RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CRPP02741 224 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 ETV6P41212 452 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 DSCR8Q96T75 97 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 FXYD6Q9H0Q3 95 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 KLK12Q9UKR0 248 aa4.32□□□□□ -1.72
NECAP1-220ENST00000639841 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 COLCA2A8K830 154 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 IGLC1P0CG04 106 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 HTN3P15516 51 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 NACAE9PAV3 2078 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 TRAV1-1A0A0B4J248 108 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 IGHV1-24A0A0C4DH33 117 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 A0A0J9YX75 114 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 TMEM262E9PQX1 116 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 C17orf112F2Z3M2 114 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 DSCR10P59022 87 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
NECAP1-220ENST00000639841 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 R4GN34 69 aa4.31□□□□□ -1.72
NECAP1-220ENST00000639841 PKD1P98161 4303 aa4.3□□□□□ -1.72
NECAP1-220ENST00000639841 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
NECAP1-220ENST00000639841 SMIM31A0A1B0GVY4 71 aa4.3□□□□□ -1.72
NECAP1-220ENST00000639841 ZNF846Q147U1 533 aa4.3□□□□□ -1.72
NECAP1-220ENST00000639841 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
NECAP1-220ENST00000639841 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 ZNF345Q14585 488 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 OR2T35Q8NGX2 323 aa4.29□□□□□ -1.72
NECAP1-220ENST00000639841 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
NECAP1-220ENST00000639841 SSBP1Q04837 148 aaKnown RBP4.28□□□□□ -1.72
NECAP1-220ENST00000639841 NMSQ5H8A3 153 aa4.28□□□□□ -1.72
NECAP1-220ENST00000639841 LYPD1Q8N2G4 141 aa4.28□□□□□ -1.72
NECAP1-220ENST00000639841 LINC00052Q96N35 136 aa4.28□□□□□ -1.72
NECAP1-220ENST00000639841 TIMM8BQ9Y5J9 83 aaPredicted RBP4.28□□□□□ -1.72
NECAP1-220ENST00000639841 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.73
NECAP1-220ENST00000639841 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 CEBPZOSA8MTT3 80 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 SNRPGP15A8MWD9 76 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 P0C880 135 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 TMEM263Q8WUH6 116 aaKnown RBP4.27□□□□□ -1.73
NECAP1-220ENST00000639841 TRGV9Q99603 122 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 SCRT1Q9BWW7 348 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
NECAP1-220ENST00000639841 Q5VSD8 79 aa4.26□□□□□ -1.73
NECAP1-220ENST00000639841 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
NECAP1-220ENST00000639841 AQP10Q96PS8 301 aa4.26□□□□□ -1.73
NECAP1-220ENST00000639841 NPC2P61916 151 aa4.25□□□□□ -1.73
NECAP1-220ENST00000639841 TMEM242Q9NWH2 141 aa4.25□□□□□ -1.73
NECAP1-220ENST00000639841 HSPG2P98160 4391 aa4.25□□□□□ -1.73
NECAP1-220ENST00000639841 DEFB130BP0DP73 79 aa4.25□□□□□ -1.73
NECAP1-220ENST00000639841 DEFB130AP0DP74 79 aa4.25□□□□□ -1.73
NECAP1-220ENST00000639841 MRPL36Q9P0J6 103 aaKnown RBP4.25□□□□□ -1.73
NECAP1-220ENST00000639841 IL5P05113 134 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 TDRG1Q3Y452 100 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 SPINK9Q5DT21 86 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 GDF5OSQ5U4N7 250 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 ODF3Q96PU9 254 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 VAMP8Q9BV40 100 aa4.24□□□□□ -1.73
NECAP1-220ENST00000639841 Q8N8P6 123 aa4.23□□□□□ -1.73
NECAP1-220ENST00000639841 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
NECAP1-220ENST00000639841 IBA57-AS1B1ANH7 110 aa4.23□□□□□ -1.73
NECAP1-220ENST00000639841 RBAKDNA6NC62 111 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 SLC25A6P12236 298 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 LINC00315P59091 139 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 SH2D6Q7Z4S9 175 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 DPH3P1Q9H4G8 78 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 TMSB15BA0A087X1C1 80 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 CRYM-AS1A6NIL9 109 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 HMSDA8MTL9 139 aa4.22□□□□□ -1.73
NECAP1-220ENST00000639841 Q6ZRN7 208 aaPredicted RBP4.22□□□□□ -1.73
NECAP1-220ENST00000639841 IGLV10-54A0A075B6I4 117 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 A0A087WSZ3 146 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 NDUFB6O95139 128 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 BAALC-AS2P0C853 105 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 SPANXN5Q5MJ07 72 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 DEFB104AQ8WTQ1 72 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 SMIM7Q9BQ49 75 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
NECAP1-220ENST00000639841 A0A087WTM6 91 aa4.2□□□□□ -1.74
NECAP1-220ENST00000639841 FAM24AA6NFZ4 105 aa4.2□□□□□ -1.74
NECAP1-220ENST00000639841 H3BRN7 92 aa4.2□□□□□ -1.74
NECAP1-220ENST00000639841 NOP10Q9NPE3 64 aaKnown RBP4.2□□□□□ -1.74
NECAP1-220ENST00000639841 TSKUQ8WUA8 353 aa4.2□□□□□ -1.74
NECAP1-220ENST00000639841 KRTAP1-5Q9BYS1 174 aa4.2□□□□□ -1.74
NECAP1-220ENST00000639841 A0A1W2PNM2 257 aa4.19□□□□□ -1.74
NECAP1-220ENST00000639841 NMBP08949 121 aa4.19□□□□□ -1.74
NECAP1-220ENST00000639841 IL7P13232 177 aa4.19□□□□□ -1.74
NECAP1-220ENST00000639841 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
NECAP1-220ENST00000639841 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 TRGV2A0A075B6R0 118 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 A0A087WXM4 84 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 PSCAO43653 123 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 SNCGO76070 127 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 FAUP35544 74 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms