RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 KRTDAPP60985 99 aa8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 HERVK_113P61574 105 aa8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 HERV-K104P63124 156 aa8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 Q8NDZ9 215 aa8.9□□□□□ -0.98
SOX2-OT-237ENST00000625581 E9PLD3 99 aa8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 SMIM13P0DJ93 91 aa8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 UBE2BP63146 152 aa8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 MRPL55Q7Z7F7 128 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 HIST3H2BBQ8N257 126 aa8.89□□□□□ -0.99
SOX2-OT-237ENST00000625581 A0A0U1RRA0 63 aa8.88□□□□□ -0.99
SOX2-OT-237ENST00000625581 MYMXA0A1B0GTQ4 84 aa8.88□□□□□ -0.99
SOX2-OT-237ENST00000625581 VPREB1P12018 145 aa8.88□□□□□ -0.99
SOX2-OT-237ENST00000625581 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
SOX2-OT-237ENST00000625581 LINC00158P58513 81 aa8.87□□□□□ -0.99
SOX2-OT-237ENST00000625581 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
SOX2-OT-237ENST00000625581 OXTP01178 125 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 LGALS3P17931 250 aaKnown RBP8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 NMUP48645 174 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
SOX2-OT-237ENST00000625581 MIR7-3HGQ8N6C7 128 aa8.85□□□□□ -0.99
SOX2-OT-237ENST00000625581 GAGE10A6NGK3 116 aa8.84□□□□□ -0.99
SOX2-OT-237ENST00000625581 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
SOX2-OT-237ENST00000625581 TNXBP22105 4242 aa8.84□□□□□ -0.99
SOX2-OT-237ENST00000625581 IGKV2D-26A0A0A0MRZ7 120 aa8.83□□□□□ -1
SOX2-OT-237ENST00000625581 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
SOX2-OT-237ENST00000625581 C20orf202A1L168 122 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 LINC00587B1AMM8 73 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 J3QL48 77 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 S100A6P06703 90 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 MT1HL1P0DM35 61 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 DAND5Q8N907 189 aa8.82□□□□□ -1
SOX2-OT-237ENST00000625581 A0A0J9YXY3 114 aa8.81□□□□□ -1
SOX2-OT-237ENST00000625581 S100A2P29034 98 aa8.81□□□□□ -1
SOX2-OT-237ENST00000625581 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
SOX2-OT-237ENST00000625581 ATOH7Q8N100 152 aa8.81□□□□□ -1
SOX2-OT-237ENST00000625581 SNRPEP62304 92 aaKnown RBP8.8□□□□□ -1
SOX2-OT-237ENST00000625581 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
SOX2-OT-237ENST00000625581 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
SOX2-OT-237ENST00000625581 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 C5orf52A6NGY3 159 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 IGKV2D-28P01615 120 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 BOD1L2Q8IYS8 172 aa8.79□□□□□ -1
SOX2-OT-237ENST00000625581 H0Y9J4 135 aa8.78□□□□□ -1
SOX2-OT-237ENST00000625581 BCE1O60756 84 aa8.78□□□□□ -1
SOX2-OT-237ENST00000625581 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
SOX2-OT-237ENST00000625581 LINC01600Q96MT4 127 aa8.78□□□□□ -1
SOX2-OT-237ENST00000625581 LITAFQ99732 161 aa8.78□□□□□ -1
SOX2-OT-237ENST00000625581 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
SOX2-OT-237ENST00000625581 DIRC1Q969H9 104 aa8.77□□□□□ -1.01
SOX2-OT-237ENST00000625581 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 NCR3O14931 201 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 ZNF861PO60384 105 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 AKR1D1P51857 326 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
SOX2-OT-237ENST00000625581 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
SOX2-OT-237ENST00000625581 M0R378 163 aa8.75□□□□□ -1.01
SOX2-OT-237ENST00000625581 TIMM17BO60830 172 aa8.74□□□□□ -1.01
SOX2-OT-237ENST00000625581 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
SOX2-OT-237ENST00000625581 KRTAP1-4P0C5Y4 121 aa8.73□□□□□ -1.01
SOX2-OT-237ENST00000625581 NPC2P61916 151 aa8.72□□□□□ -1.01
SOX2-OT-237ENST00000625581 PCP2Q8IVA1 136 aa8.72□□□□□ -1.01
SOX2-OT-237ENST00000625581 NDUFC2O95298 119 aa8.71□□□□□ -1.02
SOX2-OT-237ENST00000625581 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-237ENST00000625581 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SOX2-OT-237ENST00000625581 MIEN1Q9BRT3 115 aa8.71□□□□□ -1.02
SOX2-OT-237ENST00000625581 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-237ENST00000625581 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
SOX2-OT-237ENST00000625581 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
SOX2-OT-237ENST00000625581 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
SOX2-OT-237ENST00000625581 PRYO14603 147 aa8.69□□□□□ -1.02
SOX2-OT-237ENST00000625581 UBE2AP49459 152 aa8.69□□□□□ -1.02
SOX2-OT-237ENST00000625581 PRLHP81277 87 aa8.69□□□□□ -1.02
SOX2-OT-237ENST00000625581 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
SOX2-OT-237ENST00000625581 SPRR1AP35321 89 aa8.68□□□□□ -1.02
SOX2-OT-237ENST00000625581 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
SOX2-OT-237ENST00000625581 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
SOX2-OT-237ENST00000625581 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
SOX2-OT-237ENST00000625581 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
SOX2-OT-237ENST00000625581 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
SOX2-OT-237ENST00000625581 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
SOX2-OT-237ENST00000625581 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
SOX2-OT-237ENST00000625581 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
SOX2-OT-237ENST00000625581 DDTP30046 118 aa8.65□□□□□ -1.02
SOX2-OT-237ENST00000625581 LINC00337Q8N6G1 96 aa8.65□□□□□ -1.02
SOX2-OT-237ENST00000625581 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
SOX2-OT-237ENST00000625581 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-237ENST00000625581 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
SOX2-OT-237ENST00000625581 HMCN2Q8NDA2 5059 aa8.62□□□□□ -1.03
SOX2-OT-237ENST00000625581 A0A087X002 238 aa8.61□□□□□ -1.03
SOX2-OT-237ENST00000625581 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms