RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 PRR3P79522 188 aaKnown RBP13.49□□□□□ -0.25
UBAP1-204ENST00000625521 C9orf116Q5BN46 136 aaPredicted RBP13.49□□□□□ -0.25
UBAP1-204ENST00000625521 ANAPC13Q9BS18 74 aa13.49□□□□□ -0.25
UBAP1-204ENST00000625521 KLK5Q9Y337 293 aaPredicted RBP13.49□□□□□ -0.25
UBAP1-204ENST00000625521 DNAL4O96015 105 aa13.48□□□□□ -0.25
UBAP1-204ENST00000625521 NDUFV3P56181 108 aaKnown RBP13.48□□□□□ -0.25
UBAP1-204ENST00000625521 SMCR5Q8TEV8 140 aa13.48□□□□□ -0.25
UBAP1-204ENST00000625521 LINC00588Q9Y4M8 146 aa13.48□□□□□ -0.25
UBAP1-204ENST00000625521 LECT2O14960 151 aa13.47□□□□□ -0.25
UBAP1-204ENST00000625521 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
UBAP1-204ENST00000625521 NDUFC2O95298 119 aa13.47□□□□□ -0.25
UBAP1-204ENST00000625521 SDIM1Q6ZPB5 146 aa13.47□□□□□ -0.25
UBAP1-204ENST00000625521 TRBV7-7A0A0K0K1E9 115 aa13.46□□□□□ -0.26
UBAP1-204ENST00000625521 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.26
UBAP1-204ENST00000625521 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.26
UBAP1-204ENST00000625521 Q8NDZ9 215 aa13.45□□□□□ -0.26
UBAP1-204ENST00000625521 OBSCN-AS1Q96MR7 158 aa13.44□□□□□ -0.26
UBAP1-204ENST00000625521 SPAG11BQ08648 103 aa13.44□□□□□ -0.26
UBAP1-204ENST00000625521 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
UBAP1-204ENST00000625521 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
UBAP1-204ENST00000625521 UPK3BQ9BT76 320 aa13.43□□□□□ -0.26
UBAP1-204ENST00000625521 DNHD1Q96M86 4753 aa13.42□□□□□ -0.26
UBAP1-204ENST00000625521 KRTAP26-1Q6PEX3 210 aa13.42□□□□□ -0.26
UBAP1-204ENST00000625521 C1orf43Q9BWL3 253 aa13.42□□□□□ -0.26
UBAP1-204ENST00000625521 SLPIP03973 132 aa13.42□□□□□ -0.26
UBAP1-204ENST00000625521 UNQ6190/PRO20217Q6UXQ8 127 aa13.41□□□□□ -0.26
UBAP1-204ENST00000625521 COL7A1Q02388 2944 aa13.41□□□□□ -0.26
UBAP1-204ENST00000625521 LINC00167Q96N53 147 aa13.4□□□□□ -0.26
UBAP1-204ENST00000625521 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
UBAP1-204ENST00000625521 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
UBAP1-204ENST00000625521 LINC00643Q86TS7 51 aa13.39□□□□□ -0.27
UBAP1-204ENST00000625521 TMEM126AQ9H061 195 aa13.39□□□□□ -0.27
UBAP1-204ENST00000625521 C14orf132Q9NPU4 83 aa13.37□□□□□ -0.27
UBAP1-204ENST00000625521 IGKV2D-24A0A075B6R9 120 aa13.37□□□□□ -0.27
UBAP1-204ENST00000625521 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
UBAP1-204ENST00000625521 A0A1B0GX51 115 aa13.36□□□□□ -0.27
UBAP1-204ENST00000625521 NCR3O14931 201 aa13.36□□□□□ -0.27
UBAP1-204ENST00000625521 ORMDL1Q9P0S3 153 aa13.36□□□□□ -0.27
UBAP1-204ENST00000625521 Q8N814 137 aa13.35□□□□□ -0.27
UBAP1-204ENST00000625521 IMUPQ9GZP8 106 aa13.35□□□□□ -0.27
UBAP1-204ENST00000625521 APLNQ9ULZ1 77 aa13.35□□□□□ -0.27
UBAP1-204ENST00000625521 MUC7Q8TAX7 377 aa13.34□□□□□ -0.27
UBAP1-204ENST00000625521 ZNF561-AS1K7EIQ3 104 aa13.34□□□□□ -0.27
UBAP1-204ENST00000625521 GVQW2A0A096LPI5 108 aaPredicted RBP13.32□□□□□ -0.28
UBAP1-204ENST00000625521 NUPR2A6NF83 97 aa13.32□□□□□ -0.28
UBAP1-204ENST00000625521 C6orf99Q4VX62 202 aa13.32□□□□□ -0.28
UBAP1-204ENST00000625521 C15orf56Q8N910 161 aa13.32□□□□□ -0.28
UBAP1-204ENST00000625521 RMI2Q96E14 147 aa13.31□□□□□ -0.28
UBAP1-204ENST00000625521 C6orf48Q9UBA6 75 aa13.3□□□□□ -0.28
UBAP1-204ENST00000625521 CCDC179H3BU77 68 aa13.3□□□□□ -0.28
UBAP1-204ENST00000625521 HIGD2BQ4VC39 106 aa13.3□□□□□ -0.28
UBAP1-204ENST00000625521 DYNC2H1Q8NCM8 4307 aaKnown RBP13.3□□□□□ -0.28
UBAP1-204ENST00000625521 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
UBAP1-204ENST00000625521 S100A7L2Q5SY68 101 aa13.29□□□□□ -0.28
UBAP1-204ENST00000625521 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
UBAP1-204ENST00000625521 F8WDY8 70 aa13.28□□□□□ -0.28
UBAP1-204ENST00000625521 UBE2DNLQ8IWF7 75 aa13.28□□□□□ -0.28
UBAP1-204ENST00000625521 CAMK2N2Q96S95 79 aa13.28□□□□□ -0.28
UBAP1-204ENST00000625521 IGLV6-57P01721 117 aa13.27□□□□□ -0.28
UBAP1-204ENST00000625521 LINC00846Q9NV44 126 aa13.27□□□□□ -0.29
UBAP1-204ENST00000625521 FAM236AA0A1B0GUQ0 79 aa13.26□□□□□ -0.29
UBAP1-204ENST00000625521 FAM236BA0A1B0GV22 79 aa13.26□□□□□ -0.29
UBAP1-204ENST00000625521 LINC00575Q6W349 94 aa13.26□□□□□ -0.29
UBAP1-204ENST00000625521 TMEM256-PLSCR3K7ERE1 68 aa13.25□□□□□ -0.29
UBAP1-204ENST00000625521 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
UBAP1-204ENST00000625521 PRKDCP78527 4128 aaKnown RBP13.25□□□□□ -0.29
UBAP1-204ENST00000625521 DNAH1Q9P2D7 4330 aa13.23□□□□□ -0.29
UBAP1-204ENST00000625521 B5MCH6 92 aa13.23□□□□□ -0.29
UBAP1-204ENST00000625521 CCKP06307 115 aa13.22□□□□□ -0.29
UBAP1-204ENST00000625521 JMJD7-PLA2G4BH0Y9G9 81 aa13.22□□□□□ -0.29
UBAP1-204ENST00000625521 Q6ZRU5 148 aa13.22□□□□□ -0.29
UBAP1-204ENST00000625521 XAGE1AQ9HD64 81 aa13.22□□□□□ -0.29
UBAP1-204ENST00000625521 TRBV10-3A0A0K0K1G6 114 aa13.19□□□□□ -0.3
UBAP1-204ENST00000625521 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
UBAP1-204ENST00000625521 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
UBAP1-204ENST00000625521 Q6JHZ5 121 aa13.18□□□□□ -0.3
UBAP1-204ENST00000625521 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
UBAP1-204ENST00000625521 KRTAP1-5Q9BYS1 174 aa13.17□□□□□ -0.3
UBAP1-204ENST00000625521 CASC10Q5T4H9 136 aa13.17□□□□□ -0.3
UBAP1-204ENST00000625521 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
UBAP1-204ENST00000625521 NDUFC2-KCTD14E9PQ53 114 aa13.15□□□□□ -0.3
UBAP1-204ENST00000625521 HIST1H4AP62805 103 aaKnown RBP13.15□□□□□ -0.3
UBAP1-204ENST00000625521 TRAV23DV6A0A075B6W5 121 aa13.15□□□□□ -0.3
UBAP1-204ENST00000625521 IGKV3D-7A0A0C4DH55 119 aa13.15□□□□□ -0.3
UBAP1-204ENST00000625521 VPREB1P12018 145 aa13.14□□□□□ -0.31
UBAP1-204ENST00000625521 PLECQ15149 4684 aaKnown RBP13.14□□□□□ -0.31
UBAP1-204ENST00000625521 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
UBAP1-204ENST00000625521 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
UBAP1-204ENST00000625521 DIRC1Q969H9 104 aa13.12□□□□□ -0.31
UBAP1-204ENST00000625521 LYSTQ99698 3801 aa13.12□□□□□ -0.31
UBAP1-204ENST00000625521 ZNF73O43830 326 aaPredicted RBP13.1□□□□□ -0.31
UBAP1-204ENST00000625521 Q6ZQY7 126 aa13.1□□□□□ -0.31
UBAP1-204ENST00000625521 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.31
UBAP1-204ENST00000625521 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.31
UBAP1-204ENST00000625521 PSCAO43653 123 aa13.08□□□□□ -0.32
UBAP1-204ENST00000625521 Q6ZQT0 140 aa13.08□□□□□ -0.32
UBAP1-204ENST00000625521 Q6ZRP5 223 aa13.08□□□□□ -0.32
UBAP1-204ENST00000625521 RBM3P98179 157 aaKnown RBP13.07□□□□□ -0.32
UBAP1-204ENST00000625521 LOC110117498A0A087WWA1 95 aa13.06□□□□□ -0.32
UBAP1-204ENST00000625521 ELOF1P60002 83 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms