RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
VTI1B-201ENST00000216456 NDUFC2O95298 119 aa12.42□□□□□ -0.42
VTI1B-201ENST00000216456 E9PLD3 99 aa12.4□□□□□ -0.42
VTI1B-201ENST00000216456 Q8N377 158 aa12.39□□□□□ -0.43
VTI1B-201ENST00000216456 KRTAP4-1Q9BYQ7 146 aa12.39□□□□□ -0.43
VTI1B-201ENST00000216456 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
VTI1B-201ENST00000216456 LITAFQ99732 161 aa12.38□□□□□ -0.43
VTI1B-201ENST00000216456 SYS1-DBNDD2H3BUS1 97 aa12.37□□□□□ -0.43
VTI1B-201ENST00000216456 SSBP3-AS1Q7Z2R9 100 aa12.37□□□□□ -0.43
VTI1B-201ENST00000216456 TTTY13Q9BZ97 58 aa12.37□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
VTI1B-201ENST00000216456 C9orf153Q5TBE3 101 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
VTI1B-201ENST00000216456 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
VTI1B-201ENST00000216456 ASB16-AS1Q495Z4 193 aa12.32□□□□□ -0.44
VTI1B-201ENST00000216456 JOSD1Q15040 202 aaPredicted RBP12.31□□□□□ -0.44
VTI1B-201ENST00000216456 OR13C6PQ8NH95 151 aa12.31□□□□□ -0.44
VTI1B-201ENST00000216456 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
VTI1B-201ENST00000216456 RPS29P62273 56 aaKnown RBP12.29□□□□□ -0.44
VTI1B-201ENST00000216456 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
VTI1B-201ENST00000216456 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
VTI1B-201ENST00000216456 SLC25A20O43772 301 aa12.27□□□□□ -0.45
VTI1B-201ENST00000216456 HRCT1Q6UXD1 115 aa12.26□□□□□ -0.45
VTI1B-201ENST00000216456 TIMM17BO60830 172 aa12.24□□□□□ -0.45
VTI1B-201ENST00000216456 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
VTI1B-201ENST00000216456 PET117Q6UWS5 81 aa12.24□□□□□ -0.45
VTI1B-201ENST00000216456 HINT1P49773 126 aaPredicted RBP12.22□□□□□ -0.45
VTI1B-201ENST00000216456 XP32Q5T750 250 aa12.22□□□□□ -0.45
VTI1B-201ENST00000216456 SPRR1BP22528 89 aa12.2□□□□□ -0.46
VTI1B-201ENST00000216456 SEC61BP60468 96 aaKnown RBP12.2□□□□□ -0.46
VTI1B-201ENST00000216456 C6orf99Q4VX62 202 aa12.2□□□□□ -0.46
VTI1B-201ENST00000216456 SPANXDQ9BXN6 97 aa12.2□□□□□ -0.46
VTI1B-201ENST00000216456 KRTDAPP60985 99 aa12.19□□□□□ -0.46
VTI1B-201ENST00000216456 COX7BP24311 80 aa12.17□□□□□ -0.46
VTI1B-201ENST00000216456 ELOF1P60002 83 aaKnown RBP12.17□□□□□ -0.46
VTI1B-201ENST00000216456 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
VTI1B-201ENST00000216456 DEFB105AQ8NG35 78 aa12.17□□□□□ -0.46
VTI1B-201ENST00000216456 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
VTI1B-201ENST00000216456 C5orf52A6NGY3 159 aa12.16□□□□□ -0.46
VTI1B-201ENST00000216456 Q1RN00 199 aa12.16□□□□□ -0.46
VTI1B-201ENST00000216456 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
VTI1B-201ENST00000216456 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
VTI1B-201ENST00000216456 A0A0G2JQZ4 141 aa12.13□□□□□ -0.47
VTI1B-201ENST00000216456 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
VTI1B-201ENST00000216456 C9orf92A6NGG3 77 aa12.11□□□□□ -0.47
VTI1B-201ENST00000216456 COA6Q5JTJ3 125 aaKnown RBP12.11□□□□□ -0.47
VTI1B-201ENST00000216456 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
VTI1B-201ENST00000216456 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
VTI1B-201ENST00000216456 H7C2G1 150 aa12.1□□□□□ -0.47
VTI1B-201ENST00000216456 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
VTI1B-201ENST00000216456 TAL2Q16559 108 aa12.1□□□□□ -0.47
VTI1B-201ENST00000216456 PCP2Q8IVA1 136 aa12.1□□□□□ -0.47
VTI1B-201ENST00000216456 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
VTI1B-201ENST00000216456 SMIM29Q86T20 159 aa12.08□□□□□ -0.48
VTI1B-201ENST00000216456 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
VTI1B-201ENST00000216456 LIMD2Q9BT23 127 aa12.07□□□□□ -0.48
VTI1B-201ENST00000216456 A6NDN8 102 aa12.06□□□□□ -0.48
VTI1B-201ENST00000216456 LCE2CQ5TA81 110 aa12.06□□□□□ -0.48
VTI1B-201ENST00000216456 KRTAP9-6A0A140TA67 174 aa12.04□□□□□ -0.48
VTI1B-201ENST00000216456 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
VTI1B-201ENST00000216456 PCOTHQ58A44 107 aa12.04□□□□□ -0.48
VTI1B-201ENST00000216456 KRTAP19-2Q3LHN2 52 aa12.02□□□□□ -0.49
VTI1B-201ENST00000216456 PRO1933Q9H354 126 aa12.02□□□□□ -0.49
VTI1B-201ENST00000216456 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
VTI1B-201ENST00000216456 C20orf202A1L168 122 aa12.01□□□□□ -0.49
VTI1B-201ENST00000216456 A0A1B0GWB2 263 aa12□□□□□ -0.49
VTI1B-201ENST00000216456 IFITM1P13164 125 aa12□□□□□ -0.49
VTI1B-201ENST00000216456 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
VTI1B-201ENST00000216456 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
VTI1B-201ENST00000216456 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
VTI1B-201ENST00000216456 CD164Q04900 197 aa11.97□□□□□ -0.49
VTI1B-201ENST00000216456 AKR1D1P51857 326 aa11.96□□□□□ -0.49
VTI1B-201ENST00000216456 C1orf195Q5TG92 126 aa11.96□□□□□ -0.49
VTI1B-201ENST00000216456 Q6ZVH6 145 aa11.94□□□□□ -0.5
VTI1B-201ENST00000216456 COPS9Q8WXC6 57 aa11.93□□□□□ -0.5
VTI1B-201ENST00000216456 TRAV13-2A0A0B4J235 113 aa11.9□□□□□ -0.5
VTI1B-201ENST00000216456 Q5XG85 94 aa11.9□□□□□ -0.5
VTI1B-201ENST00000216456 MT1HP80294 61 aa11.89□□□□□ -0.51
VTI1B-201ENST00000216456 HIST3H2BBQ8N257 126 aa11.87□□□□□ -0.51
VTI1B-201ENST00000216456 A4D1N5 150 aa11.86□□□□□ -0.51
VTI1B-201ENST00000216456 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
VTI1B-201ENST00000216456 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
VTI1B-201ENST00000216456 LINC00575Q6W349 94 aa11.83□□□□□ -0.52
VTI1B-201ENST00000216456 NHP2Q9NX24 153 aaKnown RBP11.83□□□□□ -0.52
VTI1B-201ENST00000216456 SNRPEP62304 92 aaKnown RBP11.81□□□□□ -0.52
VTI1B-201ENST00000216456 Q6ZQY7 126 aa11.81□□□□□ -0.52
VTI1B-201ENST00000216456 C12orf57Q99622 126 aa11.81□□□□□ -0.52
VTI1B-201ENST00000216456 FSIP2Q5CZC0 6907 aa11.8□□□□□ -0.52
VTI1B-201ENST00000216456 RPL37P61927 97 aaKnown RBP11.8□□□□□ -0.52
VTI1B-201ENST00000216456 S100A2P29034 98 aa11.77□□□□□ -0.53
VTI1B-201ENST00000216456 hADV29S1A0JD25 119 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms