RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
NR1I3-235ENST00000628566 PLA2G2DQ9UNK4 145 aa4.88□□□□□ -1.63
NR1I3-235ENST00000628566 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
NR1I3-235ENST00000628566 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
NR1I3-235ENST00000628566 LINC01545Q5VT33 79 aa4.87□□□□□ -1.63
NR1I3-235ENST00000628566 MRPL55Q7Z7F7 128 aaKnown RBP4.87□□□□□ -1.63
NR1I3-235ENST00000628566 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
NR1I3-235ENST00000628566 E9PLD3 99 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 C3orf79P0CE67 100 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 C1orf137Q5JT78 98 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 SPINK6Q6UWN8 80 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 SND1-IT1Q9HBX3 110 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 PSORS1C2Q9UIG4 136 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 HERC1Q15751 4861 aa4.86□□□□□ -1.63
NR1I3-235ENST00000628566 OXTP01178 125 aa4.85□□□□□ -1.63
NR1I3-235ENST00000628566 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
NR1I3-235ENST00000628566 SNRPEP62304 92 aaKnown RBP4.85□□□□□ -1.63
NR1I3-235ENST00000628566 S100A12P80511 92 aa4.85□□□□□ -1.63
NR1I3-235ENST00000628566 SERTAD4-AS1Q5TG53 156 aa4.85□□□□□ -1.63
NR1I3-235ENST00000628566 REG3GQ6UW15 175 aa4.85□□□□□ -1.63
NR1I3-235ENST00000628566 IGLV5-37A0A075B6J1 123 aa4.84□□□□□ -1.63
NR1I3-235ENST00000628566 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
NR1I3-235ENST00000628566 SMIM13P0DJ93 91 aa4.84□□□□□ -1.63
NR1I3-235ENST00000628566 DIRC1Q969H9 104 aa4.84□□□□□ -1.63
NR1I3-235ENST00000628566 HSBP1L1C9JCN9 74 aa4.83□□□□□ -1.64
NR1I3-235ENST00000628566 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
NR1I3-235ENST00000628566 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
NR1I3-235ENST00000628566 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
NR1I3-235ENST00000628566 IGKV2D-26A0A0A0MRZ7 120 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 GAGE10A6NGK3 116 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 ZNF815PA8K554 130 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
NR1I3-235ENST00000628566 IGLV7-43P04211 117 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 TSPEAR-AS2P59090 65 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 BOD1L2Q8IYS8 172 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 HIST1H2BLQ99880 126 aa4.82□□□□□ -1.64
NR1I3-235ENST00000628566 RPL37AP8A6NKH3 93 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 M0R378 163 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 VPREB1P12018 145 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 RPL28P46779 137 aaKnown RBP4.81□□□□□ -1.64
NR1I3-235ENST00000628566 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 KRTAP7-1Q8IUC3 87 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 CBY1Q9Y3M2 126 aa4.81□□□□□ -1.64
NR1I3-235ENST00000628566 IGKV2-28A0A075B6P5 120 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 BCE1O60756 84 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 TIMM17BO60830 172 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 IGKV2D-28P01615 120 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 UBE2AP49459 152 aa4.8□□□□□ -1.64
NR1I3-235ENST00000628566 HNRNPA3P51991 378 aaKnown RBP4.8□□□□□ -1.64
NR1I3-235ENST00000628566 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
NR1I3-235ENST00000628566 ZNF861PO60384 105 aa4.79□□□□□ -1.64
NR1I3-235ENST00000628566 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
NR1I3-235ENST00000628566 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
NR1I3-235ENST00000628566 ATOH7Q8N100 152 aa4.79□□□□□ -1.64
NR1I3-235ENST00000628566 SPANXB1Q9NS25 103 aaPredicted RBP4.79□□□□□ -1.64
NR1I3-235ENST00000628566 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 TRBV10-2A0A0K0K1G8 114 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 H0Y9J4 135 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 NDUFC2O95298 119 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 S100A7L2Q5SY68 101 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 Q6ZVH6 145 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 DAND5Q8N907 189 aa4.78□□□□□ -1.64
NR1I3-235ENST00000628566 PRYO14603 147 aa4.77□□□□□ -1.65
NR1I3-235ENST00000628566 NCR3O14931 201 aa4.77□□□□□ -1.65
NR1I3-235ENST00000628566 KRTAP11-1Q8IUC1 163 aa4.77□□□□□ -1.65
NR1I3-235ENST00000628566 TMEM126AQ9H061 195 aa4.77□□□□□ -1.65
NR1I3-235ENST00000628566 DDTP30046 118 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 HINT1P49773 126 aaPredicted RBP4.76□□□□□ -1.65
NR1I3-235ENST00000628566 NPC2P61916 151 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 XP32Q5T750 250 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 FAM19A1Q7Z5A9 133 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 LINC00518Q8N0U6 118 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 LINC01600Q96MT4 127 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
NR1I3-235ENST00000628566 ETDCA0A1B0GVM5 59 aa4.75□□□□□ -1.65
NR1I3-235ENST00000628566 IFITM1P13164 125 aa4.75□□□□□ -1.65
NR1I3-235ENST00000628566 RPL13AP40429 203 aaKnown RBP4.75□□□□□ -1.65
NR1I3-235ENST00000628566 ANKRD39Q53RE8 183 aa4.75□□□□□ -1.65
NR1I3-235ENST00000628566 LINC00308Q8TCZ7 52 aa4.75□□□□□ -1.65
NR1I3-235ENST00000628566 SPANXDQ9BXN6 97 aa4.75□□□□□ -1.65
NR1I3-235ENST00000628566 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
NR1I3-235ENST00000628566 TRBV10-3A0A0K0K1G6 114 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 JOSD1Q15040 202 aaPredicted RBP4.74□□□□□ -1.65
NR1I3-235ENST00000628566 ADAMTSL4-AS1Q5T5F5 129 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 LINC00337Q8N6G1 96 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 Q8NDZ9 215 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 PPDPFQ9H3Y8 114 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 KCNQ1DNQ9H478 68 aa4.74□□□□□ -1.65
NR1I3-235ENST00000628566 ZNF706Q9Y5V0 76 aaPredicted RBP4.74□□□□□ -1.65
NR1I3-235ENST00000628566 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
NR1I3-235ENST00000628566 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
NR1I3-235ENST00000628566 LITAFQ99732 161 aa4.73□□□□□ -1.65
NR1I3-235ENST00000628566 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms