RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
HIF3A-202ENST00000244303 FAM236DA0A1B0GTK5 79 aa9.43□□□□□ -0.9
HIF3A-202ENST00000244303 FAM236CP0DP71 79 aa9.43□□□□□ -0.9
HIF3A-202ENST00000244303 C4orf26Q17RF5 130 aa9.43□□□□□ -0.9
HIF3A-202ENST00000244303 MAST4O15021 2626 aa9.42□□□□□ -0.9
HIF3A-202ENST00000244303 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
HIF3A-202ENST00000244303 F8WDY8 70 aa9.41□□□□□ -0.9
HIF3A-202ENST00000244303 BCE1O60756 84 aa9.41□□□□□ -0.9
HIF3A-202ENST00000244303 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
HIF3A-202ENST00000244303 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
HIF3A-202ENST00000244303 CXCL6P80162 114 aa9.39□□□□□ -0.91
HIF3A-202ENST00000244303 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
HIF3A-202ENST00000244303 Q5XG85 94 aa9.39□□□□□ -0.91
HIF3A-202ENST00000244303 NKAPP1Q8N9T2 125 aa9.39□□□□□ -0.91
HIF3A-202ENST00000244303 K7EIL1 84 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 DNAH1Q9P2D7 4330 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 H7BZZ5 65 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 MRAPQ8TCY5 172 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
HIF3A-202ENST00000244303 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
HIF3A-202ENST00000244303 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
HIF3A-202ENST00000244303 COL6A5A8TX70 2615 aa9.36□□□□□ -0.91
HIF3A-202ENST00000244303 NOTCH1P46531 2555 aa9.36□□□□□ -0.91
HIF3A-202ENST00000244303 RMI2Q96E14 147 aa9.35□□□□□ -0.91
HIF3A-202ENST00000244303 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
HIF3A-202ENST00000244303 SERP1Q9Y6X1 66 aa9.35□□□□□ -0.91
HIF3A-202ENST00000244303 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
HIF3A-202ENST00000244303 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
HIF3A-202ENST00000244303 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
HIF3A-202ENST00000244303 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
HIF3A-202ENST00000244303 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
HIF3A-202ENST00000244303 F8WEM9 126 aa9.33□□□□□ -0.92
HIF3A-202ENST00000244303 DEFB105AQ8NG35 78 aa9.33□□□□□ -0.92
HIF3A-202ENST00000244303 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
HIF3A-202ENST00000244303 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
HIF3A-202ENST00000244303 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
HIF3A-202ENST00000244303 Q8N377 158 aa9.3□□□□□ -0.92
HIF3A-202ENST00000244303 Q6ZRX8 168 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
HIF3A-202ENST00000244303 BPY2O14599 106 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 NREPQ16612 68 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 Q9BRP9 147 aa9.28□□□□□ -0.92
HIF3A-202ENST00000244303 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
HIF3A-202ENST00000244303 NDUFC1O43677 76 aa9.27□□□□□ -0.93
HIF3A-202ENST00000244303 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 PRYO14603 147 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 Q8N9L7 120 aa9.26□□□□□ -0.93
HIF3A-202ENST00000244303 IGLV5-48A0A075B6I7 105 aa9.25□□□□□ -0.93
HIF3A-202ENST00000244303 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
HIF3A-202ENST00000244303 SPRR1AP35321 89 aa9.25□□□□□ -0.93
HIF3A-202ENST00000244303 LYSTQ99698 3801 aa9.24□□□□□ -0.93
HIF3A-202ENST00000244303 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
HIF3A-202ENST00000244303 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
HIF3A-202ENST00000244303 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
HIF3A-202ENST00000244303 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
HIF3A-202ENST00000244303 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
HIF3A-202ENST00000244303 IGKV4-1P06312 121 aa9.21□□□□□ -0.93
HIF3A-202ENST00000244303 ATP5EP56381 51 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-202ENST00000244303 MDFIQ99750 246 aa9.2□□□□□ -0.94
HIF3A-202ENST00000244303 TNP2Q05952 138 aa9.2□□□□□ -0.94
HIF3A-202ENST00000244303 MGAM2Q2M2H8 2515 aa9.19□□□□□ -0.94
HIF3A-202ENST00000244303 ERC2-IT1O76042 136 aa9.19□□□□□ -0.94
HIF3A-202ENST00000244303 A0A1W2PNM2 257 aa9.19□□□□□ -0.94
HIF3A-202ENST00000244303 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
HIF3A-202ENST00000244303 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
HIF3A-202ENST00000244303 UBE2BP63146 152 aa9.17□□□□□ -0.94
HIF3A-202ENST00000244303 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
HIF3A-202ENST00000244303 LINC00336Q6ZUF6 198 aa9.17□□□□□ -0.94
HIF3A-202ENST00000244303 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
HIF3A-202ENST00000244303 LINC00474Q9P2X8 69 aa9.16□□□□□ -0.94
HIF3A-202ENST00000244303 REG3GQ6UW15 175 aa9.16□□□□□ -0.94
HIF3A-202ENST00000244303 KRTAP1-5Q9BYS1 174 aa9.15□□□□□ -0.95
HIF3A-202ENST00000244303 Q8NBF4 154 aa9.14□□□□□ -0.95
HIF3A-202ENST00000244303 A0A1B0GW54 56 aa9.14□□□□□ -0.95
HIF3A-202ENST00000244303 OCR1Q9BZK8 76 aa9.14□□□□□ -0.95
HIF3A-202ENST00000244303 PRO0628Q9UI54 55 aa9.14□□□□□ -0.95
HIF3A-202ENST00000244303 A0A096LNI7 61 aa9.13□□□□□ -0.95
HIF3A-202ENST00000244303 COL7A1Q02388 2944 aa9.13□□□□□ -0.95
HIF3A-202ENST00000244303 IGKV2-24A0A0C4DH68 120 aa9.12□□□□□ -0.95
HIF3A-202ENST00000244303 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
HIF3A-202ENST00000244303 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
HIF3A-202ENST00000244303 B9D2Q9BPU9 175 aa9.11□□□□□ -0.95
HIF3A-202ENST00000244303 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
HIF3A-202ENST00000244303 SMIM29Q86T20 159 aa9.11□□□□□ -0.95
HIF3A-202ENST00000244303 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
HIF3A-202ENST00000244303 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
HIF3A-202ENST00000244303 FAM30AQ9NZY2 134 aa9.1□□□□□ -0.95
HIF3A-202ENST00000244303 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
HIF3A-202ENST00000244303 PSCAO43653 123 aa9.09□□□□□ -0.95
HIF3A-202ENST00000244303 MPLKIPQ8TAP9 179 aa9.09□□□□□ -0.95
HIF3A-202ENST00000244303 PRLHP81277 87 aa9.08□□□□□ -0.96
HIF3A-202ENST00000244303 UBE2DNLQ8IWF7 75 aa9.08□□□□□ -0.96
HIF3A-202ENST00000244303 CNBPP62633 177 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms