RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 LEPROTO15243 131 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 UBE2BP63146 152 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 LINC01545Q5VT33 79 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
SOX2-OT-248ENST00000628496 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
SOX2-OT-248ENST00000628496 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
SOX2-OT-248ENST00000628496 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
SOX2-OT-248ENST00000628496 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
SOX2-OT-248ENST00000628496 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
SOX2-OT-248ENST00000628496 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 J3QQQ9 107 aa8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 LINC00158P58513 81 aa8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 HERVK_113P61574 105 aa8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
SOX2-OT-248ENST00000628496 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 OXTP01178 125 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 KRTDAPP60985 99 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 HERV-K104P63124 156 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 Q8NDZ9 215 aa8.32□□□□□ -1.08
SOX2-OT-248ENST00000628496 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
SOX2-OT-248ENST00000628496 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
SOX2-OT-248ENST00000628496 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
SOX2-OT-248ENST00000628496 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 E9PLD3 99 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 VPREB1P12018 145 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 NKAPP1Q8N9T2 125 aa8.3□□□□□ -1.08
SOX2-OT-248ENST00000628496 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
SOX2-OT-248ENST00000628496 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
SOX2-OT-248ENST00000628496 NMUP48645 174 aa8.29□□□□□ -1.08
SOX2-OT-248ENST00000628496 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
SOX2-OT-248ENST00000628496 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
SOX2-OT-248ENST00000628496 LINC00587B1AMM8 73 aa8.27□□□□□ -1.09
SOX2-OT-248ENST00000628496 HIST1H2BLQ99880 126 aa8.27□□□□□ -1.09
SOX2-OT-248ENST00000628496 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
SOX2-OT-248ENST00000628496 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
SOX2-OT-248ENST00000628496 DAND5Q8N907 189 aa8.26□□□□□ -1.09
SOX2-OT-248ENST00000628496 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
SOX2-OT-248ENST00000628496 IGKV2D-26A0A0A0MRZ7 120 aa8.25□□□□□ -1.09
SOX2-OT-248ENST00000628496 C20orf202A1L168 122 aa8.25□□□□□ -1.09
SOX2-OT-248ENST00000628496 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
SOX2-OT-248ENST00000628496 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 S100A6P06703 90 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 S100A2P29034 98 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
SOX2-OT-248ENST00000628496 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 HERC1Q15751 4861 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 H0Y9J4 135 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 BCE1O60756 84 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 DIRC1Q969H9 104 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 TTTY13Q9BZ97 58 aa8.23□□□□□ -1.09
SOX2-OT-248ENST00000628496 ZNF861PO60384 105 aa8.22□□□□□ -1.09
SOX2-OT-248ENST00000628496 SNRPEP62304 92 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-248ENST00000628496 LOC107984156A0A0G2JMH3 177 aa8.21□□□□□ -1.1
SOX2-OT-248ENST00000628496 M0R378 163 aa8.21□□□□□ -1.1
SOX2-OT-248ENST00000628496 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.1
SOX2-OT-248ENST00000628496 ARL17AQ8IVW1 177 aa8.21□□□□□ -1.1
SOX2-OT-248ENST00000628496 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
SOX2-OT-248ENST00000628496 ZNF815PA8K554 130 aa8.2□□□□□ -1.1
SOX2-OT-248ENST00000628496 TMEM238C9JI98 176 aa8.2□□□□□ -1.1
SOX2-OT-248ENST00000628496 NCR3O14931 201 aa8.2□□□□□ -1.1
SOX2-OT-248ENST00000628496 LITAFQ99732 161 aa8.2□□□□□ -1.1
SOX2-OT-248ENST00000628496 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
SOX2-OT-248ENST00000628496 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
SOX2-OT-248ENST00000628496 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
SOX2-OT-248ENST00000628496 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
SOX2-OT-248ENST00000628496 AKR1D1P51857 326 aa8.18□□□□□ -1.1
SOX2-OT-248ENST00000628496 NPC2P61916 151 aa8.18□□□□□ -1.1
SOX2-OT-248ENST00000628496 TIMM17BO60830 172 aa8.17□□□□□ -1.1
SOX2-OT-248ENST00000628496 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
SOX2-OT-248ENST00000628496 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
SOX2-OT-248ENST00000628496 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
SOX2-OT-248ENST00000628496 UBE2AP49459 152 aa8.16□□□□□ -1.1
SOX2-OT-248ENST00000628496 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
SOX2-OT-248ENST00000628496 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
SOX2-OT-248ENST00000628496 PRLHP81277 87 aa8.15□□□□□ -1.1
SOX2-OT-248ENST00000628496 FAM19A1Q7Z5A9 133 aa8.15□□□□□ -1.1
SOX2-OT-248ENST00000628496 PCP2Q8IVA1 136 aa8.15□□□□□ -1.1
SOX2-OT-248ENST00000628496 TNXBP22105 4242 aa8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 TRBV10-2A0A0K0K1G8 114 aa8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 NDUFC2O95298 119 aa8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 LINC00308Q8TCZ7 52 aa8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
SOX2-OT-248ENST00000628496 PRYO14603 147 aa8.13□□□□□ -1.11
SOX2-OT-248ENST00000628496 KCNQ1DNQ9H478 68 aa8.13□□□□□ -1.11
SOX2-OT-248ENST00000628496 SPRR1AP35321 89 aa8.12□□□□□ -1.11
SOX2-OT-248ENST00000628496 SCGB1D4Q6XE38 83 aa8.12□□□□□ -1.11
SOX2-OT-248ENST00000628496 DDTP30046 118 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms