RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ANAPC13Q9BS18 74 aa12.32□□□□□ -0.44
YBX3-201ENST00000228251 DNAH7Q8WXX0 4024 aa12.32□□□□□ -0.44
YBX3-201ENST00000228251 DNHD1Q96M86 4753 aa12.31□□□□□ -0.44
YBX3-201ENST00000228251 VPS13DQ5THJ4 4388 aa12.31□□□□□ -0.44
YBX3-201ENST00000228251 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
YBX3-201ENST00000228251 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
YBX3-201ENST00000228251 SPRR1AP35321 89 aa12.3□□□□□ -0.44
YBX3-201ENST00000228251 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
YBX3-201ENST00000228251 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
YBX3-201ENST00000228251 LAMTOR3Q9UHA4 124 aa12.29□□□□□ -0.44
YBX3-201ENST00000228251 PRYO14603 147 aa12.28□□□□□ -0.44
YBX3-201ENST00000228251 GHRHP01286 108 aa12.28□□□□□ -0.44
YBX3-201ENST00000228251 UBE2DNLQ8IWF7 75 aa12.27□□□□□ -0.45
YBX3-201ENST00000228251 TENM2Q9NT68 2774 aa12.27□□□□□ -0.45
YBX3-201ENST00000228251 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
YBX3-201ENST00000228251 M0R2N4 97 aa12.25□□□□□ -0.45
YBX3-201ENST00000228251 PDE6GP18545 87 aa12.25□□□□□ -0.45
YBX3-201ENST00000228251 B5MCH6 92 aa12.24□□□□□ -0.45
YBX3-201ENST00000228251 FAM236AA0A1B0GUQ0 79 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 FAM236BA0A1B0GV22 79 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 NUPR2A6NF83 97 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
YBX3-201ENST00000228251 Q6ZRX8 168 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 STARD9Q9P2P6 4700 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
YBX3-201ENST00000228251 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
YBX3-201ENST00000228251 IGKV3D-7A0A0C4DH55 119 aa12.21□□□□□ -0.45
YBX3-201ENST00000228251 LINC01547P58512 204 aaPredicted RBP12.21□□□□□ -0.45
YBX3-201ENST00000228251 Q9BRP9 147 aa12.21□□□□□ -0.45
YBX3-201ENST00000228251 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
YBX3-201ENST00000228251 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
YBX3-201ENST00000228251 A0A096LNI7 61 aa12.2□□□□□ -0.46
YBX3-201ENST00000228251 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
YBX3-201ENST00000228251 PSCAO43653 123 aa12.18□□□□□ -0.46
YBX3-201ENST00000228251 ATP5EP2Q5VTU8 51 aa12.18□□□□□ -0.46
YBX3-201ENST00000228251 NBDYA0A0U1RRE5 68 aa12.18□□□□□ -0.46
YBX3-201ENST00000228251 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
YBX3-201ENST00000228251 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
YBX3-201ENST00000228251 Q8N377 158 aa12.18□□□□□ -0.46
YBX3-201ENST00000228251 MEGF8Q7Z7M0 2845 aa12.17□□□□□ -0.46
YBX3-201ENST00000228251 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
YBX3-201ENST00000228251 UBL5Q9BZL1 73 aa12.15□□□□□ -0.46
YBX3-201ENST00000228251 ETDCA0A1B0GVM5 59 aa12.15□□□□□ -0.46
YBX3-201ENST00000228251 A0A1W2PNN7 141 aa12.14□□□□□ -0.47
YBX3-201ENST00000228251 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
YBX3-201ENST00000228251 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
YBX3-201ENST00000228251 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
YBX3-201ENST00000228251 REG3GQ6UW15 175 aa12.11□□□□□ -0.47
YBX3-201ENST00000228251 Q6ZVQ6 151 aa12.11□□□□□ -0.47
YBX3-201ENST00000228251 A0A087WVE0 104 aa12.1□□□□□ -0.47
YBX3-201ENST00000228251 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
YBX3-201ENST00000228251 ERC2-IT1O76042 136 aa12.1□□□□□ -0.47
YBX3-201ENST00000228251 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
YBX3-201ENST00000228251 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
YBX3-201ENST00000228251 TNP2Q05952 138 aa12.09□□□□□ -0.47
YBX3-201ENST00000228251 ST20-AS1Q8NBB2 130 aa12.07□□□□□ -0.48
YBX3-201ENST00000228251 DEFB105AQ8NG35 78 aa12.07□□□□□ -0.48
YBX3-201ENST00000228251 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
YBX3-201ENST00000228251 ATOX1O00244 68 aa12.05□□□□□ -0.48
YBX3-201ENST00000228251 CHTF8P0CG12 524 aa12.05□□□□□ -0.48
YBX3-201ENST00000228251 DNAH17Q9UFH2 4485 aa12.04□□□□□ -0.48
YBX3-201ENST00000228251 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
YBX3-201ENST00000228251 CXCL6P80162 114 aa12.02□□□□□ -0.48
YBX3-201ENST00000228251 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.48
YBX3-201ENST00000228251 UBE2BP63146 152 aa12.02□□□□□ -0.49
YBX3-201ENST00000228251 KRTAP11-1Q8IUC1 163 aa12.02□□□□□ -0.49
YBX3-201ENST00000228251 SMIM29Q86T20 159 aa12□□□□□ -0.49
YBX3-201ENST00000228251 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
YBX3-201ENST00000228251 UQCRQO14949 82 aa11.98□□□□□ -0.49
YBX3-201ENST00000228251 Q6ZR54 194 aa11.98□□□□□ -0.49
YBX3-201ENST00000228251 PHF5AQ7RTV0 110 aaKnown RBP11.98□□□□□ -0.49
YBX3-201ENST00000228251 EPM2AB3EWF7 344 aa11.97□□□□□ -0.49
YBX3-201ENST00000228251 COX7CP15954 63 aa11.97□□□□□ -0.49
YBX3-201ENST00000228251 HAMPP81172 84 aa11.97□□□□□ -0.49
YBX3-201ENST00000228251 A0A1W2PNM2 257 aa11.97□□□□□ -0.49
YBX3-201ENST00000228251 PANO1I0J062 215 aa11.97□□□□□ -0.49
YBX3-201ENST00000228251 HECTD4Q9Y4D8 3996 aa11.96□□□□□ -0.49
YBX3-201ENST00000228251 A0A1B0GW54 56 aa11.96□□□□□ -0.49
YBX3-201ENST00000228251 PRLHP81277 87 aa11.96□□□□□ -0.49
YBX3-201ENST00000228251 DNAH6Q9C0G6 4158 aa11.96□□□□□ -0.49
YBX3-201ENST00000228251 H0Y9J4 135 aa11.95□□□□□ -0.5
YBX3-201ENST00000228251 LINC00474Q9P2X8 69 aa11.95□□□□□ -0.5
YBX3-201ENST00000228251 KMT2AQ03164 3969 aa11.95□□□□□ -0.5
YBX3-201ENST00000228251 A0A087WTM6 91 aa11.94□□□□□ -0.5
YBX3-201ENST00000228251 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
YBX3-201ENST00000228251 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
YBX3-201ENST00000228251 Q8NBF4 154 aa11.92□□□□□ -0.5
YBX3-201ENST00000228251 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
YBX3-201ENST00000228251 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
YBX3-201ENST00000228251 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.51
YBX3-201ENST00000228251 FBN3Q75N90 2809 aa11.89□□□□□ -0.51
YBX3-201ENST00000228251 C3orf84H3BNL1 204 aa11.89□□□□□ -0.51
YBX3-201ENST00000228251 BCE1O60756 84 aa11.89□□□□□ -0.51
YBX3-201ENST00000228251 SCXQ7RTU7 201 aa11.89□□□□□ -0.51
YBX3-201ENST00000228251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
YBX3-201ENST00000228251 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
YBX3-201ENST00000228251 CRYGAP11844 174 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 SPRR1BP22528 89 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 NREPQ16612 68 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms