RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 HAMPP81172 84 aa10.71□□□□□ -0.69
LTBR-201ENST00000228918 IGKV2D-24A0A075B6R9 120 aa10.7□□□□□ -0.7
LTBR-201ENST00000228918 F8WDY8 70 aa10.7□□□□□ -0.7
LTBR-201ENST00000228918 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
LTBR-201ENST00000228918 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
LTBR-201ENST00000228918 CXCL6P80162 114 aa10.69□□□□□ -0.7
LTBR-201ENST00000228918 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
LTBR-201ENST00000228918 DEFB131BA0A096LNP1 70 aa10.68□□□□□ -0.7
LTBR-201ENST00000228918 SYCNQ0VAF6 134 aa10.68□□□□□ -0.7
LTBR-201ENST00000228918 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
LTBR-201ENST00000228918 PRO0628Q9UI54 55 aa10.65□□□□□ -0.7
LTBR-201ENST00000228918 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
LTBR-201ENST00000228918 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
LTBR-201ENST00000228918 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
LTBR-201ENST00000228918 TRAV10A0A0B4J240 114 aa10.63□□□□□ -0.71
LTBR-201ENST00000228918 SERTAD4-AS1Q5TG53 156 aa10.63□□□□□ -0.71
LTBR-201ENST00000228918 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
LTBR-201ENST00000228918 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
LTBR-201ENST00000228918 F8P00451 2351 aa10.61□□□□□ -0.71
LTBR-201ENST00000228918 SCXQ7RTU7 201 aa10.61□□□□□ -0.71
LTBR-201ENST00000228918 C7orf33Q8WU49 177 aa10.61□□□□□ -0.71
LTBR-201ENST00000228918 SMIM26A0A096LP01 95 aa10.6□□□□□ -0.71
LTBR-201ENST00000228918 FP248Q71RG6 208 aaPredicted RBP10.6□□□□□ -0.71
LTBR-201ENST00000228918 RMI2Q96E14 147 aa10.6□□□□□ -0.71
LTBR-201ENST00000228918 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
LTBR-201ENST00000228918 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
LTBR-201ENST00000228918 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
LTBR-201ENST00000228918 F8WEM9 126 aa10.58□□□□□ -0.72
LTBR-201ENST00000228918 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
LTBR-201ENST00000228918 NDUFC1O43677 76 aa10.55□□□□□ -0.72
LTBR-201ENST00000228918 STAB1Q9NY15 2570 aa10.55□□□□□ -0.72
LTBR-201ENST00000228918 Q8N377 158 aa10.55□□□□□ -0.72
LTBR-201ENST00000228918 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
LTBR-201ENST00000228918 LINC00588Q9Y4M8 146 aa10.54□□□□□ -0.72
LTBR-201ENST00000228918 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
LTBR-201ENST00000228918 CASC10Q5T4H9 136 aa10.53□□□□□ -0.72
LTBR-201ENST00000228918 DEFB105AQ8NG35 78 aa10.53□□□□□ -0.72
LTBR-201ENST00000228918 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
LTBR-201ENST00000228918 Q6ZRX8 168 aa10.53□□□□□ -0.72
LTBR-201ENST00000228918 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
LTBR-201ENST00000228918 FAM168BA1KXE4 195 aa10.52□□□□□ -0.73
LTBR-201ENST00000228918 PRYO14603 147 aa10.52□□□□□ -0.73
LTBR-201ENST00000228918 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.73
LTBR-201ENST00000228918 TM2D3Q9BRN9 247 aa10.52□□□□□ -0.73
LTBR-201ENST00000228918 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.73
LTBR-201ENST00000228918 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
LTBR-201ENST00000228918 RPL37AP8A6NKH3 93 aa10.51□□□□□ -0.73
LTBR-201ENST00000228918 SPRR1AP35321 89 aa10.5□□□□□ -0.73
LTBR-201ENST00000228918 Q9BRP9 147 aa10.5□□□□□ -0.73
LTBR-201ENST00000228918 FBN1P35555 2871 aaKnown RBP10.5□□□□□ -0.73
LTBR-201ENST00000228918 NREPQ16612 68 aa10.5□□□□□ -0.73
LTBR-201ENST00000228918 C3orf84H3BNL1 204 aa10.49□□□□□ -0.73
LTBR-201ENST00000228918 IGKV4-1P06312 121 aa10.49□□□□□ -0.73
LTBR-201ENST00000228918 KRTAP7-1Q8IUC3 87 aa10.49□□□□□ -0.73
LTBR-201ENST00000228918 LINC00474Q9P2X8 69 aa10.49□□□□□ -0.73
LTBR-201ENST00000228918 Q8N9L7 120 aa10.49□□□□□ -0.73
LTBR-201ENST00000228918 ETDCA0A1B0GVM5 59 aa10.47□□□□□ -0.73
LTBR-201ENST00000228918 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
LTBR-201ENST00000228918 BPY2O14599 106 aa10.46□□□□□ -0.74
LTBR-201ENST00000228918 ERC2-IT1O76042 136 aa10.46□□□□□ -0.74
LTBR-201ENST00000228918 TNP2Q05952 138 aa10.46□□□□□ -0.74
LTBR-201ENST00000228918 TMEM254Q8TBM7 123 aa10.45□□□□□ -0.74
LTBR-201ENST00000228918 MRPL55Q7Z7F7 128 aaKnown RBP10.44□□□□□ -0.74
LTBR-201ENST00000228918 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
LTBR-201ENST00000228918 A0A1B0GW54 56 aa10.43□□□□□ -0.74
LTBR-201ENST00000228918 A0A1W2PNM2 257 aa10.43□□□□□ -0.74
LTBR-201ENST00000228918 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
LTBR-201ENST00000228918 HUWE1Q7Z6Z7 4374 aaKnown RBP10.43□□□□□ -0.74
LTBR-201ENST00000228918 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
LTBR-201ENST00000228918 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
LTBR-201ENST00000228918 PKIGQ9Y2B9 76 aa10.41□□□□□ -0.74
LTBR-201ENST00000228918 Q8NBF4 154 aa10.4□□□□□ -0.75
LTBR-201ENST00000228918 OCR1Q9BZK8 76 aa10.39□□□□□ -0.75
LTBR-201ENST00000228918 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
LTBR-201ENST00000228918 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
LTBR-201ENST00000228918 UBE2BP63146 152 aa10.37□□□□□ -0.75
LTBR-201ENST00000228918 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
LTBR-201ENST00000228918 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
LTBR-201ENST00000228918 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
LTBR-201ENST00000228918 K7EIL1 84 aa10.36□□□□□ -0.75
LTBR-201ENST00000228918 NBEAL1Q6ZS30 2694 aa10.35□□□□□ -0.75
LTBR-201ENST00000228918 SMIM29Q86T20 159 aa10.33□□□□□ -0.76
LTBR-201ENST00000228918 MPLKIPQ8TAP9 179 aa10.32□□□□□ -0.76
LTBR-201ENST00000228918 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
LTBR-201ENST00000228918 A0A096LNI7 61 aa10.31□□□□□ -0.76
LTBR-201ENST00000228918 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
LTBR-201ENST00000228918 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
LTBR-201ENST00000228918 C1orf195Q5TG92 126 aa10.29□□□□□ -0.76
LTBR-201ENST00000228918 LINC00476Q8WZB0 136 aa10.29□□□□□ -0.76
LTBR-201ENST00000228918 DSCR10P59022 87 aa10.28□□□□□ -0.76
LTBR-201ENST00000228918 CNBPP62633 177 aaKnown RBP10.28□□□□□ -0.76
LTBR-201ENST00000228918 LYSTQ99698 3801 aa10.28□□□□□ -0.76
LTBR-201ENST00000228918 COL6A5A8TX70 2615 aa10.28□□□□□ -0.76
LTBR-201ENST00000228918 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
LTBR-201ENST00000228918 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
LTBR-201ENST00000228918 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
LTBR-201ENST00000228918 PRLHP81277 87 aa10.26□□□□□ -0.77
LTBR-201ENST00000228918 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
LTBR-201ENST00000228918 K7EQZ3 153 aa10.24□□□□□ -0.77
LTBR-201ENST00000228918 DNAH9Q9NYC9 4486 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms