RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 C14orf144Q96I85 54 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 SND1-IT1Q9HBX3 110 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 FAM30AQ9NZY2 134 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 TP73-AS1Q9UF72 201 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
SCARB2-225ENST00000640900 PFN2P35080 140 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 SLC25A34Q6PIV7 304 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 C12orf57Q99622 126 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 SPANXDQ9BXN6 97 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
SCARB2-225ENST00000640900 SPANXCQ9NY87 97 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 PLA2G2DQ9UNK4 145 aa5.78□□□□□ -1.48
SCARB2-225ENST00000640900 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 LINC00158P58513 81 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 Q6ZVH6 145 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 PLAC8Q9NZF1 115 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 RYR1P21817 5038 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.49
SCARB2-225ENST00000640900 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
SCARB2-225ENST00000640900 RPL18AQ02543 176 aaKnown RBP5.76□□□□□ -1.49
SCARB2-225ENST00000640900 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
SCARB2-225ENST00000640900 Q8NDZ9 215 aa5.76□□□□□ -1.49
SCARB2-225ENST00000640900 BIRC6Q9NR09 4857 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 TMEM238C9JI98 176 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 IFITM1P13164 125 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 XGP55808 180 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 GAGE2BQ13066 116 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 SCGB1D4Q6XE38 83 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 DAND5Q8N907 189 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 LINC00308Q8TCZ7 52 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 MIEN1Q9BRT3 115 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 UQCR10Q9UDW1 63 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
SCARB2-225ENST00000640900 A0A087WYN8 130 aa5.74□□□□□ -1.49
SCARB2-225ENST00000640900 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
SCARB2-225ENST00000640900 VPREB1P12018 145 aa5.74□□□□□ -1.49
SCARB2-225ENST00000640900 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
SCARB2-225ENST00000640900 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
SCARB2-225ENST00000640900 IGKV2-24A0A0C4DH68 120 aa5.73□□□□□ -1.49
SCARB2-225ENST00000640900 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
SCARB2-225ENST00000640900 NDUFC2O95298 119 aa5.73□□□□□ -1.49
SCARB2-225ENST00000640900 CDK2AP2O75956 126 aa5.72□□□□□ -1.49
SCARB2-225ENST00000640900 TAL2Q16559 108 aa5.72□□□□□ -1.49
SCARB2-225ENST00000640900 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
SCARB2-225ENST00000640900 CIRBP-AS1Q8TBR5 109 aa5.72□□□□□ -1.49
SCARB2-225ENST00000640900 PRO1933Q9H354 126 aa5.72□□□□□ -1.49
SCARB2-225ENST00000640900 TRBV10-2A0A0K0K1G8 114 aa5.71□□□□□ -1.5
SCARB2-225ENST00000640900 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
SCARB2-225ENST00000640900 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
SCARB2-225ENST00000640900 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
SCARB2-225ENST00000640900 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
SCARB2-225ENST00000640900 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
SCARB2-225ENST00000640900 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
SCARB2-225ENST00000640900 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
SCARB2-225ENST00000640900 TSTD3H0UI37 97 aa5.69□□□□□ -1.5
SCARB2-225ENST00000640900 HSD52Q0P140 79 aa5.69□□□□□ -1.5
SCARB2-225ENST00000640900 SRSF9Q13242 221 aaKnown RBP eCLIP5.69□□□□□ -1.5
SCARB2-225ENST00000640900 M0R378 163 aa5.68□□□□□ -1.5
SCARB2-225ENST00000640900 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
SCARB2-225ENST00000640900 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
SCARB2-225ENST00000640900 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
SCARB2-225ENST00000640900 KRTAP11-1Q8IUC1 163 aa5.68□□□□□ -1.5
SCARB2-225ENST00000640900 CEND1Q8N111 149 aa5.68□□□□□ -1.5
SCARB2-225ENST00000640900 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
SCARB2-225ENST00000640900 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
SCARB2-225ENST00000640900 HERC2O95714 4834 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 A4D1N5 150 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 M0QXV9 152 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 NPC2P61916 151 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
SCARB2-225ENST00000640900 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
SCARB2-225ENST00000640900 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
SCARB2-225ENST00000640900 A0A1B0GWB2 263 aa5.66□□□□□ -1.5
SCARB2-225ENST00000640900 FXYD2P54710 66 aa5.66□□□□□ -1.5
SCARB2-225ENST00000640900 LBHQ53QV2 105 aaPredicted RBP5.66□□□□□ -1.5
SCARB2-225ENST00000640900 DPH3Q96FX2 82 aa5.66□□□□□ -1.5
SCARB2-225ENST00000640900 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
SCARB2-225ENST00000640900 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 CFC1P0CG37 223 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 DDTP30046 118 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.5
SCARB2-225ENST00000640900 CTAG1AP78358 180 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 HAMPP81172 84 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 KCNQ1DNQ9H478 68 aa5.65□□□□□ -1.5
SCARB2-225ENST00000640900 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
SCARB2-225ENST00000640900 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
SCARB2-225ENST00000640900 KRTAP4-16G5E9R7 235 aaPredicted RBP5.64□□□□□ -1.51
SCARB2-225ENST00000640900 SPRR1AP35321 89 aa5.64□□□□□ -1.51
SCARB2-225ENST00000640900 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms