RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	IGLV5-37	A0A075B6J1	123 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786	LOC107984156	A0A0G2JMH3	177 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786	SCGB1D4	Q6XE38	83 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786	ARL17A	Q8IVW1	177 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786	C7orf33	Q8WU49	177 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786	LITAF	Q99732	161 aa		14.02	□□□□□ -0.17
CHRNA7-231	ENST00000637786		M0QXV9	152 aa		14.01	□□□□□ -0.17
CHRNA7-231	ENST00000637786	RPL24	P83731	157 aa	Known RBP	14.01	□□□□□ -0.17
CHRNA7-231	ENST00000637786	ADAMTSL4-AS1	Q5T5F5	129 aa		14.01	□□□□□ -0.17
CHRNA7-231	ENST00000637786	PAM16	Q9Y3D7	125 aa		14.01	□□□□□ -0.17
CHRNA7-231	ENST00000637786	DAND5	Q8N907	189 aa		14	□□□□□ -0.17
CHRNA7-231	ENST00000637786	TMEM238	C9JI98	176 aa		13.99	□□□□□ -0.17
CHRNA7-231	ENST00000637786	FAM229A	H3BQW9	127 aa		13.99	□□□□□ -0.17
CHRNA7-231	ENST00000637786	SPATA45	Q537H7	98 aa		13.99	□□□□□ -0.17
CHRNA7-231	ENST00000637786	C22orf24	Q9Y442	160 aa		13.99	□□□□□ -0.17
CHRNA7-231	ENST00000637786	COX8A	P10176	69 aa		13.98	□□□□□ -0.17
CHRNA7-231	ENST00000637786	VPREB1	P12018	145 aa		13.98	□□□□□ -0.17
CHRNA7-231	ENST00000637786	PHF5A	Q7RTV0	110 aa	Known RBP	13.98	□□□□□ -0.17
CHRNA7-231	ENST00000637786	BOD1L2	Q8IYS8	172 aa		13.98	□□□□□ -0.17
CHRNA7-231	ENST00000637786	HERC2	O95714	4834 aa		13.97	□□□□□ -0.17
CHRNA7-231	ENST00000637786	LBH	Q53QV2	105 aa	Predicted RBP	13.97	□□□□□ -0.17
CHRNA7-231	ENST00000637786	MIEN1	Q9BRT3	115 aa		13.97	□□□□□ -0.17
CHRNA7-231	ENST00000637786	DLEU1	O43261	78 aa		13.96	□□□□□ -0.17
CHRNA7-231	ENST00000637786	MRPL55	Q7Z7F7	128 aa	Known RBP	13.96	□□□□□ -0.17
CHRNA7-231	ENST00000637786	NKAPP1	Q8N9T2	125 aa		13.96	□□□□□ -0.17
CHRNA7-231	ENST00000637786		Q5VSD8	79 aa		13.95	□□□□□ -0.18
CHRNA7-231	ENST00000637786		Q6ZVH6	145 aa		13.95	□□□□□ -0.18
CHRNA7-231	ENST00000637786	SPANXD	Q9BXN6	97 aa		13.95	□□□□□ -0.18
CHRNA7-231	ENST00000637786	KRTAP17-1	Q9BYP8	105 aa		13.95	□□□□□ -0.18
CHRNA7-231	ENST00000637786	SPANXC	Q9NY87	97 aa		13.95	□□□□□ -0.18
CHRNA7-231	ENST00000637786	PLA2G1B	P04054	148 aa	Known RBP	13.94	□□□□□ -0.18
CHRNA7-231	ENST00000637786		Q8NDZ9	215 aa		13.94	□□□□□ -0.18
CHRNA7-231	ENST00000637786	FAT1	Q14517	4588 aa		13.93	□□□□□ -0.18
CHRNA7-231	ENST00000637786	RPL37A	P61513	92 aa	Known RBP	13.92	□□□□□ -0.18
CHRNA7-231	ENST00000637786	SOSTDC1	Q6X4U4	206 aa		13.92	□□□□□ -0.18
CHRNA7-231	ENST00000637786	LINC00308	Q8TCZ7	52 aa		13.92	□□□□□ -0.18
CHRNA7-231	ENST00000637786	PPDPF	Q9H3Y8	114 aa		13.92	□□□□□ -0.18
CHRNA7-231	ENST00000637786	NDUFC2	O95298	119 aa		13.91	□□□□□ -0.18
CHRNA7-231	ENST00000637786	COPS9	Q8WXC6	57 aa		13.91	□□□□□ -0.18
CHRNA7-231	ENST00000637786	C14orf144	Q96I85	54 aa		13.91	□□□□□ -0.18
CHRNA7-231	ENST00000637786	VPS13B	Q7Z7G8	4022 aa		13.9	□□□□□ -0.18
CHRNA7-231	ENST00000637786	IFITM1	P13164	125 aa		13.9	□□□□□ -0.18
CHRNA7-231	ENST00000637786	UBE2B	P63146	152 aa		13.9	□□□□□ -0.18
CHRNA7-231	ENST00000637786	LINC00167	Q96N53	147 aa		13.9	□□□□□ -0.18
CHRNA7-231	ENST00000637786	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.9	□□□□□ -0.18
CHRNA7-231	ENST00000637786	LOC105371267	A0A1B0GV96	52 aa		13.89	□□□□□ -0.19
CHRNA7-231	ENST00000637786	EIF4EBP3	O60516	100 aa	Predicted RBP	13.89	□□□□□ -0.19
CHRNA7-231	ENST00000637786	NPC2	P61916	151 aa		13.89	□□□□□ -0.19
CHRNA7-231	ENST00000637786	S100A12	P80511	92 aa		13.89	□□□□□ -0.19
CHRNA7-231	ENST00000637786	SLC25A34	Q6PIV7	304 aa		13.89	□□□□□ -0.19
CHRNA7-231	ENST00000637786		M0R378	163 aa		13.88	□□□□□ -0.19
CHRNA7-231	ENST00000637786	SMIM6	P0DI80	62 aa		13.88	□□□□□ -0.19
CHRNA7-231	ENST00000637786	KRTAP10-4	P60372	401 aa	Predicted RBP	13.88	□□□□□ -0.19
CHRNA7-231	ENST00000637786	TRBV10-2	A0A0K0K1G8	114 aa		13.87	□□□□□ -0.19
CHRNA7-231	ENST00000637786	PRR3	P79522	188 aa	Known RBP	13.87	□□□□□ -0.19
CHRNA7-231	ENST00000637786	KRTAP11-1	Q8IUC1	163 aa		13.86	□□□□□ -0.19
CHRNA7-231	ENST00000637786	PSORS1C2	Q9UIG4	136 aa		13.86	□□□□□ -0.19
CHRNA7-231	ENST00000637786	GAGE10	A6NGK3	116 aa		13.85	□□□□□ -0.19
CHRNA7-231	ENST00000637786	HIGD1B	Q9P298	99 aa		13.85	□□□□□ -0.19
CHRNA7-231	ENST00000637786	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
CHRNA7-231	ENST00000637786	SRRM2	Q9UQ35	2752 aa	Known RBP	13.83	□□□□□ -0.19
CHRNA7-231	ENST00000637786	IGLV1-50	A0A075B6I6	118 aa		13.83	□□□□□ -0.2
CHRNA7-231	ENST00000637786	RPL37AP8	A6NKH3	93 aa		13.83	□□□□□ -0.2
CHRNA7-231	ENST00000637786	NCR3	O14931	201 aa		13.83	□□□□□ -0.2
CHRNA7-231	ENST00000637786	MUSTN1	Q8IVN3	82 aa		13.81	□□□□□ -0.2
CHRNA7-231	ENST00000637786	KRTAP4-5	Q9BYR2	181 aa		13.8	□□□□□ -0.2
CHRNA7-231	ENST00000637786	IGKV2-28	A0A075B6P5	120 aa		13.79	□□□□□ -0.2
CHRNA7-231	ENST00000637786	IGKV2D-28	P01615	120 aa		13.79	□□□□□ -0.2
CHRNA7-231	ENST00000637786	C1orf137	Q5JT78	98 aa		13.79	□□□□□ -0.2
CHRNA7-231	ENST00000637786	C2orf91	Q6ZV80	131 aa		13.79	□□□□□ -0.2
CHRNA7-231	ENST00000637786	LINC00518	Q8N0U6	118 aa		13.79	□□□□□ -0.2
CHRNA7-231	ENST00000637786	HIST1H4G	Q99525	98 aa		13.78	□□□□□ -0.2
CHRNA7-231	ENST00000637786	TRBV10-3	A0A0K0K1G6	114 aa		13.76	□□□□□ -0.21
CHRNA7-231	ENST00000637786	UQCR10	Q9UDW1	63 aa		13.76	□□□□□ -0.21
CHRNA7-231	ENST00000637786	IGLV6-57	P01721	117 aa		13.75	□□□□□ -0.21
CHRNA7-231	ENST00000637786	DDT	P30046	118 aa		13.75	□□□□□ -0.21
CHRNA7-231	ENST00000637786	S100A7L2	Q5SY68	101 aa		13.75	□□□□□ -0.21
CHRNA7-231	ENST00000637786	KCNQ1DN	Q9H478	68 aa		13.75	□□□□□ -0.21
CHRNA7-231	ENST00000637786	PRY	O14603	147 aa		13.74	□□□□□ -0.21
CHRNA7-231	ENST00000637786	BCE1	O60756	84 aa		13.74	□□□□□ -0.21
CHRNA7-231	ENST00000637786	IGLV7-43	P04211	117 aa		13.74	□□□□□ -0.21
CHRNA7-231	ENST00000637786	TAL2	Q16559	108 aa		13.73	□□□□□ -0.21
CHRNA7-231	ENST00000637786	REG3G	Q6UW15	175 aa		13.73	□□□□□ -0.21
CHRNA7-231	ENST00000637786	TMEM126A	Q9H061	195 aa		13.73	□□□□□ -0.21
CHRNA7-231	ENST00000637786	CBY1	Q9Y3M2	126 aa		13.72	□□□□□ -0.21
CHRNA7-231	ENST00000637786	LINC00337	Q8N6G1	96 aa		13.71	□□□□□ -0.21
CHRNA7-231	ENST00000637786	HNRNPA3	P51991	378 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-231	ENST00000637786	PKHD1L1	Q86WI1	4243 aa		13.69	□□□□□ -0.22
CHRNA7-231	ENST00000637786		A4D1N5	150 aa		13.69	□□□□□ -0.22
CHRNA7-231	ENST00000637786	SPRR1A	P35321	89 aa		13.69	□□□□□ -0.22
CHRNA7-231	ENST00000637786	INAFM2	P0DMQ5	153 aa		13.68	□□□□□ -0.22
CHRNA7-231	ENST00000637786	SPINK6	Q6UWN8	80 aa		13.68	□□□□□ -0.22
CHRNA7-231	ENST00000637786	OR13C6P	Q8NH95	151 aa		13.68	□□□□□ -0.22
CHRNA7-231	ENST00000637786	TRAV13-2	A0A0B4J235	113 aa		13.67	□□□□□ -0.22
CHRNA7-231	ENST00000637786	C12orf57	Q99622	126 aa		13.67	□□□□□ -0.22
CHRNA7-231	ENST00000637786	TRAV23DV6	A0A075B6W5	121 aa		13.66	□□□□□ -0.22
CHRNA7-231	ENST00000637786	ZNF861P	O60384	105 aa		13.66	□□□□□ -0.22
CHRNA7-231	ENST00000637786	RPL28	P46779	137 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-231	ENST00000637786	CEND1	Q8N111	149 aa		13.65	□□□□□ -0.22
CHRNA7-231	ENST00000637786	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.64	□□□□□ -0.23

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