RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 FAT2Q9NYQ8 4349 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 IGKV2-29A2NJV5 120 aaPredicted RBP4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 ATP5G1P05496 136 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 PFN2P35080 140 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 MRPS36P82909 103 aaKnown RBP4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 PIK3CD-AS1Q5SR53 167 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 LINC00308Q8TCZ7 52 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 DNAH10Q8IVF4 4471 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 DEFB4AO15263 64 aa4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 NANOS2P60321 138 aaKnown RBP4.05□□□□□ -1.76
PRICKLE1-220ENST00000640840 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 HTN1P15515 57 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 COX6A2Q02221 97 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 Q6ZRU5 148 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 LINC00528Q8N1L1 170 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 C16orf74Q96GX8 76 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 TRBV6-5A0A0K0K1A5 114 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 J3QL48 77 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 NUPR2A6NF83 97 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
PRICKLE1-220ENST00000640840 TRAV23DV6A0A075B6W5 121 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 A0A087WYN8 130 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 NCR3O14931 201 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 NDUFC2O95298 119 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 SLPIP03973 132 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 Q6ZTC4 211 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 LCE6AA0A183 80 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 RPL28P46779 137 aaKnown RBP4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 C20orf197Q8N268 126 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
PRICKLE1-220ENST00000640840 MED14OSP0DP75 135 aa4.03□□□□□ -1.77
PRICKLE1-220ENST00000640840 FAM222AQ5U5X8 452 aa4.03□□□□□ -1.77
PRICKLE1-220ENST00000640840 PKD1P98161 4303 aa4.02□□□□□ -1.77
PRICKLE1-220ENST00000640840 DNAL4O96015 105 aa4.02□□□□□ -1.77
PRICKLE1-220ENST00000640840 SPART-AS1P0CW21 52 aa4.02□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
PRICKLE1-220ENST00000640840 Q6ZSN1 163 aa4.02□□□□□ -1.77
PRICKLE1-220ENST00000640840 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 A0A0U1RQV1 116 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGHV1OR15-1A0A075B7D0 117 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGHV3OR16-12A0A075B7B8 117 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 LINC00474Q9P2X8 69 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 UBE2D4Q9Y2X8 147 aa4.01□□□□□ -1.77
PRICKLE1-220ENST00000640840 INAFM2P0DMQ5 153 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 LINC00337Q8N6G1 96 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 TMEM243Q9BU79 118 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 MRPL55Q7Z7F7 128 aaKnown RBP4□□□□□ -1.77
PRICKLE1-220ENST00000640840 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 CHCHD7Q9BUK0 85 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 EPPK1P58107 5090 aaKnown RBP4□□□□□ -1.77
PRICKLE1-220ENST00000640840 NDUFA1O15239 70 aa4□□□□□ -1.77
PRICKLE1-220ENST00000640840 FP248Q71RG6 208 aaPredicted RBP4□□□□□ -1.77
PRICKLE1-220ENST00000640840 Q6JHZ5 121 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 ENHOQ6UWT2 76 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 PRR15Q8IV56 129 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 NOP10Q9NPE3 64 aaKnown RBP3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 H3BNG1 76 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 LECT2O14960 151 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
PRICKLE1-220ENST00000640840 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 TIMM17BO60830 172 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 XCL1P47992 114 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 Q6ZTI0 123 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 SMIM11BQ8TCY0 68 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 H7BZZ5 65 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 DAD1P61803 113 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 SS18Q15532 418 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 LINC00242Q5T6M2 205 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
PRICKLE1-220ENST00000640840 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
PRICKLE1-220ENST00000640840 RMI2Q96E14 147 aa3.97□□□□□ -1.77
PRICKLE1-220ENST00000640840 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
PRICKLE1-220ENST00000640840 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
PRICKLE1-220ENST00000640840 RPL36AP83881 106 aaKnown RBP3.96□□□□□ -1.77
PRICKLE1-220ENST00000640840 BRK1Q8WUW1 75 aa3.96□□□□□ -1.77
PRICKLE1-220ENST00000640840 RPL36ALQ969Q0 106 aaKnown RBP3.96□□□□□ -1.77
PRICKLE1-220ENST00000640840 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
PRICKLE1-220ENST00000640840 C8orf87E5RJ46 101 aa3.96□□□□□ -1.78
PRICKLE1-220ENST00000640840 DEFB130BP0DP73 79 aa3.96□□□□□ -1.78
PRICKLE1-220ENST00000640840 DEFB130AP0DP74 79 aa3.96□□□□□ -1.78
PRICKLE1-220ENST00000640840 CRPP02741 224 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 M0R2N4 97 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 TRGV1A0A0A0MS02 117 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 PAX4O43316 350 aa3.95□□□□□ -1.78
PRICKLE1-220ENST00000640840 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
PRICKLE1-220ENST00000640840 A0A096LPF7 62 aa3.94□□□□□ -1.78
PRICKLE1-220ENST00000640840 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms