RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 DNAH2Q9P225 4427 aa14.37□□□□□ -0.11
SIX3-201ENST00000260653 LINC01600Q96MT4 127 aa14.37□□□□□ -0.11
SIX3-201ENST00000260653 PLA2G2DQ9UNK4 145 aa14.36□□□□□ -0.11
SIX3-201ENST00000260653 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
SIX3-201ENST00000260653 A0A096LNI7 61 aa14.35□□□□□ -0.11
SIX3-201ENST00000260653 C3orf22Q8N5N4 141 aa14.35□□□□□ -0.11
SIX3-201ENST00000260653 DNAL4O96015 105 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 C7orf33Q8WU49 177 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 LINC00476Q8WZB0 136 aa14.34□□□□□ -0.11
SIX3-201ENST00000260653 ZNF73O43830 326 aaPredicted RBP14.33□□□□□ -0.12
SIX3-201ENST00000260653 DIRC1Q969H9 104 aa14.33□□□□□ -0.12
SIX3-201ENST00000260653 IGKV2-24A0A0C4DH68 120 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 BAALC-AS2P0C853 105 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 Q8N814 137 aa14.32□□□□□ -0.12
SIX3-201ENST00000260653 C16orf90A8MZG2 172 aa14.31□□□□□ -0.12
SIX3-201ENST00000260653 IGLV5-37A0A075B6J1 123 aa14.31□□□□□ -0.12
SIX3-201ENST00000260653 A0A087WTM6 91 aa14.3□□□□□ -0.12
SIX3-201ENST00000260653 TEX49A0A1B0GTD5 131 aa14.3□□□□□ -0.12
SIX3-201ENST00000260653 LINC00336Q6ZUF6 198 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 C9orf163Q8N9P6 203 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 DNAH6Q9C0G6 4158 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 UQCRQO14949 82 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 LINC00575Q6W349 94 aa14.29□□□□□ -0.12
SIX3-201ENST00000260653 ALMS1Q8TCU4 4167 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 FAM236DA0A1B0GTK5 79 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 FAM236CP0DP71 79 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C1orf195Q5TG92 126 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C22orf24Q9Y442 160 aa14.28□□□□□ -0.12
SIX3-201ENST00000260653 C3orf84H3BNL1 204 aa14.27□□□□□ -0.13
SIX3-201ENST00000260653 C1orf134Q5TEV5 83 aa14.27□□□□□ -0.13
SIX3-201ENST00000260653 RPL37AP8A6NKH3 93 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 DPH3Q96FX2 82 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 OXTP01178 125 aa14.26□□□□□ -0.13
SIX3-201ENST00000260653 CHTF8P0CG12 524 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 KCNQ1DNQ9H478 68 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 LINC00167Q96N53 147 aa14.25□□□□□ -0.13
SIX3-201ENST00000260653 GAGE2AQ6NT46 116 aa14.24□□□□□ -0.13
SIX3-201ENST00000260653 MRPL55Q7Z7F7 128 aaKnown RBP14.24□□□□□ -0.13
SIX3-201ENST00000260653 COX7BP24311 80 aa14.24□□□□□ -0.13
SIX3-201ENST00000260653 ELOF1P60002 83 aaKnown RBP14.24□□□□□ -0.13
SIX3-201ENST00000260653 HECTD4Q9Y4D8 3996 aa14.23□□□□□ -0.13
SIX3-201ENST00000260653 A0A1W2PNN7 141 aa14.23□□□□□ -0.13
SIX3-201ENST00000260653 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 hADV29S1A0JD25 119 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 ORMDL1Q9P0S3 153 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 TRBV7-6A0A0J9YX20 115 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 FUSP35637 526 aaKnown RBP eCLIP14.22□□□□□ -0.13
SIX3-201ENST00000260653 SDIM1Q6ZPB5 146 aa14.22□□□□□ -0.13
SIX3-201ENST00000260653 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
SIX3-201ENST00000260653 DNAH17Q9UFH2 4485 aa14.18□□□□□ -0.14
SIX3-201ENST00000260653 PRYO14603 147 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 PANO1I0J062 215 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 HYDINQ4G0P3 5121 aa14.16□□□□□ -0.14
SIX3-201ENST00000260653 Q6ZQY7 126 aa14.15□□□□□ -0.14
SIX3-201ENST00000260653 RTL8CO15255 209 aa14.14□□□□□ -0.15
SIX3-201ENST00000260653 CRYGAP11844 174 aa14.14□□□□□ -0.15
SIX3-201ENST00000260653 FRAS1Q86XX4 4008 aa14.13□□□□□ -0.15
SIX3-201ENST00000260653 KRTAP4-16G5E9R7 235 aaPredicted RBP14.13□□□□□ -0.15
SIX3-201ENST00000260653 SPRR1AP35321 89 aa14.13□□□□□ -0.15
SIX3-201ENST00000260653 TRBV7-7A0A0K0K1E9 115 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 TMEM258P61165 79 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 TNP2Q05952 138 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 FAM19A1Q7Z5A9 133 aa14.12□□□□□ -0.15
SIX3-201ENST00000260653 LINC00474Q9P2X8 69 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 DSCR8Q96T75 97 aa14.11□□□□□ -0.15
SIX3-201ENST00000260653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.1□□□□□ -0.15
SIX3-201ENST00000260653 PHF5AQ7RTV0 110 aaKnown RBP14.1□□□□□ -0.15
SIX3-201ENST00000260653 ETDCA0A1B0GVM5 59 aa14.09□□□□□ -0.15
SIX3-201ENST00000260653 Q6ZRX8 168 aa14.09□□□□□ -0.15
SIX3-201ENST00000260653 COX7CP15954 63 aa14.08□□□□□ -0.15
SIX3-201ENST00000260653 REG3GQ6UW15 175 aa14.08□□□□□ -0.16
SIX3-201ENST00000260653 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.08□□□□□ -0.16
SIX3-201ENST00000260653 SPACA4Q8TDM5 124 aa14.07□□□□□ -0.16
SIX3-201ENST00000260653 IGLV5-52A0A0A0MRZ9 124 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 OBSCN-AS1Q96MR7 158 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 Q9BRP9 147 aa14.06□□□□□ -0.16
SIX3-201ENST00000260653 KRTAP11-1Q8IUC1 163 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 INAFM2P0DMQ5 153 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 C14orf132Q9NPU4 83 aa14.05□□□□□ -0.16
SIX3-201ENST00000260653 A0A0U1RQV1 116 aa14.04□□□□□ -0.16
SIX3-201ENST00000260653 UBE2BP63146 152 aa14.03□□□□□ -0.16
SIX3-201ENST00000260653 IMUPQ9GZP8 106 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 DHRS4-AS1Q9P1J3 65 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 DNAH11Q96DT5 4516 aa14.01□□□□□ -0.17
SIX3-201ENST00000260653 SACSQ9NZJ4 4579 aa14□□□□□ -0.17
SIX3-201ENST00000260653 CYSTM1Q9H1C7 97 aa14□□□□□ -0.17
SIX3-201ENST00000260653 FAT2Q9NYQ8 4349 aa13.99□□□□□ -0.17
SIX3-201ENST00000260653 LAMTOR3Q9UHA4 124 aa13.99□□□□□ -0.17
SIX3-201ENST00000260653 JMJD7-PLA2G4BH0Y9G9 81 aa13.98□□□□□ -0.17
SIX3-201ENST00000260653 KRTAP10-2P60368 255 aa13.98□□□□□ -0.17
SIX3-201ENST00000260653 H3BQ85 93 aa13.97□□□□□ -0.17
SIX3-201ENST00000260653 DNAH5Q8TE73 4624 aa13.96□□□□□ -0.17
SIX3-201ENST00000260653 PRLHP81277 87 aa13.96□□□□□ -0.17
SIX3-201ENST00000260653 EPM2AB3EWF7 344 aa13.96□□□□□ -0.18
SIX3-201ENST00000260653 ERC2-IT1O76042 136 aa13.96□□□□□ -0.18
SIX3-201ENST00000260653 FAM240AA0A1B0GVK7 77 aa13.95□□□□□ -0.18
SIX3-201ENST00000260653 GHRHP01286 108 aa13.95□□□□□ -0.18
SIX3-201ENST00000260653 DEFB105AQ8NG35 78 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms