RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TSTD3H0UI37 97 aa6.34□□□□□ -1.39
PHGDH-222ENST00000641587 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
PHGDH-222ENST00000641587 A0A0U1RRA0 63 aa6.33□□□□□ -1.4
PHGDH-222ENST00000641587 PFN2P35080 140 aa6.33□□□□□ -1.4
PHGDH-222ENST00000641587 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
PHGDH-222ENST00000641587 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
PHGDH-222ENST00000641587 UQCR10Q9UDW1 63 aa6.33□□□□□ -1.4
PHGDH-222ENST00000641587 A0A087WYN8 130 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 A0A0J9YXY3 114 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 DLEU1O43261 78 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 LINC00158P58513 81 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
PHGDH-222ENST00000641587 C6orf48Q9UBA6 75 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 ERG28Q9UKR5 140 aa6.32□□□□□ -1.4
PHGDH-222ENST00000641587 LINC00587B1AMM8 73 aa6.31□□□□□ -1.4
PHGDH-222ENST00000641587 SLPIP03973 132 aa6.31□□□□□ -1.4
PHGDH-222ENST00000641587 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
PHGDH-222ENST00000641587 C9orf116Q5BN46 136 aaPredicted RBP6.31□□□□□ -1.4
PHGDH-222ENST00000641587 LPAP08519 4548 aa6.31□□□□□ -1.4
PHGDH-222ENST00000641587 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
PHGDH-222ENST00000641587 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
PHGDH-222ENST00000641587 SPACA4Q8TDM5 124 aa6.3□□□□□ -1.4
PHGDH-222ENST00000641587 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
PHGDH-222ENST00000641587 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
PHGDH-222ENST00000641587 DAND5Q8N907 189 aa6.29□□□□□ -1.4
PHGDH-222ENST00000641587 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
PHGDH-222ENST00000641587 TIMM17BO60830 172 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 NPC2P61916 151 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
PHGDH-222ENST00000641587 COX17Q14061 63 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 MIR7-3HGQ8N6C7 128 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 HIST1H4GQ99525 98 aa6.28□□□□□ -1.4
PHGDH-222ENST00000641587 LOC107984640A0A0U1RRK4 108 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 GAGE2BQ13066 116 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 LINC01600Q96MT4 127 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 LITAFQ99732 161 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 HIGD1BQ9P298 99 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
PHGDH-222ENST00000641587 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
PHGDH-222ENST00000641587 ADAMTSL4-AS1Q5T5F5 129 aa6.26□□□□□ -1.41
PHGDH-222ENST00000641587 SPANXDQ9BXN6 97 aa6.26□□□□□ -1.41
PHGDH-222ENST00000641587 SPANXB1Q9NS25 103 aaPredicted RBP6.26□□□□□ -1.41
PHGDH-222ENST00000641587 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
PHGDH-222ENST00000641587 DDTP30046 118 aa6.25□□□□□ -1.41
PHGDH-222ENST00000641587 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
PHGDH-222ENST00000641587 HSD52Q0P140 79 aa6.25□□□□□ -1.41
PHGDH-222ENST00000641587 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
PHGDH-222ENST00000641587 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
PHGDH-222ENST00000641587 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 Q6ZRP5 223 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 Q6ZVH6 145 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 C7orf33Q8WU49 177 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
PHGDH-222ENST00000641587 A0A096LNI7 61 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 IFITM1P13164 125 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 CTAG1AP78358 180 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 TAL2Q16559 108 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 MUSTN1Q8IVN3 82 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
PHGDH-222ENST00000641587 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
PHGDH-222ENST00000641587 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
PHGDH-222ENST00000641587 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
PHGDH-222ENST00000641587 M0R143 59 aa6.21□□□□□ -1.42
PHGDH-222ENST00000641587 HINT1P49773 126 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-222ENST00000641587 RPL24P83731 157 aaKnown RBP6.21□□□□□ -1.42
PHGDH-222ENST00000641587 CEND1Q8N111 149 aa6.21□□□□□ -1.42
PHGDH-222ENST00000641587 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
PHGDH-222ENST00000641587 A6NJY4 79 aa6.2□□□□□ -1.42
PHGDH-222ENST00000641587 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
PHGDH-222ENST00000641587 BATFQ16520 125 aa6.2□□□□□ -1.42
PHGDH-222ENST00000641587 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
PHGDH-222ENST00000641587 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
PHGDH-222ENST00000641587 A4D1N5 150 aa6.19□□□□□ -1.42
PHGDH-222ENST00000641587 FXYD2P54710 66 aa6.19□□□□□ -1.42
PHGDH-222ENST00000641587 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
PHGDH-222ENST00000641587 NCR3O14931 201 aa6.18□□□□□ -1.42
PHGDH-222ENST00000641587 BVES-AS1Q5T3Y7 98 aa6.18□□□□□ -1.42
PHGDH-222ENST00000641587 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
PHGDH-222ENST00000641587 LOC107984156A0A0G2JMH3 177 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 REG3GQ6UW15 175 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 SPINK6Q6UWN8 80 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 ARL17AQ8IVW1 177 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
PHGDH-222ENST00000641587 NDUFC2O95298 119 aa6.16□□□□□ -1.42
PHGDH-222ENST00000641587 VPREB1P12018 145 aa6.16□□□□□ -1.42
PHGDH-222ENST00000641587 Q8NDZ9 215 aa6.16□□□□□ -1.42
PHGDH-222ENST00000641587 OR13C6PQ8NH95 151 aa6.16□□□□□ -1.42
PHGDH-222ENST00000641587 RAB37Q96AX2 223 aa6.16□□□□□ -1.42
PHGDH-222ENST00000641587 NHP2Q9NX24 153 aaKnown RBP6.16□□□□□ -1.42
PHGDH-222ENST00000641587 A6NDN8 102 aa6.15□□□□□ -1.42
PHGDH-222ENST00000641587 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms