RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
LINC00649-220ENST00000628906 TRAV9-1A0A075B6T8 112 aa2.63□□□□□ -1.99
LINC00649-220ENST00000628906 ETDCA0A1B0GVM5 59 aa2.63□□□□□ -1.99
LINC00649-220ENST00000628906 H7C2G1 150 aa2.63□□□□□ -1.99
LINC00649-220ENST00000628906 RAB14P61106 215 aa2.63□□□□□ -1.99
LINC00649-220ENST00000628906 CCDC160A6NGH7 325 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 A8MUU9 505 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 CNPY1Q3B7I2 92 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 CST9LP1Q5W188 147 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 TMUB2Q71RG4 321 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 MTURNQ8N3F0 131 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 Q9BRP9 147 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
LINC00649-220ENST00000628906 CTXND1A0A1B0GTU2 59 aa2.61□□□□□ -1.99
LINC00649-220ENST00000628906 BTCP35070 178 aa2.61□□□□□ -1.99
LINC00649-220ENST00000628906 PYDC2Q56P42 97 aa2.61□□□□□ -1.99
LINC00649-220ENST00000628906 VCX3BQ9H321 246 aa2.61□□□□□ -1.99
LINC00649-220ENST00000628906 IGLV4-3A0A075B6K6 122 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 RAB4AP20338 218 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 PAPPA-AS1Q5QFB9 102 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 SEC22CQ9BRL7 303 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 CDKN2A-AS1Q9UH64 79 aa2.6□□□□□ -1.99
LINC00649-220ENST00000628906 TCAPO15273 167 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 PPP1R17O96001 155 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 RPL35P42766 123 aaKnown RBP2.59□□□□□ -1.99
LINC00649-220ENST00000628906 ZNF625Q96I27 306 aaPredicted RBP2.59□□□□□ -1.99
LINC00649-220ENST00000628906 TMEM141Q96I45 108 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 Q96NJ1 140 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 IMUPQ9GZP8 106 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 VCX3AQ9NNX9 186 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 PAM16Q9Y3D7 125 aa2.59□□□□□ -1.99
LINC00649-220ENST00000628906 TRBV20OR9-2A0A075B6H5 130 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 C5orf52A6NGY3 159 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 PAGE4O60829 102 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 SPRR1BP22528 89 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 PFN2P35080 140 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 IFI27P40305 119 aaPredicted RBP2.58□□□□□ -2
LINC00649-220ENST00000628906 IGFL1Q6UW32 110 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 C2orf66Q6UXQ4 117 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 TEX43Q6ZNM6 134 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 COX7B2Q8TF08 81 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 TMEM191AQ9H0A3 160 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 V9GYH0 126 aa2.58□□□□□ -2
LINC00649-220ENST00000628906 A0A087WXM4 84 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 SMIM1B2RUZ4 78 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 SMKR1H3BMG3 65 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 RAB5AP20339 215 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 HERVK_113P63121 156 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 PDZD11Q5EBL8 140 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 Q6ZRX8 168 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 AMELXQ99217 191 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 PRO1933Q9H354 126 aa2.57□□□□□ -2
LINC00649-220ENST00000628906 MPC2O95563 127 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 COX17Q14061 63 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 ZC2HC1BQ5TFG8 222 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 SLC25A34Q6PIV7 304 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 PPP1R1CQ8WVI7 109 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 SMIM12Q96EX1 92 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 C20orf78Q9BR46 151 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 C2orf88Q9BSF0 95 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 Q9H521 79 aa2.56□□□□□ -2
LINC00649-220ENST00000628906 TRBV24-1A0A075B6N3 115 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 CENPXA8MT69 81 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 ATP5LO75964 103 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 TCL1BO95988 128 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 KRTAP12-2P59991 146 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 SEC11AP67812 179 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 CENPWQ5EE01 88 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 AMN1Q8IY45 258 aa2.55□□□□□ -2
LINC00649-220ENST00000628906 MAP1LC3B2A6NCE7 125 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 AKR1D1P51857 326 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 FAM218AQ96MZ4 157 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 MAP1LC3BQ9GZQ8 125 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 VCX2Q9H322 139 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 LAMTOR3Q9UHA4 124 aa2.54□□□□□ -2
LINC00649-220ENST00000628906 TRBV10-3A0A0K0K1G6 114 aa2.53□□□□□ -2
LINC00649-220ENST00000628906 PET100P0DJ07 73 aa2.53□□□□□ -2
LINC00649-220ENST00000628906 BIN3Q9NQY0 253 aa2.53□□□□□ -2
LINC00649-220ENST00000628906 ERG28Q9UKR5 140 aa2.53□□□□□ -2
LINC00649-220ENST00000628906 PFDN1O60925 122 aa2.52□□□□□ -2.01
LINC00649-220ENST00000628906 H2BFSP57053 126 aa2.52□□□□□ -2.01
LINC00649-220ENST00000628906 CCL20P78556 96 aa2.52□□□□□ -2.01
LINC00649-220ENST00000628906 C11orf52Q96A22 123 aa2.52□□□□□ -2.01
LINC00649-220ENST00000628906 LINC00862A6NCI5 91 aa2.51□□□□□ -2.01
LINC00649-220ENST00000628906 GNG4P50150 75 aa2.51□□□□□ -2.01
LINC00649-220ENST00000628906 NDUFA6P56556 154 aa2.51□□□□□ -2.01
LINC00649-220ENST00000628906 S100A12P80511 92 aa2.51□□□□□ -2.01
LINC00649-220ENST00000628906 JOSD1Q15040 202 aaPredicted RBP2.51□□□□□ -2.01
LINC00649-220ENST00000628906 SMIM2Q9BVW6 85 aa2.51□□□□□ -2.01
LINC00649-220ENST00000628906 IGLV5-45A0A087WSX0 123 aa2.5□□□□□ -2.01
LINC00649-220ENST00000628906 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
LINC00649-220ENST00000628906 GIPP09681 153 aaPredicted RBP2.5□□□□□ -2.01
LINC00649-220ENST00000628906 TRIQKQ629K1 86 aa2.5□□□□□ -2.01
LINC00649-220ENST00000628906 A0A1B0GUT8 65 aa2.49□□□□□ -2.01
LINC00649-220ENST00000628906 PLA2G10O15496 165 aa2.49□□□□□ -2.01
LINC00649-220ENST00000628906 RBM3P98179 157 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms