RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 PLA2G2DQ9UNK4 145 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 TIMM17BO60830 172 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
CHD2-224ENST00000636410 RPL24P83731 157 aaKnown RBP3.32□□□□□ -1.88
CHD2-224ENST00000636410 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
CHD2-224ENST00000636410 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 TTTY13Q9BZ97 58 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 TP73-AS1Q9UF72 201 aa3.32□□□□□ -1.88
CHD2-224ENST00000636410 LOC107984156A0A0G2JMH3 177 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 VPREB1P12018 145 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 UBE2BP63146 152 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
CHD2-224ENST00000636410 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
CHD2-224ENST00000636410 SCGB1D4Q6XE38 83 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
CHD2-224ENST00000636410 PCP2Q8IVA1 136 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 ARL17AQ8IVW1 177 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 DAND5Q8N907 189 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 Q8NDZ9 215 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 LITAFQ99732 161 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 MIEN1Q9BRT3 115 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 KRTAP4-5Q9BYR2 181 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 C22orf24Q9Y442 160 aa3.31□□□□□ -1.88
CHD2-224ENST00000636410 TMEM238C9JI98 176 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 ADAMTSL4-AS1Q5T5F5 129 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 BOD1L2Q8IYS8 172 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 VAMP8Q9BV40 100 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 PSORS1C2Q9UIG4 136 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
CHD2-224ENST00000636410 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 GAGE10A6NGK3 116 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 NDUFC2O95298 119 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 NPC2P61916 151 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 SPATA45Q537H7 98 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 PYY3Q5JQD4 70 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 C1orf137Q5JT78 98 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 KRTAP11-1Q8IUC1 163 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 LINC00308Q8TCZ7 52 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 LINC00167Q96N53 147 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
CHD2-224ENST00000636410 FAT1Q14517 4588 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 IGLV1-50A0A075B6I6 118 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 IGKV2-28A0A075B6P5 120 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 TRBV10-2A0A0K0K1G8 114 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 M0R378 163 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 NCR3O14931 201 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 IGKV2D-28P01615 120 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 INAFM2P0DMQ5 153 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 COX8AP10176 69 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 HNRNPA3P51991 378 aaKnown RBP3.28□□□□□ -1.88
CHD2-224ENST00000636410 Q6ZVH6 145 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
CHD2-224ENST00000636410 SPANXB1Q9NS25 103 aaPredicted RBP3.28□□□□□ -1.88
CHD2-224ENST00000636410 DLEU1O43261 78 aa3.27□□□□□ -1.89
CHD2-224ENST00000636410 EIF4EBP3O60516 100 aaPredicted RBP3.27□□□□□ -1.89
CHD2-224ENST00000636410 IGLV7-43P04211 117 aa3.27□□□□□ -1.89
CHD2-224ENST00000636410 IFITM1P13164 125 aa3.27□□□□□ -1.89
CHD2-224ENST00000636410 PRYO14603 147 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 BCE1O60756 84 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 DDTP30046 118 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 S100A12P80511 92 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 S100A7L2Q5SY68 101 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 SLC25A34Q6PIV7 304 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 SPINK6Q6UWN8 80 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 C14orf144Q96I85 54 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 TMEM126AQ9H061 195 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
CHD2-224ENST00000636410 TRBV10-3A0A0K0K1G6 114 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 IGLV6-57P01721 117 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 SMIM6P0DI80 62 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD2-224ENST00000636410 MUSTN1Q8IVN3 82 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
CHD2-224ENST00000636410 TRAV23DV6A0A075B6W5 121 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 H0Y9J4 135 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 ZNF861PO60384 105 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 SPRR1AP35321 89 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 RPL28P46779 137 aaKnown RBP3.24□□□□□ -1.89
CHD2-224ENST00000636410 UBE2AP49459 152 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 C2orf91Q6ZV80 131 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 FAM19A1Q7Z5A9 133 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 KRTAP13-1Q8IUC0 172 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 LINC00337Q8N6G1 96 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 DIRC1Q969H9 104 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 CBY1Q9Y3M2 126 aa3.24□□□□□ -1.89
CHD2-224ENST00000636410 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
CHD2-224ENST00000636410 ETDCA0A1B0GVM5 59 aa3.23□□□□□ -1.89
CHD2-224ENST00000636410 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms