RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
DDX55-201ENST00000238146 A0A0U1RQV1 116 aa10.14□□□□□ -0.79
DDX55-201ENST00000238146 KCNQ1DNQ9H478 68 aa10.14□□□□□ -0.79
DDX55-201ENST00000238146 PRYO14603 147 aa10.13□□□□□ -0.79
DDX55-201ENST00000238146 PRO0628Q9UI54 55 aa10.13□□□□□ -0.79
DDX55-201ENST00000238146 IGLV5-48A0A075B6I7 105 aa10.12□□□□□ -0.79
DDX55-201ENST00000238146 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
DDX55-201ENST00000238146 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
DDX55-201ENST00000238146 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
DDX55-201ENST00000238146 H3BNG1 76 aa10.11□□□□□ -0.79
DDX55-201ENST00000238146 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
DDX55-201ENST00000238146 SYCNQ0VAF6 134 aa10.1□□□□□ -0.79
DDX55-201ENST00000238146 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
DDX55-201ENST00000238146 FASNP49327 2511 aaKnown RBP10.1□□□□□ -0.79
DDX55-201ENST00000238146 ESRGQ1W209 222 aa10.1□□□□□ -0.79
DDX55-201ENST00000238146 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
DDX55-201ENST00000238146 HIGD2AQ9BW72 106 aa10.09□□□□□ -0.79
DDX55-201ENST00000238146 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
DDX55-201ENST00000238146 Q6ZTC4 211 aa10.08□□□□□ -0.8
DDX55-201ENST00000238146 PKD1L1Q8TDX9 2849 aa10.08□□□□□ -0.8
DDX55-201ENST00000238146 ATRQ13535 2644 aa10.07□□□□□ -0.8
DDX55-201ENST00000238146 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
DDX55-201ENST00000238146 RETNQ9HD89 108 aa10.07□□□□□ -0.8
DDX55-201ENST00000238146 F8WDY8 70 aa10.07□□□□□ -0.8
DDX55-201ENST00000238146 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX55-201ENST00000238146 SMIM29Q86T20 159 aa10.06□□□□□ -0.8
DDX55-201ENST00000238146 Q9BRP9 147 aa10.05□□□□□ -0.8
DDX55-201ENST00000238146 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
DDX55-201ENST00000238146 Q6ZRX8 168 aa10.05□□□□□ -0.8
DDX55-201ENST00000238146 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 DHRS4-AS1Q9P1J3 65 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 A0A1B0GW54 56 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 RPL37AP8A6NKH3 93 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 TNP2Q05952 138 aa10.04□□□□□ -0.8
DDX55-201ENST00000238146 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
DDX55-201ENST00000238146 KRTAP4-16G5E9R7 235 aaPredicted RBP10.03□□□□□ -0.8
DDX55-201ENST00000238146 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
DDX55-201ENST00000238146 INAFM1C9JVW0 142 aa10.02□□□□□ -0.8
DDX55-201ENST00000238146 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
DDX55-201ENST00000238146 ST20-AS1Q8NBB2 130 aa10.01□□□□□ -0.81
DDX55-201ENST00000238146 Q8NBF4 154 aa10.01□□□□□ -0.81
DDX55-201ENST00000238146 OTOGQ6ZRI0 2925 aa10.01□□□□□ -0.81
DDX55-201ENST00000238146 LCE6AA0A183 80 aa10□□□□□ -0.81
DDX55-201ENST00000238146 FAM168BA1KXE4 195 aa10□□□□□ -0.81
DDX55-201ENST00000238146 IGLV1-50A0A075B6I6 118 aa10□□□□□ -0.81
DDX55-201ENST00000238146 PLA2G2DQ9UNK4 145 aa10□□□□□ -0.81
DDX55-201ENST00000238146 NSD1Q96L73 2696 aaPredicted RBP10□□□□□ -0.81
DDX55-201ENST00000238146 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
DDX55-201ENST00000238146 SPRR1AP35321 89 aa10□□□□□ -0.81
DDX55-201ENST00000238146 ETDCA0A1B0GVM5 59 aa9.99□□□□□ -0.81
DDX55-201ENST00000238146 DSCR10P59022 87 aa9.98□□□□□ -0.81
DDX55-201ENST00000238146 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
DDX55-201ENST00000238146 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
DDX55-201ENST00000238146 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
DDX55-201ENST00000238146 IGLV5-37A0A075B6J1 123 aa9.96□□□□□ -0.81
DDX55-201ENST00000238146 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
DDX55-201ENST00000238146 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
DDX55-201ENST00000238146 K7EQZ3 153 aa9.95□□□□□ -0.82
DDX55-201ENST00000238146 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
DDX55-201ENST00000238146 DNAH10OSP0CZ25 163 aa9.93□□□□□ -0.82
DDX55-201ENST00000238146 ZCCHC13Q8WW36 166 aaKnown RBP9.93□□□□□ -0.82
DDX55-201ENST00000238146 KRTAP10-11P60412 298 aa9.93□□□□□ -0.82
DDX55-201ENST00000238146 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
DDX55-201ENST00000238146 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
DDX55-201ENST00000238146 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
DDX55-201ENST00000238146 J3QKU1 62 aa9.91□□□□□ -0.82
DDX55-201ENST00000238146 UBE2BP63146 152 aa9.9□□□□□ -0.82
DDX55-201ENST00000238146 MRPL55Q7Z7F7 128 aaKnown RBP9.9□□□□□ -0.82
DDX55-201ENST00000238146 HECTD1Q9ULT8 2610 aa9.89□□□□□ -0.83
DDX55-201ENST00000238146 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
DDX55-201ENST00000238146 C1orf64Q8NEQ6 169 aa9.89□□□□□ -0.83
DDX55-201ENST00000238146 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
DDX55-201ENST00000238146 ANK2Q01484 3957 aa9.88□□□□□ -0.83
DDX55-201ENST00000238146 A0A0G2JQZ4 141 aa9.88□□□□□ -0.83
DDX55-201ENST00000238146 A0A1W2PNN7 141 aa9.88□□□□□ -0.83
DDX55-201ENST00000238146 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
DDX55-201ENST00000238146 LINC00476Q8WZB0 136 aa9.88□□□□□ -0.83
DDX55-201ENST00000238146 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
DDX55-201ENST00000238146 F8P00451 2351 aa9.86□□□□□ -0.83
DDX55-201ENST00000238146 PSCAO43653 123 aa9.85□□□□□ -0.83
DDX55-201ENST00000238146 REG3GQ6UW15 175 aa9.85□□□□□ -0.83
DDX55-201ENST00000238146 LINC00588Q9Y4M8 146 aa9.84□□□□□ -0.83
DDX55-201ENST00000238146 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
DDX55-201ENST00000238146 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
DDX55-201ENST00000238146 Q1T7F1 81 aa9.81□□□□□ -0.84
DDX55-201ENST00000238146 PRR4Q16378 134 aa9.8□□□□□ -0.84
DDX55-201ENST00000238146 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
DDX55-201ENST00000238146 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
DDX55-201ENST00000238146 WFDC13Q8IUB5 93 aa9.79□□□□□ -0.84
DDX55-201ENST00000238146 BAHCC1Q9P281 2608 aa9.79□□□□□ -0.84
DDX55-201ENST00000238146 FLNBO75369 2602 aaKnown RBP9.78□□□□□ -0.84
DDX55-201ENST00000238146 A0A087WSZ3 146 aa9.78□□□□□ -0.84
DDX55-201ENST00000238146 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
DDX55-201ENST00000238146 PRLHP81277 87 aa9.77□□□□□ -0.85
DDX55-201ENST00000238146 IGLV8-61A0A075B6I0 122 aa9.75□□□□□ -0.85
DDX55-201ENST00000238146 NDUFB1O75438 58 aa9.75□□□□□ -0.85
DDX55-201ENST00000238146 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
DDX55-201ENST00000238146 MP68P56378 58 aa9.73□□□□□ -0.85
DDX55-201ENST00000238146 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms