RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SERTAD4-AS1Q5TG53 156 aa9.2□□□□□ -0.94
USH1C-201ENST00000005226 BCE1O60756 84 aa9.19□□□□□ -0.94
USH1C-201ENST00000005226 NREPQ16612 68 aa9.19□□□□□ -0.94
USH1C-201ENST00000005226 F8P00451 2351 aa9.18□□□□□ -0.94
USH1C-201ENST00000005226 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
USH1C-201ENST00000005226 C1orf43Q9BWL3 253 aa9.18□□□□□ -0.94
USH1C-201ENST00000005226 J3QKU1 62 aa9.17□□□□□ -0.94
USH1C-201ENST00000005226 SERP1Q9Y6X1 66 aa9.17□□□□□ -0.94
USH1C-201ENST00000005226 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
USH1C-201ENST00000005226 C7orf33Q8WU49 177 aa9.16□□□□□ -0.94
USH1C-201ENST00000005226 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
USH1C-201ENST00000005226 Q8N377 158 aa9.16□□□□□ -0.94
USH1C-201ENST00000005226 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
USH1C-201ENST00000005226 SYCNQ0VAF6 134 aa9.15□□□□□ -0.94
USH1C-201ENST00000005226 BAHCC1Q9P281 2608 aa9.15□□□□□ -0.94
USH1C-201ENST00000005226 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
USH1C-201ENST00000005226 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
USH1C-201ENST00000005226 KRTAP10-11P60412 298 aa9.14□□□□□ -0.95
USH1C-201ENST00000005226 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
USH1C-201ENST00000005226 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
USH1C-201ENST00000005226 MAST4O15021 2626 aa9.13□□□□□ -0.95
USH1C-201ENST00000005226 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
USH1C-201ENST00000005226 FP248Q71RG6 208 aaPredicted RBP9.12□□□□□ -0.95
USH1C-201ENST00000005226 ANK2Q01484 3957 aa9.12□□□□□ -0.95
USH1C-201ENST00000005226 CASC10Q5T4H9 136 aa9.11□□□□□ -0.95
USH1C-201ENST00000005226 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
USH1C-201ENST00000005226 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
USH1C-201ENST00000005226 STAB1Q9NY15 2570 aa9.1□□□□□ -0.95
USH1C-201ENST00000005226 Q9BRP9 147 aa9.09□□□□□ -0.95
USH1C-201ENST00000005226 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
USH1C-201ENST00000005226 DEFB131BA0A096LNP1 70 aa9.09□□□□□ -0.95
USH1C-201ENST00000005226 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
USH1C-201ENST00000005226 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
USH1C-201ENST00000005226 FAM30AQ9NZY2 134 aa9.08□□□□□ -0.96
USH1C-201ENST00000005226 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
USH1C-201ENST00000005226 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
USH1C-201ENST00000005226 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
USH1C-201ENST00000005226 H3BNG1 76 aa9.07□□□□□ -0.96
USH1C-201ENST00000005226 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
USH1C-201ENST00000005226 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
USH1C-201ENST00000005226 FBN1P35555 2871 aaKnown RBP9.06□□□□□ -0.96
USH1C-201ENST00000005226 ERC2-IT1O76042 136 aa9.06□□□□□ -0.96
USH1C-201ENST00000005226 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
USH1C-201ENST00000005226 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
USH1C-201ENST00000005226 IGLV5-48A0A075B6I7 105 aa9.05□□□□□ -0.96
USH1C-201ENST00000005226 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
USH1C-201ENST00000005226 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
USH1C-201ENST00000005226 NDUFC1O43677 76 aa9.04□□□□□ -0.96
USH1C-201ENST00000005226 Q6ZRX8 168 aa9.04□□□□□ -0.96
USH1C-201ENST00000005226 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
USH1C-201ENST00000005226 PRYO14603 147 aa9.03□□□□□ -0.96
USH1C-201ENST00000005226 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
USH1C-201ENST00000005226 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
USH1C-201ENST00000005226 KMT2BQ9UMN6 2715 aaPredicted RBP9.03□□□□□ -0.96
USH1C-201ENST00000005226 WIPF1O43516 503 aa9.03□□□□□ -0.96
USH1C-201ENST00000005226 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
USH1C-201ENST00000005226 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
USH1C-201ENST00000005226 MPLKIPQ8TAP9 179 aa9.02□□□□□ -0.97
USH1C-201ENST00000005226 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
USH1C-201ENST00000005226 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
USH1C-201ENST00000005226 UBE2BP63146 152 aa9□□□□□ -0.97
USH1C-201ENST00000005226 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
USH1C-201ENST00000005226 PRB2P02812 416 aaPredicted RBP8.99□□□□□ -0.97
USH1C-201ENST00000005226 TNP2Q05952 138 aa8.98□□□□□ -0.97
USH1C-201ENST00000005226 LINC00588Q9Y4M8 146 aa8.98□□□□□ -0.97
USH1C-201ENST00000005226 COL6A5A8TX70 2615 aa8.98□□□□□ -0.97
USH1C-201ENST00000005226 SRRM2Q9UQ35 2752 aaKnown RBP8.98□□□□□ -0.97
USH1C-201ENST00000005226 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
USH1C-201ENST00000005226 K7EQZ3 153 aa8.97□□□□□ -0.97
USH1C-201ENST00000005226 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
USH1C-201ENST00000005226 DSCR10P59022 87 aa8.97□□□□□ -0.97
USH1C-201ENST00000005226 Q8NBF4 154 aa8.97□□□□□ -0.97
USH1C-201ENST00000005226 MRAPQ8TCY5 172 aa8.96□□□□□ -0.97
USH1C-201ENST00000005226 SPRR1AP35321 89 aa8.96□□□□□ -0.98
USH1C-201ENST00000005226 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
USH1C-201ENST00000005226 MRPL55Q7Z7F7 128 aaKnown RBP8.95□□□□□ -0.98
USH1C-201ENST00000005226 F8WDY8 70 aa8.95□□□□□ -0.98
USH1C-201ENST00000005226 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
USH1C-201ENST00000005226 NBEAL1Q6ZS30 2694 aa8.94□□□□□ -0.98
USH1C-201ENST00000005226 PLA2G2DQ9UNK4 145 aa8.94□□□□□ -0.98
USH1C-201ENST00000005226 PRR4Q16378 134 aa8.92□□□□□ -0.98
USH1C-201ENST00000005226 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
USH1C-201ENST00000005226 PRLHP81277 87 aa8.91□□□□□ -0.98
USH1C-201ENST00000005226 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
USH1C-201ENST00000005226 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
USH1C-201ENST00000005226 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
USH1C-201ENST00000005226 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
USH1C-201ENST00000005226 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
USH1C-201ENST00000005226 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
USH1C-201ENST00000005226 REG3GQ6UW15 175 aa8.89□□□□□ -0.99
USH1C-201ENST00000005226 DNAH10Q8IVF4 4471 aa8.89□□□□□ -0.99
USH1C-201ENST00000005226 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
USH1C-201ENST00000005226 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
USH1C-201ENST00000005226 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
USH1C-201ENST00000005226 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
USH1C-201ENST00000005226 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
USH1C-201ENST00000005226 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
USH1C-201ENST00000005226 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
USH1C-201ENST00000005226 PSCAO43653 123 aa8.87□□□□□ -0.99
USH1C-201ENST00000005226 KRTAP24-1Q3LI83 254 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms