RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TM2D3Q9BRN9 247 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 SYCNQ0VAF6 134 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 RPL37AP8A6NKH3 93 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 PSCAO43653 123 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 Q6ZQY7 126 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 Q6ZRP5 223 aa9.67□□□□□ -0.86
TRAFD1-201ENST00000257604 H3BNG1 76 aa9.66□□□□□ -0.86
TRAFD1-201ENST00000257604 DEFB105AQ8NG35 78 aa9.66□□□□□ -0.86
TRAFD1-201ENST00000257604 HUWE1Q7Z6Z7 4374 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-201ENST00000257604 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
TRAFD1-201ENST00000257604 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-201ENST00000257604 Q8N9L7 120 aa9.65□□□□□ -0.86
TRAFD1-201ENST00000257604 V9GYY9 64 aa9.65□□□□□ -0.86
TRAFD1-201ENST00000257604 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.87
TRAFD1-201ENST00000257604 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.87
TRAFD1-201ENST00000257604 PRO0628Q9UI54 55 aa9.65□□□□□ -0.87
TRAFD1-201ENST00000257604 LINC00167Q96N53 147 aa9.64□□□□□ -0.87
TRAFD1-201ENST00000257604 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
TRAFD1-201ENST00000257604 KRTAP26-1Q6PEX3 210 aa9.63□□□□□ -0.87
TRAFD1-201ENST00000257604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-201ENST00000257604 LINC00575Q6W349 94 aa9.63□□□□□ -0.87
TRAFD1-201ENST00000257604 RMI2Q96E14 147 aa9.63□□□□□ -0.87
TRAFD1-201ENST00000257604 NKAPP1Q8N9T2 125 aa9.62□□□□□ -0.87
TRAFD1-201ENST00000257604 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
TRAFD1-201ENST00000257604 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
TRAFD1-201ENST00000257604 NDUFC2O95298 119 aa9.61□□□□□ -0.87
TRAFD1-201ENST00000257604 Q6ZQT0 140 aa9.61□□□□□ -0.87
TRAFD1-201ENST00000257604 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
TRAFD1-201ENST00000257604 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
TRAFD1-201ENST00000257604 F8WDY8 70 aa9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 LINC01547P58512 204 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 DIRC1Q969H9 104 aa9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 SRRM2Q9UQ35 2752 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
TRAFD1-201ENST00000257604 Q6ZVQ6 151 aa9.58□□□□□ -0.88
TRAFD1-201ENST00000257604 ATP5EP2Q5VTU8 51 aa9.58□□□□□ -0.88
TRAFD1-201ENST00000257604 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
TRAFD1-201ENST00000257604 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
TRAFD1-201ENST00000257604 VPREB1P12018 145 aa9.56□□□□□ -0.88
TRAFD1-201ENST00000257604 COX7BP24311 80 aa9.55□□□□□ -0.88
TRAFD1-201ENST00000257604 IGLV6-57P01721 117 aa9.54□□□□□ -0.88
TRAFD1-201ENST00000257604 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
TRAFD1-201ENST00000257604 F8WEM9 126 aa9.53□□□□□ -0.88
TRAFD1-201ENST00000257604 DNAH3Q8TD57 4116 aa9.53□□□□□ -0.88
TRAFD1-201ENST00000257604 GVQW2A0A096LPI5 108 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-201ENST00000257604 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
TRAFD1-201ENST00000257604 M0R378 163 aa9.52□□□□□ -0.89
TRAFD1-201ENST00000257604 DNHD1Q96M86 4753 aa9.52□□□□□ -0.89
TRAFD1-201ENST00000257604 H7BZZ5 65 aa9.52□□□□□ -0.89
TRAFD1-201ENST00000257604 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
TRAFD1-201ENST00000257604 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
TRAFD1-201ENST00000257604 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
TRAFD1-201ENST00000257604 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
TRAFD1-201ENST00000257604 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
TRAFD1-201ENST00000257604 LOC110117498A0A087WWA1 95 aa9.49□□□□□ -0.89
TRAFD1-201ENST00000257604 BPY2O14599 106 aa9.49□□□□□ -0.89
TRAFD1-201ENST00000257604 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
TRAFD1-201ENST00000257604 B9D2Q9BPU9 175 aa9.46□□□□□ -0.89
TRAFD1-201ENST00000257604 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
TRAFD1-201ENST00000257604 UBE2BP63146 152 aa9.46□□□□□ -0.9
TRAFD1-201ENST00000257604 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-201ENST00000257604 A0A0G2JQZ4 141 aa9.45□□□□□ -0.9
TRAFD1-201ENST00000257604 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
TRAFD1-201ENST00000257604 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
TRAFD1-201ENST00000257604 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-201ENST00000257604 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
TRAFD1-201ENST00000257604 A0A096LNI7 61 aa9.42□□□□□ -0.9
TRAFD1-201ENST00000257604 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-201ENST00000257604 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
TRAFD1-201ENST00000257604 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-201ENST00000257604 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 PRLHP81277 87 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 KLKP1Q107X0 134 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 CXCL6P80162 114 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
TRAFD1-201ENST00000257604 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-201ENST00000257604 NREPQ16612 68 aa9.39□□□□□ -0.91
TRAFD1-201ENST00000257604 FBN3Q75N90 2809 aa9.39□□□□□ -0.91
TRAFD1-201ENST00000257604 DEFB116Q30KQ4 102 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 PDE6GP18545 87 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 PRR4Q16378 134 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
TRAFD1-201ENST00000257604 FAM229BQ4G0N7 80 aa9.37□□□□□ -0.91
TRAFD1-201ENST00000257604 FAM30AQ9NZY2 134 aa9.37□□□□□ -0.91
TRAFD1-201ENST00000257604 SMIM26A0A096LP01 95 aa9.36□□□□□ -0.91
TRAFD1-201ENST00000257604 ERC2-IT1O76042 136 aa9.36□□□□□ -0.91
TRAFD1-201ENST00000257604 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-201ENST00000257604 TMEM254Q8TBM7 123 aa9.35□□□□□ -0.91
TRAFD1-201ENST00000257604 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
TRAFD1-201ENST00000257604 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
TRAFD1-201ENST00000257604 LY6G6CO95867 125 aa9.33□□□□□ -0.92
TRAFD1-201ENST00000257604 Q9BRP9 147 aa9.33□□□□□ -0.92
TRAFD1-201ENST00000257604 STARD9Q9P2P6 4700 aa9.33□□□□□ -0.92
TRAFD1-201ENST00000257604 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
TRAFD1-201ENST00000257604 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms