RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 HERV-K104P63124 156 aa11.38□□□□□ -0.59
VPS72-207ENST00000640458 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
VPS72-207ENST00000640458 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
VPS72-207ENST00000640458 RPL18AQ02543 176 aaKnown RBP11.37□□□□□ -0.59
VPS72-207ENST00000640458 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
VPS72-207ENST00000640458 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
VPS72-207ENST00000640458 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
VPS72-207ENST00000640458 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
VPS72-207ENST00000640458 IGKV2D-26A0A0A0MRZ7 120 aa11.34□□□□□ -0.59
VPS72-207ENST00000640458 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
VPS72-207ENST00000640458 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
VPS72-207ENST00000640458 Q6ZRP5 223 aa11.33□□□□□ -0.6
VPS72-207ENST00000640458 TSPEAR-AS2P59090 65 aa11.32□□□□□ -0.6
VPS72-207ENST00000640458 MEIG1Q5JSS6 88 aa11.32□□□□□ -0.6
VPS72-207ENST00000640458 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
VPS72-207ENST00000640458 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
VPS72-207ENST00000640458 C12orf57Q99622 126 aa11.31□□□□□ -0.6
VPS72-207ENST00000640458 COX8AP10176 69 aa11.3□□□□□ -0.6
VPS72-207ENST00000640458 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
VPS72-207ENST00000640458 COX17Q14061 63 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 GAGE2EQ4V326 116 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 GAGE2DQ9UEU5 116 aa11.29□□□□□ -0.6
VPS72-207ENST00000640458 C14orf144Q96I85 54 aa11.28□□□□□ -0.6
VPS72-207ENST00000640458 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
VPS72-207ENST00000640458 DLEU1O43261 78 aa11.27□□□□□ -0.61
VPS72-207ENST00000640458 LINC00158P58513 81 aa11.27□□□□□ -0.61
VPS72-207ENST00000640458 LINC01600Q96MT4 127 aa11.27□□□□□ -0.61
VPS72-207ENST00000640458 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
VPS72-207ENST00000640458 A0A0J9YXY3 114 aa11.26□□□□□ -0.61
VPS72-207ENST00000640458 PFN2P35080 140 aa11.26□□□□□ -0.61
VPS72-207ENST00000640458 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
VPS72-207ENST00000640458 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
VPS72-207ENST00000640458 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
VPS72-207ENST00000640458 LINC00518Q8N0U6 118 aa11.25□□□□□ -0.61
VPS72-207ENST00000640458 TMEM238C9JI98 176 aa11.24□□□□□ -0.61
VPS72-207ENST00000640458 TIMM17BO60830 172 aa11.24□□□□□ -0.61
VPS72-207ENST00000640458 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
VPS72-207ENST00000640458 TSTD3H0UI37 97 aa11.23□□□□□ -0.61
VPS72-207ENST00000640458 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
VPS72-207ENST00000640458 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
VPS72-207ENST00000640458 A0A0U1RRA0 63 aa11.22□□□□□ -0.61
VPS72-207ENST00000640458 KRTAP7-1Q8IUC3 87 aa11.22□□□□□ -0.61
VPS72-207ENST00000640458 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
VPS72-207ENST00000640458 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
VPS72-207ENST00000640458 Q6ZVH6 145 aa11.2□□□□□ -0.62
VPS72-207ENST00000640458 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
VPS72-207ENST00000640458 KRTAP9-2Q9BYQ4 174 aa11.2□□□□□ -0.62
VPS72-207ENST00000640458 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
VPS72-207ENST00000640458 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS72-207ENST00000640458 PRO1933Q9H354 126 aa11.19□□□□□ -0.62
VPS72-207ENST00000640458 SPINK6Q6UWN8 80 aa11.18□□□□□ -0.62
VPS72-207ENST00000640458 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
VPS72-207ENST00000640458 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
VPS72-207ENST00000640458 M0QXV9 152 aa11.17□□□□□ -0.62
VPS72-207ENST00000640458 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
VPS72-207ENST00000640458 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
VPS72-207ENST00000640458 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
VPS72-207ENST00000640458 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
VPS72-207ENST00000640458 SPANXCQ9NY87 97 aa11.16□□□□□ -0.62
VPS72-207ENST00000640458 IFITM1P13164 125 aa11.15□□□□□ -0.62
VPS72-207ENST00000640458 C1orf137Q5JT78 98 aa11.15□□□□□ -0.62
VPS72-207ENST00000640458 KRTAP11-1Q8IUC1 163 aa11.15□□□□□ -0.62
VPS72-207ENST00000640458 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
VPS72-207ENST00000640458 SND1-IT1Q9HBX3 110 aa11.14□□□□□ -0.63
VPS72-207ENST00000640458 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
VPS72-207ENST00000640458 DAND5Q8N907 189 aa11.13□□□□□ -0.63
VPS72-207ENST00000640458 LITAFQ99732 161 aa11.13□□□□□ -0.63
VPS72-207ENST00000640458 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
VPS72-207ENST00000640458 UBE2BP63146 152 aa11.12□□□□□ -0.63
VPS72-207ENST00000640458 TAL2Q16559 108 aa11.12□□□□□ -0.63
VPS72-207ENST00000640458 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
VPS72-207ENST00000640458 NPC2P61916 151 aa11.11□□□□□ -0.63
VPS72-207ENST00000640458 RPL24P83731 157 aaKnown RBP11.11□□□□□ -0.63
VPS72-207ENST00000640458 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
VPS72-207ENST00000640458 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
VPS72-207ENST00000640458 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
VPS72-207ENST00000640458 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
VPS72-207ENST00000640458 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
VPS72-207ENST00000640458 LPAP08519 4548 aa11.08□□□□□ -0.63
VPS72-207ENST00000640458 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
VPS72-207ENST00000640458 HSD52Q0P140 79 aa11.08□□□□□ -0.64
VPS72-207ENST00000640458 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
VPS72-207ENST00000640458 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
VPS72-207ENST00000640458 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
VPS72-207ENST00000640458 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
VPS72-207ENST00000640458 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
VPS72-207ENST00000640458 NKAPP1Q8N9T2 125 aa11.06□□□□□ -0.64
VPS72-207ENST00000640458 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
VPS72-207ENST00000640458 A6NJY4 79 aa11.05□□□□□ -0.64
VPS72-207ENST00000640458 NDUFC2O95298 119 aa11.05□□□□□ -0.64
VPS72-207ENST00000640458 KRTAP9-6A0A140TA67 174 aa11.04□□□□□ -0.64
VPS72-207ENST00000640458 CEND1Q8N111 149 aa11.04□□□□□ -0.64
VPS72-207ENST00000640458 DDTP30046 118 aa11.03□□□□□ -0.64
VPS72-207ENST00000640458 SOSTDC1Q6X4U4 206 aa11.03□□□□□ -0.64
VPS72-207ENST00000640458 DIRC1Q969H9 104 aa11.03□□□□□ -0.64
VPS72-207ENST00000640458 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
VPS72-207ENST00000640458 M0R143 59 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms