RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 C1orf134Q5TEV5 83 aa12.67□□□□□ -0.38
SCARB2-213ENST00000638680 A0A1B0GU69 56 aa12.67□□□□□ -0.38
SCARB2-213ENST00000638680 PTPRBP23467 1997 aa12.67□□□□□ -0.38
SCARB2-213ENST00000638680 C7orf65Q6ZTY9 151 aa12.66□□□□□ -0.38
SCARB2-213ENST00000638680 TP53AIP1Q9HCN2 124 aa12.66□□□□□ -0.38
SCARB2-213ENST00000638680 SPAG11AQ6PDA7 123 aa12.66□□□□□ -0.38
SCARB2-213ENST00000638680 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
SCARB2-213ENST00000638680 A0A1B0GW54 56 aa12.64□□□□□ -0.39
SCARB2-213ENST00000638680 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
SCARB2-213ENST00000638680 Q8NBF4 154 aa12.63□□□□□ -0.39
SCARB2-213ENST00000638680 MOBPQ13875 183 aa12.63□□□□□ -0.39
SCARB2-213ENST00000638680 Q6ZRX8 168 aa12.63□□□□□ -0.39
SCARB2-213ENST00000638680 ACYP2P14621 99 aa12.62□□□□□ -0.39
SCARB2-213ENST00000638680 ST20-AS1Q8NBB2 130 aa12.61□□□□□ -0.39
SCARB2-213ENST00000638680 FSHBP01225 129 aa12.61□□□□□ -0.39
SCARB2-213ENST00000638680 TLN1Q9Y490 2541 aaKnown RBP12.59□□□□□ -0.39
SCARB2-213ENST00000638680 RPL37AP61513 92 aaKnown RBP12.58□□□□□ -0.4
SCARB2-213ENST00000638680 COL27A1Q8IZC6 1860 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-213ENST00000638680 H3BPC8 53 aa12.57□□□□□ -0.4
SCARB2-213ENST00000638680 PHF5AQ7RTV0 110 aaKnown RBP12.56□□□□□ -0.4
SCARB2-213ENST00000638680 SPACA4Q8TDM5 124 aa12.54□□□□□ -0.4
SCARB2-213ENST00000638680 TRAV22A0A0B4J277 110 aa12.54□□□□□ -0.4
SCARB2-213ENST00000638680 H3BNG1 76 aa12.53□□□□□ -0.4
SCARB2-213ENST00000638680 MDFIQ99750 246 aa12.52□□□□□ -0.4
SCARB2-213ENST00000638680 EPM2AB3EWF7 344 aa12.52□□□□□ -0.41
SCARB2-213ENST00000638680 IGLV6-57P01721 117 aa12.5□□□□□ -0.41
SCARB2-213ENST00000638680 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
SCARB2-213ENST00000638680 Q6ZRP5 223 aa12.49□□□□□ -0.41
SCARB2-213ENST00000638680 COL4A2P08572 1712 aa12.48□□□□□ -0.41
SCARB2-213ENST00000638680 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-213ENST00000638680 EIF4EBP3O60516 100 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-213ENST00000638680 KLK9Q2XQG4 91 aa12.48□□□□□ -0.41
SCARB2-213ENST00000638680 GVQW2A0A096LPI5 108 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-213ENST00000638680 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
SCARB2-213ENST00000638680 SERTAD4-AS1Q5TG53 156 aa12.46□□□□□ -0.41
SCARB2-213ENST00000638680 VPREB1P12018 145 aa12.46□□□□□ -0.41
SCARB2-213ENST00000638680 K7EQZ3 153 aa12.46□□□□□ -0.41
SCARB2-213ENST00000638680 ATP11AUNQ6ZP68 121 aa12.46□□□□□ -0.41
SCARB2-213ENST00000638680 FN1P02751 2386 aaKnown RBP12.46□□□□□ -0.42
SCARB2-213ENST00000638680 CHTF8P0CG12 524 aa12.45□□□□□ -0.42
SCARB2-213ENST00000638680 Q8NAQ8 132 aa12.45□□□□□ -0.42
SCARB2-213ENST00000638680 C16orf90A8MZG2 172 aa12.45□□□□□ -0.42
SCARB2-213ENST00000638680 LINC00313P59037 77 aa12.43□□□□□ -0.42
SCARB2-213ENST00000638680 IGLV8-61A0A075B6I0 122 aa12.43□□□□□ -0.42
SCARB2-213ENST00000638680 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
SCARB2-213ENST00000638680 ERC2-IT1O76042 136 aa12.42□□□□□ -0.42
SCARB2-213ENST00000638680 ABCA12Q86UK0 2595 aa12.42□□□□□ -0.42
SCARB2-213ENST00000638680 A8MUN3 132 aa12.41□□□□□ -0.42
SCARB2-213ENST00000638680 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
SCARB2-213ENST00000638680 MUC4Q99102 2169 aa12.41□□□□□ -0.42
SCARB2-213ENST00000638680 C8orf87E5RJ46 101 aa12.39□□□□□ -0.43
SCARB2-213ENST00000638680 A8MWP4 228 aa12.39□□□□□ -0.43
SCARB2-213ENST00000638680 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-213ENST00000638680 COA5Q86WW8 74 aa12.37□□□□□ -0.43
SCARB2-213ENST00000638680 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
SCARB2-213ENST00000638680 RTL8CO15255 209 aa12.36□□□□□ -0.43
SCARB2-213ENST00000638680 TLN2Q9Y4G6 2542 aa12.35□□□□□ -0.43
SCARB2-213ENST00000638680 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
SCARB2-213ENST00000638680 CENPFP49454 3210 aa12.34□□□□□ -0.43
SCARB2-213ENST00000638680 LOC101927531A0A1B0GV80 90 aa12.34□□□□□ -0.43
SCARB2-213ENST00000638680 PIEZO1Q92508 2521 aa12.34□□□□□ -0.43
SCARB2-213ENST00000638680 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.43
SCARB2-213ENST00000638680 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
SCARB2-213ENST00000638680 PCSK5Q92824 1860 aa12.32□□□□□ -0.44
SCARB2-213ENST00000638680 KCNQ1DNQ9H478 68 aa12.32□□□□□ -0.44
SCARB2-213ENST00000638680 KLKP1Q107X0 134 aa12.31□□□□□ -0.44
SCARB2-213ENST00000638680 LRRK2Q5S007 2527 aa12.31□□□□□ -0.44
SCARB2-213ENST00000638680 NBDYA0A0U1RRE5 68 aa12.31□□□□□ -0.44
SCARB2-213ENST00000638680 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
SCARB2-213ENST00000638680 MRPL34Q9BQ48 92 aaKnown RBP12.3□□□□□ -0.44
SCARB2-213ENST00000638680 SETD2Q9BYW2 2564 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-213ENST00000638680 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
SCARB2-213ENST00000638680 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
SCARB2-213ENST00000638680 IGFL1Q6UW32 110 aa12.28□□□□□ -0.44
SCARB2-213ENST00000638680 Q96NJ1 140 aa12.28□□□□□ -0.44
SCARB2-213ENST00000638680 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.45
SCARB2-213ENST00000638680 H7BZZ5 65 aa12.25□□□□□ -0.45
SCARB2-213ENST00000638680 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
SCARB2-213ENST00000638680 LINC01600Q96MT4 127 aa12.24□□□□□ -0.45
SCARB2-213ENST00000638680 C9orf129Q5T035 196 aaKnown RBP12.24□□□□□ -0.45
SCARB2-213ENST00000638680 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
SCARB2-213ENST00000638680 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
SCARB2-213ENST00000638680 Q8N377 158 aa12.22□□□□□ -0.45
SCARB2-213ENST00000638680 SPINT4Q6UDR6 99 aa12.22□□□□□ -0.45
SCARB2-213ENST00000638680 PRR15Q8IV56 129 aa12.21□□□□□ -0.45
SCARB2-213ENST00000638680 C15orf56Q8N910 161 aa12.21□□□□□ -0.46
SCARB2-213ENST00000638680 USP9YO00507 2555 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-213ENST00000638680 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
SCARB2-213ENST00000638680 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
SCARB2-213ENST00000638680 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
SCARB2-213ENST00000638680 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
SCARB2-213ENST00000638680 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-213ENST00000638680 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
SCARB2-213ENST00000638680 CEP295Q9C0D2 2601 aa12.19□□□□□ -0.46
SCARB2-213ENST00000638680 C8orf17Q9NRJ1 99 aa12.18□□□□□ -0.46
SCARB2-213ENST00000638680 UQCR11O14957 56 aa12.17□□□□□ -0.46
SCARB2-213ENST00000638680 DSCR10P59022 87 aa12.15□□□□□ -0.46
SCARB2-213ENST00000638680 GIG44P09565 113 aaPredicted RBP12.15□□□□□ -0.47
SCARB2-213ENST00000638680 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.47
SCARB2-213ENST00000638680 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms