RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
LIN28A-201ENST00000254231 TRAV23DV6A0A075B6W5 121 aa7.53□□□□□ -1.2
LIN28A-201ENST00000254231 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
LIN28A-201ENST00000254231 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
LIN28A-201ENST00000254231 LINC00167Q96N53 147 aa7.53□□□□□ -1.2
LIN28A-201ENST00000254231 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
LIN28A-201ENST00000254231 ZNF73O43830 326 aaPredicted RBP7.51□□□□□ -1.21
LIN28A-201ENST00000254231 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
LIN28A-201ENST00000254231 LOC107984640A0A0U1RRK4 108 aa7.51□□□□□ -1.21
LIN28A-201ENST00000254231 A0A087WTM6 91 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 RTL8CO15255 209 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 UPK3BQ9BT76 320 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 A0A087WVE0 104 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 COX17Q14061 63 aa7.5□□□□□ -1.21
LIN28A-201ENST00000254231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
LIN28A-201ENST00000254231 UBE2AP49459 152 aa7.49□□□□□ -1.21
LIN28A-201ENST00000254231 C2orf48Q96LS8 159 aa7.49□□□□□ -1.21
LIN28A-201ENST00000254231 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
LIN28A-201ENST00000254231 HYDINQ4G0P3 5121 aa7.48□□□□□ -1.21
LIN28A-201ENST00000254231 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
LIN28A-201ENST00000254231 VPREB1P12018 145 aa7.48□□□□□ -1.21
LIN28A-201ENST00000254231 INAFM2P0DMQ5 153 aa7.48□□□□□ -1.21
LIN28A-201ENST00000254231 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
LIN28A-201ENST00000254231 COX7BP24311 80 aa7.47□□□□□ -1.21
LIN28A-201ENST00000254231 MRPL55Q7Z7F7 128 aaKnown RBP7.47□□□□□ -1.21
LIN28A-201ENST00000254231 A0A1B0GX51 115 aa7.47□□□□□ -1.21
LIN28A-201ENST00000254231 M0R378 163 aa7.47□□□□□ -1.21
LIN28A-201ENST00000254231 hADV29S1A0JD25 119 aa7.46□□□□□ -1.21
LIN28A-201ENST00000254231 Q8N814 137 aa7.46□□□□□ -1.22
LIN28A-201ENST00000254231 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
LIN28A-201ENST00000254231 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
LIN28A-201ENST00000254231 C14orf177Q52M58 125 aa7.44□□□□□ -1.22
LIN28A-201ENST00000254231 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
LIN28A-201ENST00000254231 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
LIN28A-201ENST00000254231 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
LIN28A-201ENST00000254231 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
LIN28A-201ENST00000254231 ORMDL1Q9P0S3 153 aa7.44□□□□□ -1.22
LIN28A-201ENST00000254231 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
LIN28A-201ENST00000254231 C3orf84H3BNL1 204 aa7.43□□□□□ -1.22
LIN28A-201ENST00000254231 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
LIN28A-201ENST00000254231 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
LIN28A-201ENST00000254231 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
LIN28A-201ENST00000254231 H0YGX0 51 aa7.41□□□□□ -1.22
LIN28A-201ENST00000254231 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
LIN28A-201ENST00000254231 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
LIN28A-201ENST00000254231 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.22
LIN28A-201ENST00000254231 TRACP01848 142 aa7.4□□□□□ -1.22
LIN28A-201ENST00000254231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.4□□□□□ -1.23
LIN28A-201ENST00000254231 ACYP1P07311 99 aa7.39□□□□□ -1.23
LIN28A-201ENST00000254231 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
LIN28A-201ENST00000254231 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
LIN28A-201ENST00000254231 LINC00846Q9NV44 126 aa7.39□□□□□ -1.23
LIN28A-201ENST00000254231 NDUFC2O95298 119 aa7.38□□□□□ -1.23
LIN28A-201ENST00000254231 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
LIN28A-201ENST00000254231 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
LIN28A-201ENST00000254231 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
LIN28A-201ENST00000254231 DNAH11Q96DT5 4516 aa7.37□□□□□ -1.23
LIN28A-201ENST00000254231 KRTAP21-3Q3LHN1 58 aa7.36□□□□□ -1.23
LIN28A-201ENST00000254231 Q6ZR54 194 aa7.35□□□□□ -1.23
LIN28A-201ENST00000254231 UBL5Q9BZL1 73 aa7.35□□□□□ -1.23
LIN28A-201ENST00000254231 VPS13DQ5THJ4 4388 aa7.35□□□□□ -1.23
LIN28A-201ENST00000254231 DSCR8Q96T75 97 aa7.35□□□□□ -1.23
LIN28A-201ENST00000254231 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
LIN28A-201ENST00000254231 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
LIN28A-201ENST00000254231 Q6Q795 121 aa7.34□□□□□ -1.23
LIN28A-201ENST00000254231 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 EPM2AB3EWF7 344 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 GHRHP01286 108 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 UQCRQO14949 82 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
LIN28A-201ENST00000254231 ATOX1O00244 68 aa7.32□□□□□ -1.24
LIN28A-201ENST00000254231 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
LIN28A-201ENST00000254231 RBM3P98179 157 aaKnown RBP7.32□□□□□ -1.24
LIN28A-201ENST00000254231 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
LIN28A-201ENST00000254231 Q9BRP9 147 aa7.31□□□□□ -1.24
LIN28A-201ENST00000254231 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
LIN28A-201ENST00000254231 TMEM256-PLSCR3K7ERE1 68 aa7.3□□□□□ -1.24
LIN28A-201ENST00000254231 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
LIN28A-201ENST00000254231 F8WEM9 126 aa7.3□□□□□ -1.24
LIN28A-201ENST00000254231 CCKP06307 115 aa7.3□□□□□ -1.24
LIN28A-201ENST00000254231 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
LIN28A-201ENST00000254231 COX7CP15954 63 aa7.29□□□□□ -1.24
LIN28A-201ENST00000254231 Q8N9L7 120 aa7.29□□□□□ -1.24
LIN28A-201ENST00000254231 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
LIN28A-201ENST00000254231 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
LIN28A-201ENST00000254231 Q6ZRX8 168 aa7.28□□□□□ -1.24
LIN28A-201ENST00000254231 DNAH2Q9P225 4427 aa7.27□□□□□ -1.25
LIN28A-201ENST00000254231 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
LIN28A-201ENST00000254231 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
LIN28A-201ENST00000254231 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
LIN28A-201ENST00000254231 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
LIN28A-201ENST00000254231 FAT1Q14517 4588 aa7.25□□□□□ -1.25
LIN28A-201ENST00000254231 J3KT08 172 aa7.25□□□□□ -1.25
LIN28A-201ENST00000254231 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
LIN28A-201ENST00000254231 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
LIN28A-201ENST00000254231 Q8N377 158 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms