RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 RMI2Q96E14 147 aa14.62□□□□□ -0.07
PNKP-220ENST00000627232 Q9HAA7 133 aa14.62□□□□□ -0.07
PNKP-220ENST00000627232 NBEAL1Q6ZS30 2694 aa14.62□□□□□ -0.07
PNKP-220ENST00000627232 Q6ZRU5 148 aa14.61□□□□□ -0.07
PNKP-220ENST00000627232 Q8NDZ9 215 aa14.61□□□□□ -0.07
PNKP-220ENST00000627232 NCR3O14931 201 aa14.59□□□□□ -0.07
PNKP-220ENST00000627232 TEX49A0A1B0GTD5 131 aa14.57□□□□□ -0.08
PNKP-220ENST00000627232 BAALC-AS2P0C853 105 aa14.57□□□□□ -0.08
PNKP-220ENST00000627232 S100A7L2Q5SY68 101 aa14.57□□□□□ -0.08
PNKP-220ENST00000627232 A0A087WYN8 130 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 MGAM2Q2M2H8 2515 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 A0A1B0GX51 115 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 NDUFC2-KCTD14E9PQ53 114 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 DNAL4O96015 105 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 SYCNQ0VAF6 134 aa14.56□□□□□ -0.08
PNKP-220ENST00000627232 NHLRC4P0CG21 123 aaPredicted RBP14.55□□□□□ -0.08
PNKP-220ENST00000627232 IGLV6-57P01721 117 aa14.54□□□□□ -0.08
PNKP-220ENST00000627232 XAGE1AQ9HD64 81 aa14.53□□□□□ -0.08
PNKP-220ENST00000627232 APLNQ9ULZ1 77 aa14.53□□□□□ -0.08
PNKP-220ENST00000627232 LECT2O14960 151 aa14.51□□□□□ -0.09
PNKP-220ENST00000627232 RPL18AQ02543 176 aaKnown RBP14.51□□□□□ -0.09
PNKP-220ENST00000627232 CDIP1Q9H305 208 aa14.51□□□□□ -0.09
PNKP-220ENST00000627232 SIGMAR1Q99720 223 aa14.5□□□□□ -0.09
PNKP-220ENST00000627232 USP17L23D6RBM5 183 aa14.49□□□□□ -0.09
PNKP-220ENST00000627232 VPREB1P12018 145 aa14.49□□□□□ -0.09
PNKP-220ENST00000627232 LINC00167Q96N53 147 aa14.49□□□□□ -0.09
PNKP-220ENST00000627232 C22orf24Q9Y442 160 aa14.49□□□□□ -0.09
PNKP-220ENST00000627232 C6orf99Q4VX62 202 aa14.48□□□□□ -0.09
PNKP-220ENST00000627232 TLX1NBP0CAT3 122 aa14.47□□□□□ -0.09
PNKP-220ENST00000627232 SNCGO76070 127 aa14.46□□□□□ -0.1
PNKP-220ENST00000627232 CASC10Q5T4H9 136 aa14.46□□□□□ -0.1
PNKP-220ENST00000627232 Q6ZRP5 223 aa14.46□□□□□ -0.1
PNKP-220ENST00000627232 M0R378 163 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 GAGE2EQ4V326 116 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 UBE2DNLQ8IWF7 75 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 Q8N814 137 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 ORMDL1Q9P0S3 153 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 GAGE2DQ9UEU5 116 aa14.45□□□□□ -0.1
PNKP-220ENST00000627232 TRBV10-3A0A0K0K1G6 114 aa14.44□□□□□ -0.1
PNKP-220ENST00000627232 FAM240AA0A1B0GVK7 77 aa14.43□□□□□ -0.1
PNKP-220ENST00000627232 NUPR2A6NF83 97 aa14.43□□□□□ -0.1
PNKP-220ENST00000627232 TRAV23DV6A0A075B6W5 121 aa14.42□□□□□ -0.1
PNKP-220ENST00000627232 LINC00575Q6W349 94 aa14.42□□□□□ -0.1
PNKP-220ENST00000627232 DNAH9Q9NYC9 4486 aa14.42□□□□□ -0.1
PNKP-220ENST00000627232 INAFM2P0DMQ5 153 aa14.41□□□□□ -0.1
PNKP-220ENST00000627232 SLPIP03973 132 aa14.41□□□□□ -0.1
PNKP-220ENST00000627232 C9orf129Q5T035 196 aaKnown RBP14.4□□□□□ -0.1
PNKP-220ENST00000627232 DIRC1Q969H9 104 aa14.4□□□□□ -0.1
PNKP-220ENST00000627232 TRBV7-6A0A0J9YX20 115 aa14.39□□□□□ -0.11
PNKP-220ENST00000627232 PLA2G2DQ9UNK4 145 aa14.39□□□□□ -0.11
PNKP-220ENST00000627232 PCP4P48539 62 aa14.38□□□□□ -0.11
PNKP-220ENST00000627232 KRTAP1-5Q9BYS1 174 aa14.38□□□□□ -0.11
PNKP-220ENST00000627232 OBSCN-AS1Q96MR7 158 aa14.37□□□□□ -0.11
PNKP-220ENST00000627232 ACYP1P07311 99 aa14.36□□□□□ -0.11
PNKP-220ENST00000627232 hADV29S1A0JD25 119 aa14.36□□□□□ -0.11
PNKP-220ENST00000627232 ZNF73O43830 326 aaPredicted RBP14.36□□□□□ -0.11
PNKP-220ENST00000627232 SCGB1A1P11684 91 aa14.35□□□□□ -0.11
PNKP-220ENST00000627232 XGP55808 180 aa14.35□□□□□ -0.11
PNKP-220ENST00000627232 TMEM256-PLSCR3K7ERE1 68 aa14.34□□□□□ -0.11
PNKP-220ENST00000627232 COX7BP24311 80 aa14.32□□□□□ -0.12
PNKP-220ENST00000627232 NKAPP1Q8N9T2 125 aa14.32□□□□□ -0.12
PNKP-220ENST00000627232 IGLV5-37A0A075B6J1 123 aa14.31□□□□□ -0.12
PNKP-220ENST00000627232 LOC107984640A0A0U1RRK4 108 aa14.31□□□□□ -0.12
PNKP-220ENST00000627232 H3BQ85 93 aa14.31□□□□□ -0.12
PNKP-220ENST00000627232 MT-ATP8P03928 68 aa14.31□□□□□ -0.12
PNKP-220ENST00000627232 ELOF1P60002 83 aaKnown RBP14.31□□□□□ -0.12
PNKP-220ENST00000627232 TTC32Q5I0X7 151 aa14.31□□□□□ -0.12
PNKP-220ENST00000627232 COL7A1Q02388 2944 aa14.3□□□□□ -0.12
PNKP-220ENST00000627232 DNAH1Q9P2D7 4330 aa14.29□□□□□ -0.12
PNKP-220ENST00000627232 PSCAO43653 123 aa14.29□□□□□ -0.12
PNKP-220ENST00000627232 SERTAD4-AS1Q5TG53 156 aa14.29□□□□□ -0.12
PNKP-220ENST00000627232 STAB2Q8WWQ8 2551 aa14.28□□□□□ -0.12
PNKP-220ENST00000627232 JMJD7-PLA2G4BH0Y9G9 81 aa14.27□□□□□ -0.12
PNKP-220ENST00000627232 C14orf177Q52M58 125 aa14.27□□□□□ -0.12
PNKP-220ENST00000627232 DYNC2H1Q8NCM8 4307 aaKnown RBP14.27□□□□□ -0.12
PNKP-220ENST00000627232 CNBPP62633 177 aaKnown RBP14.26□□□□□ -0.13
PNKP-220ENST00000627232 C7orf33Q8WU49 177 aa14.26□□□□□ -0.13
PNKP-220ENST00000627232 KCNQ1DNQ9H478 68 aa14.26□□□□□ -0.13
PNKP-220ENST00000627232 NBDYA0A0U1RRE5 68 aa14.25□□□□□ -0.13
PNKP-220ENST00000627232 GAGE2BQ13066 116 aa14.25□□□□□ -0.13
PNKP-220ENST00000627232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.25□□□□□ -0.13
PNKP-220ENST00000627232 C14orf132Q9NPU4 83 aa14.25□□□□□ -0.13
PNKP-220ENST00000627232 GHRHP01286 108 aa14.22□□□□□ -0.13
PNKP-220ENST00000627232 GAGE2AQ6NT46 116 aa14.22□□□□□ -0.13
PNKP-220ENST00000627232 LINC00528Q8N1L1 170 aa14.22□□□□□ -0.13
PNKP-220ENST00000627232 Q6ZQY7 126 aa14.21□□□□□ -0.13
PNKP-220ENST00000627232 SDIM1Q6ZPB5 146 aa14.2□□□□□ -0.14
PNKP-220ENST00000627232 PRYO14603 147 aa14.19□□□□□ -0.14
PNKP-220ENST00000627232 FAM168BA1KXE4 195 aa14.18□□□□□ -0.14
PNKP-220ENST00000627232 KRTAP21-3Q3LHN1 58 aa14.18□□□□□ -0.14
PNKP-220ENST00000627232 IGLV1-50A0A075B6I6 118 aa14.17□□□□□ -0.14
PNKP-220ENST00000627232 KRTAP7-1Q8IUC3 87 aa14.17□□□□□ -0.14
PNKP-220ENST00000627232 C16orf90A8MZG2 172 aa14.15□□□□□ -0.14
PNKP-220ENST00000627232 CCKP06307 115 aa14.15□□□□□ -0.14
PNKP-220ENST00000627232 C21orf62-AS1Q17RA5 79 aa14.15□□□□□ -0.14
PNKP-220ENST00000627232 Q6Q795 121 aa14.15□□□□□ -0.14
PNKP-220ENST00000627232 MRPL55Q7Z7F7 128 aaKnown RBP14.14□□□□□ -0.15
PNKP-220ENST00000627232 LINC00643Q86TS7 51 aa14.14□□□□□ -0.15
PNKP-220ENST00000627232 LRCOL1A6NCL2 159 aa14.13□□□□□ -0.15
PNKP-220ENST00000627232 SPRR1AP35321 89 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms