RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 S100A7L2Q5SY68 101 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
PHGDH-211ENST00000641213 NOTCH1P46531 2555 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 HIGD2BQ4VC39 106 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
PHGDH-211ENST00000641213 A0A1B0GX51 115 aa11.38□□□□□ -0.59
PHGDH-211ENST00000641213 PRB2P02812 416 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-211ENST00000641213 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
PHGDH-211ENST00000641213 Q8N814 137 aa11.37□□□□□ -0.59
PHGDH-211ENST00000641213 OBSCN-AS1Q96MR7 158 aa11.37□□□□□ -0.59
PHGDH-211ENST00000641213 C6orf99Q4VX62 202 aa11.37□□□□□ -0.59
PHGDH-211ENST00000641213 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
PHGDH-211ENST00000641213 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
PHGDH-211ENST00000641213 A0A1B0GV72 72 aa11.36□□□□□ -0.59
PHGDH-211ENST00000641213 CAMK2N2Q96S95 79 aa11.36□□□□□ -0.59
PHGDH-211ENST00000641213 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
PHGDH-211ENST00000641213 Q6Q795 121 aa11.36□□□□□ -0.59
PHGDH-211ENST00000641213 IGLV6-57P01721 117 aa11.35□□□□□ -0.59
PHGDH-211ENST00000641213 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
PHGDH-211ENST00000641213 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
PHGDH-211ENST00000641213 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
PHGDH-211ENST00000641213 SMCR5Q8TEV8 140 aa11.34□□□□□ -0.59
PHGDH-211ENST00000641213 C14orf132Q9NPU4 83 aa11.34□□□□□ -0.59
PHGDH-211ENST00000641213 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
PHGDH-211ENST00000641213 IGKV2D-24A0A075B6R9 120 aa11.32□□□□□ -0.6
PHGDH-211ENST00000641213 Q6ZRU5 148 aa11.32□□□□□ -0.6
PHGDH-211ENST00000641213 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
PHGDH-211ENST00000641213 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
PHGDH-211ENST00000641213 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
PHGDH-211ENST00000641213 K7EIL1 84 aa11.31□□□□□ -0.6
PHGDH-211ENST00000641213 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
PHGDH-211ENST00000641213 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
PHGDH-211ENST00000641213 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
PHGDH-211ENST00000641213 TRBV10-3A0A0K0K1G6 114 aa11.29□□□□□ -0.6
PHGDH-211ENST00000641213 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
PHGDH-211ENST00000641213 TRBV7-7A0A0K0K1E9 115 aa11.29□□□□□ -0.6
PHGDH-211ENST00000641213 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
PHGDH-211ENST00000641213 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
PHGDH-211ENST00000641213 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
PHGDH-211ENST00000641213 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
PHGDH-211ENST00000641213 NDUFV3P56181 108 aaKnown RBP11.27□□□□□ -0.61
PHGDH-211ENST00000641213 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
PHGDH-211ENST00000641213 hADV29S1A0JD25 119 aa11.26□□□□□ -0.61
PHGDH-211ENST00000641213 VPREB1P12018 145 aa11.26□□□□□ -0.61
PHGDH-211ENST00000641213 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
PHGDH-211ENST00000641213 F8WDY8 70 aa11.26□□□□□ -0.61
PHGDH-211ENST00000641213 NHLRC4P0CG21 123 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-211ENST00000641213 HUWE1Q7Z6Z7 4374 aaKnown RBP11.24□□□□□ -0.61
PHGDH-211ENST00000641213 JMJD7-PLA2G4BH0Y9G9 81 aa11.24□□□□□ -0.61
PHGDH-211ENST00000641213 SYCNQ0VAF6 134 aa11.23□□□□□ -0.61
PHGDH-211ENST00000641213 Q6ZRP5 223 aa11.23□□□□□ -0.61
PHGDH-211ENST00000641213 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
PHGDH-211ENST00000641213 IMUPQ9GZP8 106 aa11.23□□□□□ -0.61
PHGDH-211ENST00000641213 M0R378 163 aa11.22□□□□□ -0.61
PHGDH-211ENST00000641213 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-211ENST00000641213 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
PHGDH-211ENST00000641213 CCKP06307 115 aa11.21□□□□□ -0.62
PHGDH-211ENST00000641213 LINC00846Q9NV44 126 aa11.2□□□□□ -0.62
PHGDH-211ENST00000641213 COX7BP24311 80 aa11.18□□□□□ -0.62
PHGDH-211ENST00000641213 ELOF1P60002 83 aaKnown RBP11.18□□□□□ -0.62
PHGDH-211ENST00000641213 Q6ZQY7 126 aa11.18□□□□□ -0.62
PHGDH-211ENST00000641213 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
PHGDH-211ENST00000641213 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
PHGDH-211ENST00000641213 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
PHGDH-211ENST00000641213 UPK3BQ9BT76 320 aa11.15□□□□□ -0.63
PHGDH-211ENST00000641213 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
PHGDH-211ENST00000641213 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
PHGDH-211ENST00000641213 TLX1NBP0CAT3 122 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 LAMTOR3Q9UHA4 124 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 FAM236AA0A1B0GUQ0 79 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 FAM236BA0A1B0GV22 79 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 H3BQ85 93 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 RBM3P98179 157 aaKnown RBP11.13□□□□□ -0.63
PHGDH-211ENST00000641213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-211ENST00000641213 RMI2Q96E14 147 aa11.13□□□□□ -0.63
PHGDH-211ENST00000641213 Q6JHZ5 121 aa11.12□□□□□ -0.63
PHGDH-211ENST00000641213 SERTAD4-AS1Q5TG53 156 aa11.12□□□□□ -0.63
PHGDH-211ENST00000641213 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
PHGDH-211ENST00000641213 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
PHGDH-211ENST00000641213 Q6ZQT0 140 aa11.1□□□□□ -0.63
PHGDH-211ENST00000641213 NKAPP1Q8N9T2 125 aa11.1□□□□□ -0.63
PHGDH-211ENST00000641213 LOC110117498A0A087WWA1 95 aa11.1□□□□□ -0.63
PHGDH-211ENST00000641213 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
PHGDH-211ENST00000641213 C7orf33Q8WU49 177 aa11.08□□□□□ -0.63
PHGDH-211ENST00000641213 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
PHGDH-211ENST00000641213 CCDC179H3BU77 68 aa11.07□□□□□ -0.64
PHGDH-211ENST00000641213 KCNQ1DNQ9H478 68 aa11.07□□□□□ -0.64
PHGDH-211ENST00000641213 GHRHP01286 108 aa11.06□□□□□ -0.64
PHGDH-211ENST00000641213 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
PHGDH-211ENST00000641213 MDFIQ99750 246 aa11.05□□□□□ -0.64
PHGDH-211ENST00000641213 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
PHGDH-211ENST00000641213 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
PHGDH-211ENST00000641213 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
PHGDH-211ENST00000641213 M0R2N4 97 aa11.03□□□□□ -0.64
PHGDH-211ENST00000641213 DNAH9Q9NYC9 4486 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms