RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 CSNK1G2-AS1Q8NCQ2 148 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 ITPR3Q14573 2671 aa5.27□□□□□ -1.57
SCN8A-212ENST00000636945 NREPQ16612 68 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 STHQ8IWL8 128 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 OCR1Q9BZK8 76 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 C11orf68Q9H3H3 251 aaKnown RBP5.26□□□□□ -1.57
SCN8A-212ENST00000636945 HAMPP81172 84 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 CELA1Q9UNI1 258 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 ACANP16112 2415 aa5.26□□□□□ -1.57
SCN8A-212ENST00000636945 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
SCN8A-212ENST00000636945 LCE6AA0A183 80 aa5.25□□□□□ -1.57
SCN8A-212ENST00000636945 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
SCN8A-212ENST00000636945 NBPF19A0A087WUL8 3843 aa5.25□□□□□ -1.57
SCN8A-212ENST00000636945 DYNLRB2Q8TF09 96 aa5.25□□□□□ -1.57
SCN8A-212ENST00000636945 HIVEP1P15822 2718 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 BPY2O14599 106 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 MAPK1IP1LQ8NDC0 245 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 CR1P17927 2039 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 CSPG4Q6UVK1 2322 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 TEP1Q99973 2627 aaKnown RBP5.24□□□□□ -1.57
SCN8A-212ENST00000636945 IGKV4-1P06312 121 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 C1orf195Q5TG92 126 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 SMR3AQ99954 134 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 MTORP42345 2549 aa5.24□□□□□ -1.57
SCN8A-212ENST00000636945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.23□□□□□ -1.57
SCN8A-212ENST00000636945 TRGV2A0A075B6R0 118 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 A0A0J9YWU9 116 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 IGHV4-30-4P0DP06 118 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 ESRGQ1W209 222 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 Q6ZQY7 126 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 LINC01356Q8N9X3 169 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
SCN8A-212ENST00000636945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCN8A-212ENST00000636945 TRGV4A0A0C4DH28 118 aa5.22□□□□□ -1.57
SCN8A-212ENST00000636945 CCL24O00175 119 aa5.22□□□□□ -1.57
SCN8A-212ENST00000636945 FLNAP21333 2647 aaKnown RBP5.22□□□□□ -1.57
SCN8A-212ENST00000636945 PRYO14603 147 aa5.22□□□□□ -1.57
SCN8A-212ENST00000636945 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
SCN8A-212ENST00000636945 V9GYY9 64 aa5.22□□□□□ -1.57
SCN8A-212ENST00000636945 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.57
SCN8A-212ENST00000636945 PRR15Q8IV56 129 aa5.21□□□□□ -1.57
SCN8A-212ENST00000636945 MAP1AP78559 2803 aaPredicted RBP5.21□□□□□ -1.58
SCN8A-212ENST00000636945 SEC61GP60059 68 aa5.21□□□□□ -1.58
SCN8A-212ENST00000636945 GVQW2A0A096LPI5 108 aaPredicted RBP5.21□□□□□ -1.58
SCN8A-212ENST00000636945 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
SCN8A-212ENST00000636945 COX7BP24311 80 aa5.21□□□□□ -1.58
SCN8A-212ENST00000636945 HIVEP2P31629 2446 aa5.21□□□□□ -1.58
SCN8A-212ENST00000636945 Q6ZRU5 148 aa5.2□□□□□ -1.58
SCN8A-212ENST00000636945 CMC4P56277 68 aaPredicted RBP5.2□□□□□ -1.58
SCN8A-212ENST00000636945 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
SCN8A-212ENST00000636945 Q1T7F1 81 aa5.2□□□□□ -1.58
SCN8A-212ENST00000636945 AKAP9Q99996 3911 aa5.2□□□□□ -1.58
SCN8A-212ENST00000636945 TLN2Q9Y4G6 2542 aa5.2□□□□□ -1.58
SCN8A-212ENST00000636945 hDV103S1A0JD37 113 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 KRTAP1-1Q07627 177 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 LINC00269Q8N2A0 174 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 CHCHD10Q8WYQ3 142 aaPredicted RBP5.19□□□□□ -1.58
SCN8A-212ENST00000636945 CSMD2Q7Z408 3487 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 SCXQ7RTU7 201 aa5.19□□□□□ -1.58
SCN8A-212ENST00000636945 ZCCHC13Q8WW36 166 aaKnown RBP5.19□□□□□ -1.58
SCN8A-212ENST00000636945 INAFM1C9JVW0 142 aa5.18□□□□□ -1.58
SCN8A-212ENST00000636945 FUSP35637 526 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN8A-212ENST00000636945 LINC01006Q8NI28 216 aa5.18□□□□□ -1.58
SCN8A-212ENST00000636945 DIRC1Q969H9 104 aa5.17□□□□□ -1.58
SCN8A-212ENST00000636945 C2CD3Q4AC94 2353 aa5.17□□□□□ -1.58
SCN8A-212ENST00000636945 SONP18583 2426 aaKnown RBP5.17□□□□□ -1.58
SCN8A-212ENST00000636945 GYPEP15421 78 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 UNQ6190/PRO20217Q6UXQ8 127 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
SCN8A-212ENST00000636945 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 SETD2Q9BYW2 2564 aaPredicted RBP5.16□□□□□ -1.58
SCN8A-212ENST00000636945 CLPSL2Q6UWE3 100 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 Q6ZRP5 223 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 LINC00528Q8N1L1 170 aa5.16□□□□□ -1.58
SCN8A-212ENST00000636945 FN1P02751 2386 aaKnown RBP5.16□□□□□ -1.58
SCN8A-212ENST00000636945 HIGD2AQ9BW72 106 aa5.15□□□□□ -1.58
SCN8A-212ENST00000636945 REG3AQ06141 175 aa5.15□□□□□ -1.59
SCN8A-212ENST00000636945 A0A1B0GW54 56 aa5.15□□□□□ -1.59
SCN8A-212ENST00000636945 KHDC1LQ5JSQ8 128 aa5.15□□□□□ -1.59
SCN8A-212ENST00000636945 MXRA5Q9NR99 2828 aa5.15□□□□□ -1.59
SCN8A-212ENST00000636945 IGLV1-51P01701 117 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 Q8N9L7 120 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 WFDC10AQ9H1F0 79 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 PRO0255Q9UI72 69 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 JMJD1CQ15652 2540 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 VPREB1P12018 145 aa5.14□□□□□ -1.59
SCN8A-212ENST00000636945 IGLV5-48A0A075B6I7 105 aa5.13□□□□□ -1.59
SCN8A-212ENST00000636945 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
SCN8A-212ENST00000636945 C6orf48Q9UBA6 75 aa5.13□□□□□ -1.59
SCN8A-212ENST00000636945 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
SCN8A-212ENST00000636945 ZANQ9Y493 2812 aa5.12□□□□□ -1.59
SCN8A-212ENST00000636945 NSD1Q96L73 2696 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms