RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
GFAP-238ENST00000640859 J3QR89 54 aa7.52□□□□□ -1.21
GFAP-238ENST00000640859 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
GFAP-238ENST00000640859 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
GFAP-238ENST00000640859 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
GFAP-238ENST00000640859 NDUFC2O95298 119 aa7.51□□□□□ -1.21
GFAP-238ENST00000640859 DNAH10OSP0CZ25 163 aa7.51□□□□□ -1.21
GFAP-238ENST00000640859 CASC10Q5T4H9 136 aa7.51□□□□□ -1.21
GFAP-238ENST00000640859 SMIM11BQ8TCY0 68 aa7.51□□□□□ -1.21
GFAP-238ENST00000640859 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
GFAP-238ENST00000640859 H3BT86 120 aa7.5□□□□□ -1.21
GFAP-238ENST00000640859 LINC00588Q9Y4M8 146 aa7.5□□□□□ -1.21
GFAP-238ENST00000640859 TRACP01848 142 aa7.49□□□□□ -1.21
GFAP-238ENST00000640859 C6orf48Q9UBA6 75 aa7.49□□□□□ -1.21
GFAP-238ENST00000640859 C15orf56Q8N910 161 aa7.48□□□□□ -1.21
GFAP-238ENST00000640859 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
GFAP-238ENST00000640859 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
GFAP-238ENST00000640859 DNAH9Q9NYC9 4486 aa7.48□□□□□ -1.21
GFAP-238ENST00000640859 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
GFAP-238ENST00000640859 Q8NDZ9 215 aa7.47□□□□□ -1.21
GFAP-238ENST00000640859 OR13C6PQ8NH95 151 aa7.47□□□□□ -1.21
GFAP-238ENST00000640859 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
GFAP-238ENST00000640859 F8WDY8 70 aa7.46□□□□□ -1.22
GFAP-238ENST00000640859 H0YGX0 51 aa7.46□□□□□ -1.22
GFAP-238ENST00000640859 ZNF561-AS1K7EIQ3 104 aa7.46□□□□□ -1.22
GFAP-238ENST00000640859 HIGD2BQ4VC39 106 aa7.46□□□□□ -1.22
GFAP-238ENST00000640859 IGKV2D-24A0A075B6R9 120 aa7.45□□□□□ -1.22
GFAP-238ENST00000640859 CAMK2N2Q96S95 79 aa7.45□□□□□ -1.22
GFAP-238ENST00000640859 UPK3BQ9BT76 320 aa7.45□□□□□ -1.22
GFAP-238ENST00000640859 BAALC-AS2P0C853 105 aa7.43□□□□□ -1.22
GFAP-238ENST00000640859 Q6ZRU5 148 aa7.43□□□□□ -1.22
GFAP-238ENST00000640859 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
GFAP-238ENST00000640859 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
GFAP-238ENST00000640859 A0A087WYN8 130 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 NCR3O14931 201 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 Q9HAA7 133 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 C22orf24Q9Y442 160 aa7.42□□□□□ -1.22
GFAP-238ENST00000640859 LY6G6CO95867 125 aa7.4□□□□□ -1.22
GFAP-238ENST00000640859 A0A1B0GX51 115 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 RMI2Q96E14 147 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 XAGE1AQ9HD64 81 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 APLNQ9ULZ1 77 aa7.39□□□□□ -1.23
GFAP-238ENST00000640859 LECT2O14960 151 aa7.38□□□□□ -1.23
GFAP-238ENST00000640859 S100A7L2Q5SY68 101 aa7.38□□□□□ -1.23
GFAP-238ENST00000640859 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
GFAP-238ENST00000640859 VPREB1P12018 145 aa7.37□□□□□ -1.23
GFAP-238ENST00000640859 RPL18AQ02543 176 aaKnown RBP7.37□□□□□ -1.23
GFAP-238ENST00000640859 LCE6AA0A183 80 aa7.36□□□□□ -1.23
GFAP-238ENST00000640859 USP17L23D6RBM5 183 aa7.36□□□□□ -1.23
GFAP-238ENST00000640859 DNAL4O96015 105 aa7.36□□□□□ -1.23
GFAP-238ENST00000640859 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
GFAP-238ENST00000640859 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
GFAP-238ENST00000640859 TRBV10-3A0A0K0K1G6 114 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 H3BS24 57 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 SLPIP03973 132 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 TLX1NBP0CAT3 122 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 Q6ZRP5 223 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 Q8N814 137 aa7.35□□□□□ -1.23
GFAP-238ENST00000640859 M0R378 163 aa7.34□□□□□ -1.23
GFAP-238ENST00000640859 GAGE2EQ4V326 116 aa7.34□□□□□ -1.23
GFAP-238ENST00000640859 LINC00575Q6W349 94 aa7.34□□□□□ -1.23
GFAP-238ENST00000640859 GAGE2DQ9UEU5 116 aa7.34□□□□□ -1.23
GFAP-238ENST00000640859 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
GFAP-238ENST00000640859 PCP4P48539 62 aa7.33□□□□□ -1.24
GFAP-238ENST00000640859 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
GFAP-238ENST00000640859 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
GFAP-238ENST00000640859 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
GFAP-238ENST00000640859 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
GFAP-238ENST00000640859 KRTAP1-5Q9BYS1 174 aa7.32□□□□□ -1.24
GFAP-238ENST00000640859 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
GFAP-238ENST00000640859 TRAV23DV6A0A075B6W5 121 aa7.31□□□□□ -1.24
GFAP-238ENST00000640859 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
GFAP-238ENST00000640859 XGP55808 180 aa7.31□□□□□ -1.24
GFAP-238ENST00000640859 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
GFAP-238ENST00000640859 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 SNCGO76070 127 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 INAFM2P0DMQ5 153 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 TTC32Q5I0X7 151 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 DIRC1Q969H9 104 aa7.3□□□□□ -1.24
GFAP-238ENST00000640859 hADV29S1A0JD25 119 aa7.29□□□□□ -1.24
GFAP-238ENST00000640859 ZNF73O43830 326 aaPredicted RBP7.29□□□□□ -1.24
GFAP-238ENST00000640859 DNAH7Q8WXX0 4024 aa7.29□□□□□ -1.24
GFAP-238ENST00000640859 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
GFAP-238ENST00000640859 ACYP1P07311 99 aa7.28□□□□□ -1.24
GFAP-238ENST00000640859 COX7BP24311 80 aa7.28□□□□□ -1.24
GFAP-238ENST00000640859 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
GFAP-238ENST00000640859 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
GFAP-238ENST00000640859 TMEM256-PLSCR3K7ERE1 68 aa7.27□□□□□ -1.25
GFAP-238ENST00000640859 LOC107984640A0A0U1RRK4 108 aa7.26□□□□□ -1.25
GFAP-238ENST00000640859 ELOF1P60002 83 aaKnown RBP7.26□□□□□ -1.25
GFAP-238ENST00000640859 C7orf33Q8WU49 177 aa7.26□□□□□ -1.25
GFAP-238ENST00000640859 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms