RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
SNRPA1-216ENST00000626000 C20orf202A1L168 122 aa8.67□□□□□ -1.02
SNRPA1-216ENST00000626000 REG3GQ6UW15 175 aa8.67□□□□□ -1.02
SNRPA1-216ENST00000626000 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-216ENST00000626000 C22orf24Q9Y442 160 aa8.67□□□□□ -1.02
SNRPA1-216ENST00000626000 LINC00158P58513 81 aa8.66□□□□□ -1.02
SNRPA1-216ENST00000626000 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
SNRPA1-216ENST00000626000 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
SNRPA1-216ENST00000626000 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
SNRPA1-216ENST00000626000 J3QQQ9 107 aa8.65□□□□□ -1.02
SNRPA1-216ENST00000626000 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-216ENST00000626000 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
SNRPA1-216ENST00000626000 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
SNRPA1-216ENST00000626000 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
SNRPA1-216ENST00000626000 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-216ENST00000626000 E9PLD3 99 aa8.63□□□□□ -1.03
SNRPA1-216ENST00000626000 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
SNRPA1-216ENST00000626000 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNRPA1-216ENST00000626000 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
SNRPA1-216ENST00000626000 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
SNRPA1-216ENST00000626000 S100A6P06703 90 aa8.62□□□□□ -1.03
SNRPA1-216ENST00000626000 MYCBP2O75592 4640 aa8.62□□□□□ -1.03
SNRPA1-216ENST00000626000 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
SNRPA1-216ENST00000626000 S100A2P29034 98 aa8.61□□□□□ -1.03
SNRPA1-216ENST00000626000 KRTDAPP60985 99 aa8.61□□□□□ -1.03
SNRPA1-216ENST00000626000 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
SNRPA1-216ENST00000626000 HERC1Q15751 4861 aa8.59□□□□□ -1.03
SNRPA1-216ENST00000626000 VPREB1P12018 145 aa8.59□□□□□ -1.03
SNRPA1-216ENST00000626000 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
SNRPA1-216ENST00000626000 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
SNRPA1-216ENST00000626000 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 BCE1O60756 84 aa8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 SNRPEP62304 92 aaKnown RBP8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
SNRPA1-216ENST00000626000 S100A12P80511 92 aa8.57□□□□□ -1.04
SNRPA1-216ENST00000626000 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
SNRPA1-216ENST00000626000 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 A0A0U1RRA0 63 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 H0Y9J4 135 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 ZNF861PO60384 105 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
SNRPA1-216ENST00000626000 GAGE10A6NGK3 116 aa8.55□□□□□ -1.04
SNRPA1-216ENST00000626000 RPL37AP8A6NKH3 93 aa8.55□□□□□ -1.04
SNRPA1-216ENST00000626000 M0R378 163 aa8.55□□□□□ -1.04
SNRPA1-216ENST00000626000 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
SNRPA1-216ENST00000626000 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
SNRPA1-216ENST00000626000 TIMM17BO60830 172 aa8.54□□□□□ -1.04
SNRPA1-216ENST00000626000 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
SNRPA1-216ENST00000626000 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
SNRPA1-216ENST00000626000 HIST1H2BLQ99880 126 aa8.53□□□□□ -1.04
SNRPA1-216ENST00000626000 IGKV2-28A0A075B6P5 120 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 NDUFC2O95298 119 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 IGKV2D-28P01615 120 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 UBE2AP49459 152 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 CBY1Q9Y3M2 126 aa8.52□□□□□ -1.05
SNRPA1-216ENST00000626000 HSBP1L1C9JCN9 74 aa8.51□□□□□ -1.05
SNRPA1-216ENST00000626000 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
SNRPA1-216ENST00000626000 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
SNRPA1-216ENST00000626000 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
SNRPA1-216ENST00000626000 PRYO14603 147 aa8.49□□□□□ -1.05
SNRPA1-216ENST00000626000 RPL13AP40429 203 aaKnown RBP8.49□□□□□ -1.05
SNRPA1-216ENST00000626000 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
SNRPA1-216ENST00000626000 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
SNRPA1-216ENST00000626000 DAND5Q8N907 189 aa8.48□□□□□ -1.05
SNRPA1-216ENST00000626000 NCR3O14931 201 aa8.47□□□□□ -1.05
SNRPA1-216ENST00000626000 Q6ZVH6 145 aa8.47□□□□□ -1.05
SNRPA1-216ENST00000626000 Q8NDZ9 215 aa8.47□□□□□ -1.05
SNRPA1-216ENST00000626000 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
SNRPA1-216ENST00000626000 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
SNRPA1-216ENST00000626000 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
SNRPA1-216ENST00000626000 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
SNRPA1-216ENST00000626000 FAT3Q8TDW7 4589 aa8.44□□□□□ -1.06
SNRPA1-216ENST00000626000 DDTP30046 118 aa8.44□□□□□ -1.06
SNRPA1-216ENST00000626000 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
SNRPA1-216ENST00000626000 ANKRD39Q53RE8 183 aa8.44□□□□□ -1.06
SNRPA1-216ENST00000626000 LITAFQ99732 161 aa8.44□□□□□ -1.06
SNRPA1-216ENST00000626000 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 ETDCA0A1B0GVM5 59 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 IFITM1P13164 125 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 SPRR1AP35321 89 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 LINC00518Q8N0U6 118 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
SNRPA1-216ENST00000626000 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
SNRPA1-216ENST00000626000 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
SNRPA1-216ENST00000626000 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms