RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
CLN5-213ENST00000636681 GCSHP23434 173 aa6.78□□□□□ -1.32
CLN5-213ENST00000636681 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
CLN5-213ENST00000636681 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
CLN5-213ENST00000636681 SERTAD4-AS1Q5TG53 156 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 MUSTN1Q8IVN3 82 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 TIMM17BO60830 172 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 COX17Q14061 63 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
CLN5-213ENST00000636681 C16orf90A8MZG2 172 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 HNRNPA3P51991 378 aaKnown RBP6.76□□□□□ -1.33
CLN5-213ENST00000636681 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLN5-213ENST00000636681 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
CLN5-213ENST00000636681 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
CLN5-213ENST00000636681 PCP4L1A6NKN8 68 aa6.75□□□□□ -1.33
CLN5-213ENST00000636681 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
CLN5-213ENST00000636681 CTAG1AP78358 180 aa6.75□□□□□ -1.33
CLN5-213ENST00000636681 FAM19A5Q7Z5A7 132 aaPredicted RBP6.75□□□□□ -1.33
CLN5-213ENST00000636681 SPANXB1Q9NS25 103 aaPredicted RBP6.75□□□□□ -1.33
CLN5-213ENST00000636681 SPACA4Q8TDM5 124 aa6.74□□□□□ -1.33
CLN5-213ENST00000636681 A0A087WYN8 130 aa6.73□□□□□ -1.33
CLN5-213ENST00000636681 NCR3O14931 201 aa6.73□□□□□ -1.33
CLN5-213ENST00000636681 DDTP30046 118 aa6.73□□□□□ -1.33
CLN5-213ENST00000636681 FXYD2P54710 66 aa6.73□□□□□ -1.33
CLN5-213ENST00000636681 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
CLN5-213ENST00000636681 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 VPREB1P12018 145 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 IGKV2-28A0A075B6P5 120 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 A4D1N5 150 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 IGKV2D-28P01615 120 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 HINT1P49773 126 aaPredicted RBP6.72□□□□□ -1.33
CLN5-213ENST00000636681 Q6ZSA8 131 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
CLN5-213ENST00000636681 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
CLN5-213ENST00000636681 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
CLN5-213ENST00000636681 GHRHP01286 108 aa6.71□□□□□ -1.34
CLN5-213ENST00000636681 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
CLN5-213ENST00000636681 CEND1Q8N111 149 aa6.71□□□□□ -1.34
CLN5-213ENST00000636681 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
CLN5-213ENST00000636681 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
CLN5-213ENST00000636681 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
CLN5-213ENST00000636681 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
CLN5-213ENST00000636681 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
CLN5-213ENST00000636681 HSD52Q0P140 79 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 HSPG2P98160 4391 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 RYR1P21817 5038 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 RPL37AP8A6NKH3 93 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 IFITM1P13164 125 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 XGP55808 180 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
CLN5-213ENST00000636681 K7ERJ3 54 aa6.68□□□□□ -1.34
CLN5-213ENST00000636681 M0QXV9 152 aa6.68□□□□□ -1.34
CLN5-213ENST00000636681 Q6ZVH6 145 aa6.68□□□□□ -1.34
CLN5-213ENST00000636681 C7orf33Q8WU49 177 aa6.68□□□□□ -1.34
CLN5-213ENST00000636681 CFC1BP0CG36 223 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 CFC1P0CG37 223 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 BATFQ16520 125 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 TAL2Q16559 108 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 FAT1Q14517 4588 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
CLN5-213ENST00000636681 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
CLN5-213ENST00000636681 J3QL48 77 aa6.66□□□□□ -1.34
CLN5-213ENST00000636681 NKAPP1Q8N9T2 125 aa6.66□□□□□ -1.34
CLN5-213ENST00000636681 NHP2Q9NX24 153 aaKnown RBP6.66□□□□□ -1.34
CLN5-213ENST00000636681 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.34
CLN5-213ENST00000636681 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
CLN5-213ENST00000636681 NDUFC2O95298 119 aa6.65□□□□□ -1.34
CLN5-213ENST00000636681 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.34
CLN5-213ENST00000636681 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
CLN5-213ENST00000636681 MRPL55Q7Z7F7 128 aaKnown RBP6.65□□□□□ -1.34
CLN5-213ENST00000636681 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
CLN5-213ENST00000636681 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
CLN5-213ENST00000636681 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
CLN5-213ENST00000636681 SNHG12Q9BXW3 62 aa6.64□□□□□ -1.35
CLN5-213ENST00000636681 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
CLN5-213ENST00000636681 A6NDN8 102 aa6.63□□□□□ -1.35
CLN5-213ENST00000636681 H7C2G1 150 aa6.63□□□□□ -1.35
CLN5-213ENST00000636681 M0R378 163 aa6.63□□□□□ -1.35
CLN5-213ENST00000636681 RPL13AP40429 203 aaKnown RBP6.62□□□□□ -1.35
CLN5-213ENST00000636681 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
CLN5-213ENST00000636681 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
CLN5-213ENST00000636681 RAB37Q96AX2 223 aa6.62□□□□□ -1.35
CLN5-213ENST00000636681 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
CLN5-213ENST00000636681 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
CLN5-213ENST00000636681 UBE2BP63146 152 aa6.61□□□□□ -1.35
CLN5-213ENST00000636681 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
CLN5-213ENST00000636681 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms