q8N1L1 170 aa7.13□□□□□ -1.27
CHRNA1-201ENST00000261007 VPREB1P12018 145 aa7.12□□□□□ -1.27
CHRNA1-201ENST00000261007 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
CHRNA1-201ENST00000261007 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
CHRNA1-201ENST00000261007 VWFP04275 2813 aa7.11□□□□□ -1.27
CHRNA1-201ENST00000261007 FAM229BQ4G0N7 80 aa7.11□□□□□ -1.27
CHRNA1-201ENST00000261007 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
CHRNA1-201ENST00000261007 TENM1Q9UKZ4 2725 aa7.1□□□□□ -1.27
CHRNA1-201ENST00000261007 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
CHRNA1-201ENST00000261007 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
CHRNA1-201ENST00000261007 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
CHRNA1-201ENST00000261007 CAMK2N2Q96S95 79 aa7.09□□□□□ -1.27
CHRNA1-201ENST00000261007 LCE6AA0A183 80 aa7.09□□□□□ -1.27
CHRNA1-201ENST00000261007 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
CHRNA1-201ENST00000261007 Q8N9L7 120 aa7.08□□□□□ -1.28
CHRNA1-201ENST00000261007 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
CHRNA1-201ENST00000261007 HIGD2AQ9BW72 106 aa7.07□□□□□ -1.28
CHRNA1-201ENST00000261007 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
CHRNA1-201ENST00000261007 NBEAL2Q6ZNJ1 2754 aa7.06□□□□□ -1.28
CHRNA1-201ENST00000261007 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
CHRNA1-201ENST00000261007 IGKV2D-24A0A075B6R9 120 aa7.05□□□□□ -1.28
CHRNA1-201ENST00000261007 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
CHRNA1-201ENST00000261007 K7EIL1 84 aa7.05□□□□□ -1.28
CHRNA1-201ENST00000261007 V9GYY9 64 aa7.04□□□□□ -1.28
CHRNA1-201ENST00000261007 Q1T7F1 81 aa7.04□□□□□ -1.28
CHRNA1-201ENST00000261007 Q6ZRU5 148 aa7.03□□□□□ -1.28
CHRNA1-201ENST00000261007 C3orf84H3BNL1 204 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 Q8N377 158 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 LINC00588Q9Y4M8 146 aa7.02□□□□□ -1.29
CHRNA1-201ENST00000261007 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
CHRNA1-201ENST00000261007 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
CHRNA1-201ENST00000261007 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
CHRNA1-201ENST00000261007 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
CHRNA1-201ENST00000261007 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
CHRNA1-201ENST00000261007 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
CHRNA1-201ENST00000261007 PRB2P02812 416 aaPredicted RBP6.99□□□□□ -1.29
CHRNA1-201ENST00000261007 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
CHRNA1-201ENST00000261007 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
CHRNA1-201ENST00000261007 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
CHRNA1-201ENST00000261007 TRRAPQ9Y4A5 3859 aa6.98□□□□□ -1.29
CHRNA1-201ENST00000261007 TNP2Q05952 138 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 Q8NBF4 154 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 SEC61GP60059 68 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 Q6ZRP5 223 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 DEFB105AQ8NG35 78 aa6.97□□□□□ -1.29
CHRNA1-201ENST00000261007 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
CHRNA1-201ENST00000261007 C1orf137Q5JT78 98 aa6.95□□□□□ -1.3
CHRNA1-201ENST00000261007 FLNBO75369 2602 aaKnown RBP6.95□□□□□ -1.3
CHRNA1-201ENST00000261007 NDUFB1O75438 58 aa6.95□□□□□ -1.3
CHRNA1-201ENST00000261007 DSCR10P59022 87 aa6.95□□□□□ -1.3
CHRNA1-201ENST00000261007 C7orf33Q8WU49 177 aa6.95□□□□□ -1.3
CHRNA1-201ENST00000261007 Q6ZRX8 168 aa6.94□□□□□ -1.3
CHRNA1-201ENST00000261007 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.93□□□□□ -1.3
CHRNA1-201ENST00000261007 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
CHRNA1-201ENST00000261007 IGLV5-37A0A075B6J1 123 aa6.93□□□□□ -1.3
CHRNA1-201ENST00000261007 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
CHRNA1-201ENST00000261007 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
CHRNA1-201ENST00000261007 STAB1Q9NY15 2570 aa6.92□□□□□ -1.3
CHRNA1-201ENST00000261007 SPRR1AP35321 89 aa6.92□□□□□ -1.3
CHRNA1-201ENST00000261007 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
CHRNA1-201ENST00000261007 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
CHRNA1-201ENST00000261007 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
CHRNA1-201ENST00000261007 Q9BRP9 147 aa6.91□□□□□ -1.3
CHRNA1-201ENST00000261007 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.3
CHRNA1-201ENST00000261007 K7EQZ3 153 aa6.9□□□□□ -1.3
CHRNA1-201ENST00000261007 MAST4O15021 2626 aa6.9□□□□□ -1.31
CHRNA1-201ENST00000261007 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 DNAH3Q8TD57 4116 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 PSCAO43653 123 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 BAHCC1Q9P281 2608 aa6.89□□□□□ -1.31
CHRNA1-201ENST00000261007 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
CHRNA1-201ENST00000261007 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
CHRNA1-201ENST00000261007 MP68P56378 58 aa6.87□□□□□ -1.31
CHRNA1-201ENST00000261007 ST20-AS1Q8NBB2 130 aa6.87□□□□□ -1.31
CHRNA1-201ENST00000261007 TENM3Q9P273 2699 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms